Effective results for Lactobacillus kefiranofaciens ZW3 (eggnog40)

Summary

Number of putative secreted proteins: 43
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 43 proteins (0 high, 43 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1033837.WANG_0039(PF12323)mitochondrial
1033837.WANG_0224(PF12323)mitochondrial
1033837.WANG_1070(PF12323)(mitochondrial)
1033837.WANG_0317(PF12323)(mitochondrial)
1033837.WANG_1686(PF12323)mitochondrial
1033837.WANG_0248(PF05935)ER
1033837.WANG_1750(PF12323)(mitochondrial)
1033837.WANG_1381(PF12323)(mitochondrial)
1033837.WANG_0599(PF12323)(mitochondrial)
1033837.WANG_0183(PF12588)
1033837.WANG_1103(PF13936)
1033837.WANG_0290(PF12323)
1033837.WANG_1817(PF03051)
1033837.WANG_1742(PF13936)
1033837.WANG_0282(PF06838)
1033837.WANG_0998(PF06100)
1033837.WANG_1827(PF03051)
1033837.WANG_0166(PF01637)
1033837.WANG_1166(PF01637)
1033837.WANG_1532(PF05935)
1033837.WANG_1748(PF13936)
1033837.WANG_1858(PF03577)
1033837.WANG_1701(PF05014)
1033837.WANG_1638(PF01501)
1033837.WANG_1639(PF01501)
1033837.WANG_1637(PF01501)
1033837.WANG_1726(PF13936)
1033837.WANG_1727(PF13936)
1033837.WANG_0043(PF03051)
1033837.WANG_0675(PF06838)
1033837.WANG_1651(PF12323)
1033837.WANG_1784(PF13936)
1033837.WANG_1783(PF13936)
1033837.WANG_1220(PF03577)
1033837.WANG_0319(PF05014)
1033837.WANG_0886(PF12323)
1033837.WANG_0329(PF13936)
1033837.WANG_1128(PF13936)
1033837.WANG_0412(PF03577)
1033837.WANG_1347(PF01637)
1033837.WANG_1208(PF05014)
1033837.WANG_1115(PF06100)
1033837.WANG_0752(PF03051)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================