Effective results for Xanthomonas campestris pv. campestris str. ATCC 33913 (eggnog40)

Summary

Number of putative secreted proteins: 705
- Predicted by EffectiveT3: 196 (high confidence), 298 (low confidence)
- Predicted by EffectiveCCBD: 6 within, 7 before, 27 behind expected region 25..70aa
- Predicted by T4SEpre: 58
- Predicted by EffectiveELD: 31 eukaryotic-like domains, contained in 144 proteins (75 high, 69 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, Type IV, (Type VI)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
190485.XCC0400PF13276 PF13683(mitochondrial)
190485.XCC3576PF13276 PF13683(mitochondrial)
190485.XCC2576(PF05649) (PF01431)ER
190485.XCC2575(PF05649) (PF01431)ER
190485.XCC3218PF13276 PF13683(mitochondrial)
190485.XCC3671(PF05649) (PF01431)ER
190485.XCC3463PF13276 PF13683(mitochondrial)
190485.XCC0007+(PF09295)ER
190485.XCC2710(PF05649) (PF01431)ER
190485.XCC3139PF13276 PF13683(mitochondrial)
190485.XCC0560PF13276 PF13683mitochondrial
190485.XCC2035(PF05649) (PF01431)ER
190485.XCC2942(PF10142)ER
190485.XCC1142+ER
190485.XCC3548(PF00930)ER
190485.XCC3307PF13276 PF13683(plastid)
190485.XCC1452+mitochondrial
190485.XCC1455PF13276 PF13683(plastid)
190485.XCC0890+(mitochondrial)
190485.XCC3768++(plastid)
190485.XCC0538+ER
190485.XCC2792(>)ER
190485.XCC1592+(mitochondrial)
190485.XCC1668(+)+(mitochondrial)
190485.XCC1667+ER
190485.XCC3193(PF08332)ER
190485.XCC4015+(mitochondrial); (plastid)
190485.XCC3961(PF00930)ER
190485.XCC3960+(PF08695)(plastid)
190485.XCC2618+ER
190485.XCC2974++(plastid)
190485.XCC0336+ER
190485.XCC0428(PF07653)(mitochondrial); mitochondrial
190485.XCC1118+(ER); (plastid)
190485.XCC1672(>)(ER); (mitochondrial)
190485.XCC2374+mitochondrial; (plastid)
190485.XCC0049(PF08975)(ER)
190485.XCC2292(>)ER
190485.XCC0673(<)ER
190485.XCC3508(PF08212)ER
190485.XCC3233+(mitochondrial)
190485.XCC1817+(mitochondrial)
190485.XCC4162(>)mitochondrial; (mitochondrial)
190485.XCC0440+mitochondrial; (mitochondrial)
190485.XCC0287+(mitochondrial)
190485.XCC2132+(mitochondrial)
190485.XCC1628PF13276 PF13683(plastid)
190485.XCC2698+(mitochondrial); plastid
190485.XCC4016(PF00930)ER
190485.XCC3871(PF01163)mitochondrial
190485.XCC2430(PF08212)ER
190485.XCC1633PF13276mitochondrial; (mitochondrial)
190485.XCC3380(PF01670)ER
190485.XCC3532+(mitochondrial)
190485.XCC1029(>)mitochondrial
190485.XCC2397(PF00930)mitochondrial
190485.XCC0865+(ER)
190485.XCC3114PF13276mitochondrial; (mitochondrial)
190485.XCC3284+mitochondrial; (mitochondrial)
190485.XCC2897PF13276mitochondrial; (mitochondrial)
190485.XCC3908(<)ER
190485.XCC1031+(mitochondrial)
190485.XCC3271+ER
190485.XCC4123(PF08212)ER
190485.XCC4126+(mitochondrial)
190485.XCC1942+(mitochondrial); plastid
190485.XCC2405(PF00930)(ER)
190485.XCC2255+(mitochondrial)
190485.XCC3131+(ER)
190485.XCC2872+(ER); (plastid)
190485.XCC2265+ER
190485.XCC3580PF13276 PF13683(plastid)
190485.XCC3582PF13276mitochondrial; (mitochondrial)
190485.XCC3635+(mitochondrial); plastid
190485.XCC2315+ER
190485.XCC3128(<)ER
190485.XCC0226+mitochondrial
190485.XCC4210+ER
190485.XCC4051+(ER)
190485.XCC1179+(mitochondrial); (plastid)
190485.XCC1795PF13276 PF13683plastid
190485.XCC3480PF13276mitochondrial; (mitochondrial)
190485.XCC0827(PF08332)ER
190485.XCC2332(>)ER
190485.XCC1224+mitochondrial
190485.XCC3036(>)ER
190485.XCC1545+(ER)
190485.XCC1945(>)ER
190485.XCC1941+(>)plastid
190485.XCC3952+mitochondrial
190485.XCC1440+ER
190485.XCC1940+plastid
190485.XCC1365(+)mitochondrial
190485.XCC1209PF01609 (PF05598)
190485.XCC1201+(ER)
190485.XCC0570PF01609 (PF05598)
190485.XCC0638PF01609 (PF05598)
190485.XCC3303PF01609 (PF05598)
190485.XCC2490PF01609 (PF05598)
190485.XCC2492++
190485.XCC1454PF01609 (PF05598)
190485.XCC1928+plastid
190485.XCC1217++
190485.XCC1685+(ER)
190485.XCC0535PF01609 (PF05598)
190485.XCC3378(PF14686) PF09284
190485.XCC3379+(PF14683)
190485.XCC0329(+)(mitochondrial)
190485.XCC2369+(plastid)
190485.XCC0616+(ER)
190485.XCC3367(+)(mitochondrial)
190485.XCC2105PF01609 (PF05598)
190485.XCC1674+(>)
190485.XCC3214PF01609 (PF05598)
190485.XCC3745(+)(>)
190485.XCC2583(+)(ER); plastid
190485.XCC2574(PF05649) (PF01431)
190485.XCC2772(+)ER
190485.XCC0609PF01609(mitochondrial); not used
190485.XCC3518(+)ER
190485.XCC1248PF01609 (PF05598)
190485.XCC4192PF01609 (PF05598)
190485.XCC0524+plastid
190485.XCC0576(+)ER
190485.XCC3343PF01609 (PF05598)
190485.XCC0852(+)(mitochondrial)
190485.XCC1255PF01609 (PF05598)
190485.XCC3063(+)(ER); (plastid)
190485.XCC0288+(plastid)
190485.XCC1006(+)(ER)
190485.XCC3867(+)(ER)
190485.XCC3401+(mitochondrial)
190485.XCC3087(+)ER; (ER)
190485.XCC3392+(mitochondrial)
190485.XCC3897++
190485.XCC0472+(plastid)
190485.XCC3875(PF08212)(mitochondrial)
190485.XCC3707+(plastid)
190485.XCC3675(+)(mitochondrial); (plastid)
190485.XCC0127PF01609 (PF05598)
190485.XCC0005+plastid
190485.XCC3848(>)(plastid)
190485.XCC2896+(PF02902)
190485.XCC1609PF01609 (PF05598)
190485.XCC3280(+)(mitochondrial); (plastid)
190485.XCC2709PF01609 (PF05598)
190485.XCC0928+(mitochondrial)
190485.XCC4120+(plastid)
190485.XCC0241++
190485.XCC4231(+)(mitochondrial)
190485.XCC1943+mitochondrial
190485.XCC1753(+)ER; (ER)
190485.XCC2403+(plastid)
190485.XCC2400+(ER)
190485.XCC3627PF01609 (PF05598)
190485.XCC0021(+)(mitochondrial)
190485.XCC4050(+)mitochondrial; plastid
190485.XCC0232+(plastid)
190485.XCC0346+(plastid)
190485.XCC2470PF01609 (PF05598)
190485.XCC0769(+)(mitochondrial); (plastid)
190485.XCC3585PF01609 (PF05598)
190485.XCC3586PF01609 (PF05598)
190485.XCC2055(+)ER; (mitochondrial)
190485.XCC0832+(mitochondrial)
190485.XCC1415+(plastid)
190485.XCC0839(+)(ER); plastid
190485.XCC3125PF13276(plastid)
190485.XCC3122PF01609 (PF05598)
190485.XCC4107(+)ER
190485.XCC0228+(>)
190485.XCC4214(+)(mitochondrial); plastid
190485.XCC1797PF01609 (PF05598)
190485.XCC0823(+)(mitochondrial)
190485.XCC2038+plastid
190485.XCC1638PF01609 (PF05598)
190485.XCC2447(+)(mitochondrial)
190485.XCC0553(<)+
190485.XCC3557+(mitochondrial)
190485.XCC3558+plastid
190485.XCC3318+plastid
190485.XCC1449(+)(mitochondrial)
190485.XCC3771+
190485.XCC3005+
190485.XCC4034+
190485.XCC1935(+)(mitochondrial)
190485.XCC0155+
190485.XCC1093+
190485.XCC0309+
190485.XCC1206+
190485.XCC3493(+)+
190485.XCC2336+
190485.XCC2231+
190485.XCC0676(+)(plastid)
190485.XCC2789+
190485.XCC2784+
190485.XCC4094+
190485.XCC3306(PF01527)
190485.XCC3300(PF01764)
190485.XCC2169+
190485.XCC2160+
190485.XCC1456(PF01527)
190485.XCC2510(+)(plastid)
190485.XCC0092+
190485.XCC3974+
190485.XCC0110+
190485.XCC1215+
190485.XCC1138+
190485.XCC0401+
190485.XCC1045+
190485.XCC1042(PF16387)
190485.XCC0533(PF01527)
190485.XCC0534PF13276
190485.XCC3571PF01609
190485.XCC3572(PF01527)
190485.XCC3573PF13683
190485.XCC3575(PF01527)
190485.XCC3578PF01609
190485.XCC2797(+)(plastid)
190485.XCC1591+
190485.XCC0626+
190485.XCC3371+
190485.XCC3376(+)(mitochondrial)
190485.XCC3377PF09284
190485.XCC3196PF01609
190485.XCC3199PF01609
190485.XCC0953(<)
190485.XCC3683+
190485.XCC2816PF01609
190485.XCC1912+
190485.XCC2961(+)(mitochondrial)
190485.XCC1265(+)(ER)
190485.XCC0433+
190485.XCC1696+
190485.XCC2566+
190485.XCC1585+
190485.XCC1584+
190485.XCC0610PF13683
190485.XCC0611(PF01527)
190485.XCC2365+
190485.XCC0612(PF01527)not used
190485.XCC3362+
190485.XCC2102(PF13455)
190485.XCC2103+
190485.XCC2109+
190485.XCC1678(+)(ER)
190485.XCC3567+
190485.XCC2615+
190485.XCC1971+
190485.XCC1902(>)
190485.XCC1906+
190485.XCC0180+
190485.XCC1873+
190485.XCC1085+
190485.XCC0333(+)(mitochondrial)
190485.XCC0332+not used
190485.XCC0337+
190485.XCC0334+not used
190485.XCC0338+
190485.XCC1112+
190485.XCC2770(+)(>)
190485.XCC0931+
190485.XCC1953(>)
190485.XCC0607PF01609
190485.XCC3428+
190485.XCC2110+
190485.XCC3217(PF01527)
190485.XCC1648(+)(plastid)
190485.XCC1641PF01609
190485.XCC3732(PF01527)
190485.XCC3733PF13276
190485.XCC3224+
190485.XCC2603+
190485.XCC2602(+)(plastid)
190485.XCC0198+
190485.XCC2512(<)
190485.XCC2903+
190485.XCC2907+
190485.XCC1809+
190485.XCC1400+
190485.XCC3950+
190485.XCC1240+
190485.XCC1243+
190485.XCC4190PF01609
190485.XCC1079+
190485.XCC3543+
190485.XCC2425+
190485.XCC0679(+)(plastid)
190485.XCC1490+
190485.XCC3727+
190485.XCC3819+
190485.XCC2910+
190485.XCC0186(>)
190485.XCC3881+
190485.XCC3883+
190485.XCC4166+
190485.XCC4163+
190485.XCC0449(+)+
190485.XCC2753+
190485.XCC2283+
190485.XCC1451(>)
190485.XCC1512+
190485.XCC1515+
190485.XCC1627(PF01527)
190485.XCC3242+
190485.XCC3247+
190485.XCC2620+
190485.XCC3084(+)(ER)
190485.XCC3866+
190485.XCC0065+
190485.XCC4175+
190485.XCC4173(+)(mitochondrial)
190485.XCC4172(+)plastid
190485.XCC0278(>)
190485.XCC4224(>)
190485.XCC2722+
190485.XCC2343+
190485.XCC2212+
190485.XCC2213+
190485.XCC4185(+)(plastid)
190485.XCC0492+
190485.XCC1635(PF13086)
190485.XCC1634(PF01527)
190485.XCC1636PF01609
190485.XCC3701+not used
190485.XCC2656PF17067
190485.XCC3381(+)(PF01670)
190485.XCC0012(+)(mitochondrial)
190485.XCC4140(PF01527)
190485.XCC4141PF13276
190485.XCC0128PF01609
190485.XCC0467(<)
190485.XCC3718+
190485.XCC3713+
190485.XCC3327+
190485.XCC0393PF01609
190485.XCC0399(PF01527)
190485.XCC3843+
190485.XCC0646+
190485.XCC2391+
190485.XCC1606(PF01527)
190485.XCC1607PF13683
190485.XCC3464(PF01527)
190485.XCC1854+
190485.XCC3113(PF01527)
190485.XCC2898(PF01527)
190485.XCC0004+
190485.XCC0136PF01609
190485.XCC1352+
190485.XCC3852+
190485.XCC2707(PF01527)
190485.XCC2708PF13276
190485.XCC3001+
190485.XCC2095(+)(PF13086)
190485.XCC2098PF13683
190485.XCC1289+
190485.XCC3270+
190485.XCC2073(+)mitochondrial; not used
190485.XCC3473PF01609
190485.XCC1508+
190485.XCC0922+
190485.XCC3295+
190485.XCC3296(PF01764)
190485.XCC0039+
190485.XCC0030+
190485.XCC4128+
190485.XCC4129+
190485.XCC0107(+)(mitochondrial)
190485.XCC2245(+)(PF04768)
190485.XCC2244(+)(mitochondrial)
190485.XCC2248+
190485.XCC0145+
190485.XCC0147(+)(ER)
190485.XCC1949+
190485.XCC0750(PF11539)
190485.XCC2667+
190485.XCC3593+
190485.XCC2060(+)mitochondrial; not used
190485.XCC1577+
190485.XCC3623(PF01764)
190485.XCC3138(PF01527)
190485.XCC3133(PF13086)
190485.XCC3134(PF01527)
190485.XCC3135PF13683
190485.XCC3136(PF01527)
190485.XCC2875+
190485.XCC1995+
190485.XCC1997(PF06884)
190485.XCC2981+
190485.XCC0238+
190485.XCC0239(+)(>)
190485.XCC0230+
190485.XCC0231+
190485.XCC3907PF01609
190485.XCC2559(+)(mitochondrial)
190485.XCC0586+
190485.XCC0345+
190485.XCC0342+
190485.XCC2473PF13683not used
190485.XCC2474+
190485.XCC0568+
190485.XCC0569(>)
190485.XCC0561(PF01527)
190485.XCC3581(PF01527)
190485.XCC3583(PF01527)
190485.XCC1561(>)
190485.XCC3451(+)plastid
190485.XCC3515+
190485.XCC0834+
190485.XCC1412(+)plastid
190485.XCC3124PF13683
190485.XCC3123(PF01527)
190485.XCC2314+
190485.XCC3272+
190485.XCC4049(+)(mitochondrial)
190485.XCC2868+
190485.XCC1985+
190485.XCC4043+
190485.XCC2990+
190485.XCC2446+
190485.XCC1364(+)(plastid)
190485.XCC1362+
190485.XCC1361+
190485.XCC1360+
190485.XCC3078(+)(plastid)
190485.XCC0352(+)plastid
190485.XCC3479+
190485.XCC0167+
190485.XCC2713+
190485.XCC2269+
190485.XCC0574+
190485.XCC1089+
190485.XCC2685+
190485.XCC3022+
190485.XCC2049PF01609
190485.XCC1798PF01609
190485.XCC1796(PF01527)
190485.XCC3481(PF01527)
190485.XCC3203(>)
190485.XCC2443+
190485.XCC4074(+)plastid
190485.XCC2853(+)(plastid)
190485.XCC2857+
190485.XCC4110(PF10013)not used
190485.XCC0170+
190485.XCC1317+not used
190485.XCC0363(+)(ER)
190485.XCC1766+
190485.XCC1163(+)(PF07720)
190485.XCC3551+
190485.XCC1097+
190485.XCC2523+
190485.XCC2525(>)
190485.XCC2039+
190485.XCC3496PF13276
190485.XCC3495(PF01527)
190485.XCC3329+
190485.XCC3141+
190485.XCC3140PF13683
190485.XCC3145+
190485.XCC4069(>)
190485.XCC1109+
190485.XCC1631+
190485.XCC0354+
190485.XCC1947+
190485.XCC1899PF01609
190485.XCC1898+
190485.XCC1892+
190485.XCC3706+
190485.XCC0374(PF01163)
190485.XCC1232(+)plastid
190485.XCC2609+
190485.XCC1072+
190485.XCC2548(>)
190485.XCC3319+
190485.XCC1448PF01609
190485.XCC3774(+)
190485.XCC3740(+)
190485.XCC1930(+)
190485.XCC1938(+)
190485.XCC1939(+)
190485.XCC0156(+)
190485.XCC1848(+)
190485.XCC1846(+)
190485.XCC1337(+)
190485.XCC1332(+)
190485.XCC1205(+)
190485.XCC0672(+)
190485.XCC2788(+)
190485.XCC0571(+)
190485.XCC0634(+)
190485.XCC1343(+)
190485.XCC2165(+)
190485.XCC0891(+)
190485.XCC3762(+)
190485.XCC0942(+)
190485.XCC4087(+)
190485.XCC4080(+)
190485.XCC2821(+)
190485.XCC3502(+)
190485.XCC0404(+)
190485.XCC2319(+)
190485.XCC2179(+)
190485.XCC1465(+)
190485.XCC3809(+)
190485.XCC1664(+)
190485.XCC0508(+)
190485.XCC1865(+)
190485.XCC1268(+)
190485.XCC0435(+)
190485.XCC3986(+)
190485.XCC3982(+)
190485.XCC1699(+)
190485.XCC1056(+)
190485.XCC1050(+)
190485.XCC1059(+)
190485.XCC2565(+)
190485.XCC2763(+)
190485.XCC2760(+)
190485.XCC1582(+)
190485.XCC1472(+)
190485.XCC3569(+)
190485.XCC3183(+)
190485.XCC2617(+)
190485.XCC3695(+)
190485.XCC3697(+)
190485.XCC1901(+)
190485.XCC0182(+)
190485.XCC2978(+)
190485.XCC2972(+)
190485.XCC0335(+)
190485.XCC1270(+)
190485.XCC4180(+)
190485.XCC1110(+)
190485.XCC1088(+)
190485.XCC1060(+)
190485.XCC1067(+)
190485.XCC2578(+)
190485.XCC2371(+)
190485.XCC0939(+)
190485.XCC2118(+)
190485.XCC1649(+)
190485.XCC1640(+)
190485.XCC3225(+)
190485.XCC3645(+)
190485.XCC0195(+)
190485.XCC2902(+)
190485.XCC2904(+)
190485.XCC1800(+)
190485.XCC1805(+)
190485.XCC2540(+)
190485.XCC2349(+)
190485.XCC2120(+)
190485.XCC3505(+)
190485.XCC0850(+)
190485.XCC2630(+)
190485.XCC3811(+)
190485.XCC0188(+)
190485.XCC1818(+)
190485.XCC3886(+)
190485.XCC1253(+)
190485.XCC1252(+)
190485.XCC4055(+)
190485.XCC0282(+)
190485.XCC3923(+)
190485.XCC1002(+)
190485.XCC3869(+)
190485.XCC3862(+)
190485.XCC2750(+)
190485.XCC3784(+)
190485.XCC1510(+)
190485.XCC0714(+)
190485.XCC0712(+)
190485.XCC3240(+)
190485.XCC1534(+)
190485.XCC3396(+)
190485.XCC2454(+)
190485.XCC1399(+)
190485.XCC0064(+)not used
190485.XCC3899(+)
190485.XCC0276(+)
190485.XCC2724(+)
190485.XCC4189(+)
190485.XCC3902(+)
190485.XCC0496(+)
190485.XCC0725(+)
190485.XCC3093(+)
190485.XCC3095(+)
190485.XCC2030(+)
190485.XCC2936(+)
190485.XCC2201(+)
190485.XCC3533(+)
190485.XCC3339(+)
190485.XCC0268(+)
190485.XCC3497(+)
190485.XCC3324(+)
190485.XCC2731(+)
190485.XCC1735(+)
190485.XCC0488(+)
190485.XCC2426(+)
190485.XCC2398(+)
190485.XCC1600(+)
190485.XCC0732(+)
190485.XCC0731(+)
190485.XCC2644(+)
190485.XCC1519(+)
190485.XCC0873(+)
190485.XCC3976(+)
190485.XCC0863(+)
190485.XCC3112(+)not used
190485.XCC1320(+)
190485.XCC3536(+)
190485.XCC2893(+)
190485.XCC4159(+)
190485.XCC1358(+)
190485.XCC1030(+)
190485.XCC4213(+)
190485.XCC2410(+)
190485.XCC1612(+)
190485.XCC0747(+)
190485.XCC2674(+)
190485.XCC3105(+)
190485.XCC3100(+)
190485.XCC2503(+)
190485.XCC4026(+)
190485.XCC4124(+)
190485.XCC0108(+)
190485.XCC3494(+)
190485.XCC3088(+)
190485.XCC1323(+)
190485.XCC3829(+)
190485.XCC1750(+)
190485.XCC2409(+)
190485.XCC2402(+)
190485.XCC2086(+)
190485.XCC2704(+)
190485.XCC1326(+)
190485.XCC2705(+)
190485.XCC2702(+)
190485.XCC3625(+)
190485.XCC1063(+)
190485.XCC3132(+)
190485.XCC1998(+)
190485.XCC0530(+)
190485.XCC0237(+)
190485.XCC1370(+)
190485.XCC1375(+)
190485.XCC0343(+)
190485.XCC2022(+)
190485.XCC2273(+)
190485.XCC0691(+)
190485.XCC2478(+)
190485.XCC2479(+)
190485.XCC2472(+)
190485.XCC2471(+)
190485.XCC0761(+)
190485.XCC3514(+)
190485.XCC0831(+)
190485.XCC1417(+)
190485.XCC1416(+)
190485.XCC1413(+)
190485.XCC2676(+)
190485.XCC1969(+)
190485.XCC4046(+)
190485.XCC2999(+)
190485.XCC1834(+)
190485.XCC3802(+)
190485.XCC1173(+)
190485.XCC1502(+)
190485.XCC0772(+)
190485.XCC0775(+)
190485.XCC1082(+)
190485.XCC2267(+)
190485.XCC3024(+)
190485.XCC2717+
190485.XCC2716(+)
190485.XCC3488(+)
190485.XCC3487(+)
190485.XCC1950(+)
190485.XCC1955(+)
190485.XCC0950(+)
190485.XCC4205(+)
190485.XCC3924(+)
190485.XCC1315(+)
190485.XCC3341(+)
190485.XCC1762(+)
190485.XCC3934(+)
190485.XCC2328(+)
190485.XCC0548(+)
190485.XCC2218(+)
190485.XCC2522(+)
190485.XCC1543(+)
190485.XCC1540(+)
190485.XCC1781(+)
190485.XCC1782(+)
190485.XCC1438(+)
190485.XCC3528(+)
190485.XCC1234(+)
190485.XCC2362(+)
190485.XCC2337(+)
190485.XCC2449(+)
190485.XCC2023(+)
190485.XCC1091(+)
190485.XCC0683(+)
190485.XCC1214(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 1.1 (11/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0.9 (9/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 0.5 (4/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================