Effective results for Hahella chejuensis KCTC 2396 (eggnog40)

Summary

Number of putative secreted proteins: 943
- Predicted by EffectiveT3: 230 (high confidence), 412 (low confidence)
- Predicted by EffectiveCCBD: 32 within, 16 before, 56 behind expected region 25..70aa
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 54 eukaryotic-like domains, contained in 230 proteins (17 high, 213 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
349521.HCH_01552(PF13768) (PF08487)ER
349521.HCH_00089(PF13768) (PF08487)mitochondrial; (mitochondrial)
349521.HCH_00410+(PF00497)ER
349521.HCH_03312(PF00497)ER
349521.HCH_03318PF05932(ER)
349521.HCH_10010(PF14602)mitochondrial
349521.HCH_06067(PF00497)ER
349521.HCH_02801+(PF00497)(ER)
349521.HCH_03474(PF00497)mitochondrial
349521.HCH_00709(PF00497)ER
349521.HCH_00708(PF00497)ER
349521.HCH_04913(PF13174)ER; (ER)
349521.HCH_00277(PF00497)ER
349521.HCH_06608(PF00497)ER
349521.HCH_04768+mitochondrial; (mitochondrial)
349521.HCH_04417(<)ER
349521.HCH_04161(PF00497)ER
349521.HCH_03752(PF00497)ER
349521.HCH_03113PF09716ER
349521.HCH_03116(PF00497)ER
349521.HCH_03589(PF00497)ER
349521.HCH_04330(PF00497)(mitochondrial)
349521.HCH_02222(PF16036)ER
349521.HCH_00173(>)(ER)
349521.HCH_02204(PF16187)ER
349521.HCH_02925(PF00497)ER
349521.HCH_02920(PF13582)mitochondrial
349521.HCH_02466+(mitochondrial)
349521.HCH_04441(PF13688)mitochondrial; (mitochondrial)
349521.HCH_06529(>)ER
349521.HCH_03056(PF00497)ER
349521.HCH_01375(PF00497)ER
349521.HCH_06813(PF00497)ER
349521.HCH_02489(>)ER
349521.HCH_03679(PF13023)mitochondrial
349521.HCH_01124(PF00497)ER
349521.HCH_00658+mitochondrial
349521.HCH_05929(<)ER
349521.HCH_06498(PF08487)ER
349521.HCH_07016(PF09414)mitochondrial
349521.HCH_03380(>)ER
349521.HCH_01720(PF00497)ER
349521.HCH_01721(PF00497)ER
349521.HCH_01729(PF09976)ER
349521.HCH_00670(PF00497)ER
349521.HCH_06518(>)ER
349521.HCH_05178+ER
349521.HCH_04611+ER
349521.HCH_04610(>)ER
349521.HCH_02752(>)(mitochondrial)
349521.HCH_06729PF08235ER
349521.HCH_05759+(ER)
349521.HCH_01275(PF00497)ER
349521.HCH_04241(PF03924)(ER); ER
349521.HCH_02365(PF00497)ER
349521.HCH_06894+ER; (ER)
349521.HCH_00449+ER
349521.HCH_06932+(mitochondrial); (plastid)
349521.HCH_04013(>)ER
349521.HCH_05825(PF00497)ER
349521.HCH_03305(PF13174)ER
349521.HCH_05075(>)(PF03015)(mitochondrial)
349521.HCH_01827(PF13927)ER
349521.HCH_01826+(mitochondrial)
349521.HCH_06941+ER
349521.HCH_03533(PF05593)(ER)
349521.HCH_05807(PF00497)ER
349521.HCH_06341(<)ER
349521.HCH_05584+ER; (ER)
349521.HCH_03514(>)(ER)
349521.HCH_03519(PF00497)ER
349521.HCH_04057(PF00497)ER
349521.HCH_00457(>)ER
349521.HCH_04883(PF00497)ER
349521.HCH_02073(PF05593)ER
349521.HCH_03857(PF00497)ER
349521.HCH_00887(PF00497)ER
349521.HCH_02627(PF13174)ER
349521.HCH_02620(PF13768)ER
349521.HCH_00710+ER
349521.HCH_02015(PF00497)ER
349521.HCH_02014(PF00497)ER
349521.HCH_01383(PF05593)ER
349521.HCH_01658(PF00497)ER
349521.HCH_01650PF13895ER
349521.HCH_06444(PF00497)ER
349521.HCH_02602(PF13174)ER
349521.HCH_02601(PF13174)ER
349521.HCH_04174(PF00497)ER
349521.HCH_03744(PF10462)ER
349521.HCH_01671(PF13927)(ER)
349521.HCH_06097(PF00497)ER
349521.HCH_03575(PF00497)ER
349521.HCH_06468(+)(>)(mitochondrial)
349521.HCH_06059(PF13640)(mitochondrial)
349521.HCH_02190(+)(PF00497)mitochondrial
349521.HCH_03222(PF00045)ER
349521.HCH_02179(PF03924)ER
349521.HCH_02172(PF04784)ER
349521.HCH_04329(PF00497)ER
349521.HCH_06670(PF00497)ER
349521.HCH_00144(+)+(mitochondrial)
349521.HCH_00143(PF00497)ER
349521.HCH_01979(PF00497)ER
349521.HCH_00945(PF04012)(mitochondrial)
349521.HCH_00309(PF00497)(mitochondrial)
349521.HCH_02458(>)ER
349521.HCH_02453(>)ER; (ER)
349521.HCH_04001(PF00497)ER
349521.HCH_02210(PF00497)ER
349521.HCH_06937(PF00497)ER
349521.HCH_05487(PF00497)ER
349521.HCH_05486+ER
349521.HCH_01172(PF00497)ER
349521.HCH_06807(PF00497)mitochondrial
349521.HCH_05464(PF00497)ER
349521.HCH_06569+(ER); ER
349521.HCH_02491(>)(ER)
349521.HCH_04439(PF13688)ER; (mitochondrial)
349521.HCH_04173(PF00497)ER
349521.HCH_05442(PF00497)ER
349521.HCH_01759(PF13582)ER
349521.HCH_03669PF00967ER
349521.HCH_01135(PF00182)ER
349521.HCH_01260(PF00497)ER
349521.HCH_03473(PF00497)ER
349521.HCH_02704+mitochondrial
349521.HCH_07004(PF09414)(mitochondrial)
349521.HCH_06177(PF13174)ER
349521.HCH_05423(PF00497)ER
349521.HCH_04383+ER
349521.HCH_01043(PF04784)ER
349521.HCH_02296(>)ER
349521.HCH_05742(PF00497)ER
349521.HCH_02571(PF00497)ER
349521.HCH_01878(PF16036)ER
349521.HCH_02747(PF09976)ER
349521.HCH_03563(PF01117)(ER)
349521.HCH_05214(PF00497)ER
349521.HCH_03903+ER
349521.HCH_04166+(ER)
349521.HCH_04811(PF00497)ER
349521.HCH_04810(PF00497)ER
349521.HCH_00355(PF00497)ER
349521.HCH_01196(PF00497)ER
349521.HCH_00813(PF00497)(ER)
349521.HCH_04060(PF00497)ER
349521.HCH_05830(>)ER
349521.HCH_04787(PF00497)ER
349521.HCH_01208(PF00497)ER
349521.HCH_05001(PF16187)ER
349521.HCH_04668(PF03924)(mitochondrial)
349521.HCH_05643(PF05593)ER
349521.HCH_03521(PF00497)(ER)
349521.HCH_00761(PF00497)ER
349521.HCH_06684(+)mitochondrial
349521.HCH_05065(+)(mitochondrial)
349521.HCH_04046(+)(ER)
349521.HCH_00212(PF02543) (PF16861)
349521.HCH_01609(PF12038)(mitochondrial)
349521.HCH_02808(PF02543) (PF16861)
349521.HCH_04071+(plastid)
349521.HCH_06943(<)mitochondrial; not used
349521.HCH_05362+plastid
349521.HCH_04919(>)(ER)
349521.HCH_04910+(plastid)
349521.HCH_04105(+)mitochondrial; (mitochondrial)
349521.HCH_05341(+)mitochondrial; (mitochondrial)
349521.HCH_00910(PF00497)(mitochondrial)
349521.HCH_01467(PF00497)(ER)
349521.HCH_00330(+)ER; (ER)
349521.HCH_00331(PF16036)(mitochondrial)
349521.HCH_04481+(plastid)
349521.HCH_04136+(plastid)
349521.HCH_01312+(mitochondrial); not used
349521.HCH_00490(>)(PF13640)
349521.HCH_03610(+)(ER)
349521.HCH_03618(+)mitochondrial; (mitochondrial)
349521.HCH_01590(+)mitochondrial
349521.HCH_00732(<)(plastid)
349521.HCH_05732PF02750(plastid)
349521.HCH_05734(+)(mitochondrial)
349521.HCH_03678(+)ER
349521.HCH_05381+(>)
349521.HCH_05384(PF01715)(ER)
349521.HCH_06705+plastid
349521.HCH_04820+plastid
349521.HCH_04822+plastid
349521.HCH_00616(+)(ER)
349521.HCH_05190(PF02874)(mitochondrial)
349521.HCH_03348(+)(mitochondrial)
349521.HCH_04249++
349521.HCH_01860(+)(mitochondrial)
349521.HCH_02779(PF05593)(ER)
349521.HCH_06138+(>)
349521.HCH_05010+(>)
349521.HCH_04018(+)ER; (ER)
349521.HCH_02327+(plastid)
349521.HCH_01559(+)ER
349521.HCH_00203(+)ER
349521.HCH_00246(+)ER
349521.HCH_06978+(mitochondrial)
349521.HCH_05587+(mitochondrial)
349521.HCH_02387(PF02543) (PF16861)
349521.HCH_02604(+)ER
349521.HCH_03357(+)(ER)
349521.HCH_04360(+)ER
349521.HCH_01514+(plastid)
349521.HCH_01476(PF00497)(mitochondrial)
349521.HCH_03784+(PF05593)
349521.HCH_01423(+)mitochondrial; (mitochondrial)
349521.HCH_03145+(ER); not used
349521.HCH_04511(+)ER
349521.HCH_01797(>)(mitochondrial)
349521.HCH_02915+(ER)
349521.HCH_00963(>)(mitochondrial)
349521.HCH_03603(+)(PF02543) (PF16861)
349521.HCH_01189+(plastid)
349521.HCH_00643(<)(ER); not used
349521.HCH_06826+(mitochondrial)
349521.HCH_06827+mitochondrial
349521.HCH_02701+(ER)
349521.HCH_06956+ER
349521.HCH_01936(PF00497)(ER)
349521.HCH_05890(+)(mitochondrial)
349521.HCH_02513+(mitochondrial); not used
349521.HCH_05951+(plastid)
349521.HCH_06297+(PF06041)
349521.HCH_00837+(plastid)
349521.HCH_03560(+)ER
349521.HCH_06882+(mitochondrial)
349521.HCH_02316+(PF13640)
349521.HCH_01526+plastid
349521.HCH_00032(+)(ER)
349521.HCH_01209PF16683(ER)
349521.HCH_07084(PF00497)
349521.HCH_05817(PF13672)
349521.HCH_05815+
349521.HCH_05810+
349521.HCH_06353+
349521.HCH_03319(+)(plastid)
349521.HCH_10012(PF14803)
349521.HCH_04856+
349521.HCH_06062+
349521.HCH_06065(+)plastid
349521.HCH_01488(+)(plastid)
349521.HCH_01487(+)(mitochondrial)
349521.HCH_03881(PF14602)
349521.HCH_00681(+)(PF00182)
349521.HCH_04212(PF14240)
349521.HCH_03085+
349521.HCH_02862+
349521.HCH_05279(+)(>)
349521.HCH_01560(PF00182)
349521.HCH_00741+
349521.HCH_06237+
349521.HCH_06378(<)
349521.HCH_01923+
349521.HCH_03339(>)
349521.HCH_06962(+)(plastid)
349521.HCH_05596+
349521.HCH_04234+
349521.HCH_05045+
349521.HCH_05047+
349521.HCH_06585(PF04012)
349521.HCH_02809+
349521.HCH_03293+
349521.HCH_06258+
349521.HCH_02651(PF11815)
349521.HCH_05854+
349521.HCH_06902(>)
349521.HCH_06905(+)(plastid)
349521.HCH_04729(>)
349521.HCH_04899+
349521.HCH_00397(+)(ER)
349521.HCH_00395(+)(PF05929)
349521.HCH_00892(+)(PF13672)
349521.HCH_05626+
349521.HCH_05628+
349521.HCH_00758+
349521.HCH_03278+
349521.HCH_03274+
349521.HCH_06026+
349521.HCH_04473+
349521.HCH_04370(+)(<)
349521.HCH_04371+
349521.HCH_04379(PF00497)
349521.HCH_04706(+)plastid
349521.HCH_02022(PF06042)
349521.HCH_01422+
349521.HCH_03738(>)
349521.HCH_03735(+)plastid
349521.HCH_03737+
349521.HCH_05559(>)
349521.HCH_03251(PF05593)
349521.HCH_01094+
349521.HCH_04355+
349521.HCH_04766(PF06041)
349521.HCH_04764(>)
349521.HCH_04416+
349521.HCH_00917(+)(PF02874)
349521.HCH_05981+
349521.HCH_05573+
349521.HCH_05579+
349521.HCH_01404(PF01661)
349521.HCH_04296(+)(PF13672)
349521.HCH_00337(>)
349521.HCH_03110+
349521.HCH_03236+
349521.HCH_03232PF05932
349521.HCH_06533(+)(mitochondrial)
349521.HCH_02183+
349521.HCH_05323+
349521.HCH_04331+
349521.HCH_05516+
349521.HCH_02795+
349521.HCH_02798+
349521.HCH_00485+
349521.HCH_05588(+)(PF13640)
349521.HCH_03829+
349521.HCH_03821+
349521.HCH_04075(PF02874)
349521.HCH_04480+
349521.HCH_03177(+)(mitochondrial)
349521.HCH_02227(PF01715)
349521.HCH_01143(<)
349521.HCH_00951(PF16804)
349521.HCH_05536+
349521.HCH_02449(PF02403)
349521.HCH_03157(<)
349521.HCH_01785+
349521.HCH_01167+
349521.HCH_01169+
349521.HCH_04132+
349521.HCH_04699+
349521.HCH_03403(PF07250)
349521.HCH_00370+
349521.HCH_00198(PF06041)
349521.HCH_00199+
349521.HCH_04504+
349521.HCH_01968(PF01661)
349521.HCH_01969(PF05593)
349521.HCH_06527(+)(<)
349521.HCH_02127(>)
349521.HCH_03058+
349521.HCH_06579(PF06042)
349521.HCH_02482+
349521.HCH_05132PF05932
349521.HCH_05135+
349521.HCH_05134PF05932
349521.HCH_05136(>)
349521.HCH_04529+
349521.HCH_03195+
349521.HCH_06288+
349521.HCH_02104+
349521.HCH_00537+
349521.HCH_05730(>)
349521.HCH_01746+
349521.HCH_03073+
349521.HCH_05927(>)
349521.HCH_06163(PF01947)
349521.HCH_00864+
349521.HCH_06863(PF13672)
349521.HCH_06763(+)(ER)
349521.HCH_06765(+)(PF05929)
349521.HCH_01014+
349521.HCH_04120+
349521.HCH_04122+
349521.HCH_00099+not used
349521.HCH_02521+
349521.HCH_06537+
349521.HCH_00843(PF13565)
349521.HCH_03032+not used
349521.HCH_01152PF05932
349521.HCH_00462+
349521.HCH_00281+
349521.HCH_00283+
349521.HCH_05310+
349521.HCH_01257+
349521.HCH_02506+
349521.HCH_03031(PF13672)
349521.HCH_01884+
349521.HCH_01883+
349521.HCH_00825+
349521.HCH_03706(+)+
349521.HCH_03158+
349521.HCH_06724(PF13640)
349521.HCH_04807+
349521.HCH_04801+
349521.HCH_03347(PF00497)
349521.HCH_00583+
349521.HCH_01181(PF13565)
349521.HCH_05030+
349521.HCH_04631+
349521.HCH_04630(+)PF05932
349521.HCH_00809(+)(PF03924)
349521.HCH_00597+
349521.HCH_00593+
349521.HCH_07072(+)(plastid)
349521.HCH_07073(PF02874)
349521.HCH_07071(PF02874)
349521.HCH_07078+
349521.HCH_06473(>)
349521.HCH_04868(+)(plastid)
349521.HCH_01215+
349521.HCH_02549(>)
349521.HCH_02304(<)
349521.HCH_01025(>)
349521.HCH_03304+not used
349521.HCH_05793+not used
349521.HCH_05798+
349521.HCH_03186+
349521.HCH_01238(<)
349521.HCH_03893+
349521.HCH_05073(>)
349521.HCH_04205+not used
349521.HCH_04202+
349521.HCH_04670+
349521.HCH_02325+
349521.HCH_05241(PF14602)
349521.HCH_00245+
349521.HCH_03344+
349521.HCH_00981+
349521.HCH_00987(PF04012)
349521.HCH_02052+
349521.HCH_06974(PF00497)
349521.HCH_05582+
349521.HCH_00699+
349521.HCH_06597(PF04012)
349521.HCH_06594+
349521.HCH_05614(PF13565)
349521.HCH_05616+
349521.HCH_03511(>)
349521.HCH_02649+
349521.HCH_00739+
349521.HCH_00228+
349521.HCH_00229(PF00025)
349521.HCH_00737(>)
349521.HCH_00220+not used
349521.HCH_06369(>)
349521.HCH_05864+
349521.HCH_04738+
349521.HCH_02075(PF05593)
349521.HCH_00505(+)mitochondrial
349521.HCH_01636+
349521.HCH_01637(<)
349521.HCH_00883+
349521.HCH_00884+
349521.HCH_03286PF05932
349521.HCH_03281(+)(PF07720)
349521.HCH_06010+
349521.HCH_06383(PF13565)
349521.HCH_04719(>)
349521.HCH_02012+
349521.HCH_01381+not used
349521.HCH_04155+
349521.HCH_00527(>)
349521.HCH_00526(+)(mitochondrial)
349521.HCH_05099+
349521.HCH_05096+
349521.HCH_02830+
349521.HCH_02838+not used
349521.HCH_06440(>)
349521.HCH_06441+not used
349521.HCH_04961+
349521.HCH_03268(PF02874)
349521.HCH_06036+
349521.HCH_00267+
349521.HCH_06248+
349521.HCH_04775+
349521.HCH_04770+
349521.HCH_01960(+)(mitochondrial); not used
349521.HCH_06193+
349521.HCH_01413+
349521.HCH_03818(>)
349521.HCH_06093+
349521.HCH_03107+
349521.HCH_04908+
349521.HCH_06053(PF13640)
349521.HCH_02195(PF14803)
349521.HCH_05351+
349521.HCH_04343(PF09414)
349521.HCH_02380+
349521.HCH_02974+not used
349521.HCH_02978+
349521.HCH_05505+
349521.HCH_01692(PF05593)
349521.HCH_02411+
349521.HCH_05692+
349521.HCH_05699+
349521.HCH_06074PF05932
349521.HCH_06073+
349521.HCH_05339+
349521.HCH_02786(PF13672)
349521.HCH_02434+
349521.HCH_03147+
349521.HCH_02231+
349521.HCH_01970+
349521.HCH_02157+
349521.HCH_05087(>)
349521.HCH_01151+
349521.HCH_04308+
349521.HCH_00941(PF13927)
349521.HCH_04688(+)(<)
349521.HCH_01308+
349521.HCH_03051+
349521.HCH_02093(PF05593)
349521.HCH_05107(PF02874)
349521.HCH_01958(PF13023)
349521.HCH_01953(PF13672)
349521.HCH_04475(>)
349521.HCH_04002(PF13672)
349521.HCH_02683+
349521.HCH_00962+
349521.HCH_01362+
349521.HCH_06800+
349521.HCH_00365+
349521.HCH_00369+not used
349521.HCH_01580+
349521.HCH_01583+
349521.HCH_03988(+)+
349521.HCH_01975PF02893
349521.HCH_04454(PF09976)
349521.HCH_03181(PF13672)
349521.HCH_02278+
349521.HCH_02272+
349521.HCH_02118+
349521.HCH_02113+
349521.HCH_05725+
349521.HCH_03606(PF00497)
349521.HCH_00426(+)(mitochondrial)
349521.HCH_01117(>)
349521.HCH_00649(>)
349521.HCH_06566(+)(>)
349521.HCH_03458+
349521.HCH_01340+
349521.HCH_00344(PF03924)
349521.HCH_02254(PF01661)
349521.HCH_05707+
349521.HCH_05703+
349521.HCH_05443(PF04012)
349521.HCH_03668+
349521.HCH_01266+
349521.HCH_05931(>)
349521.HCH_05938(>)
349521.HCH_03477(PF10162)
349521.HCH_00872PF05932
349521.HCH_03048+
349521.HCH_05169+
349521.HCH_06929+
349521.HCH_03392PF12142
349521.HCH_05761(PF14240)
349521.HCH_05420+
349521.HCH_05395+
349521.HCH_05391+
349521.HCH_02512+
349521.HCH_00603(PF13565)
349521.HCH_03004+
349521.HCH_03000+not used
349521.HCH_02721(PF02403)
349521.HCH_02727(>)
349521.HCH_00473(PF05593)
349521.HCH_03109(<)not used
349521.HCH_07024(+)(plastid)
349521.HCH_05744+not used
349521.HCH_04830+
349521.HCH_04834(PF14602)
349521.HCH_04838+
349521.HCH_00346+
349521.HCH_00042(PF14602)
349521.HCH_00621+
349521.HCH_03026(PF14803)
349521.HCH_02846+
349521.HCH_03565(PF00165)not used
349521.HCH_03569(+)(mitochondrial)
349521.HCH_01056(>)
349521.HCH_05210+
349521.HCH_01401+
349521.HCH_01915+
349521.HCH_00257(+)(ER)
349521.HCH_04438+
349521.HCH_04297+
349521.HCH_02088(PF05593)
349521.HCH_01268(+)(mitochondrial)
349521.HCH_02086(PF05593)
349521.HCH_02080(+)(PF05593)
349521.HCH_01199(PF05593)
349521.HCH_01858+
349521.HCH_01332(PF13565)
349521.HCH_00816(PF13023)
349521.HCH_03801+
349521.HCH_01522(+)(mitochondrial); not used
349521.HCH_07069(PF14602)
349521.HCH_04062(PF05593)
349521.HCH_04872(PF01661)
349521.HCH_01205+
349521.HCH_04664+
349521.HCH_05646+not used
349521.HCH_05648+
349521.HCH_05259(PF14602)
349521.HCH_01019+
349521.HCH_00762+
349521.HCH_06358(+)
349521.HCH_06357(+)
349521.HCH_04859(+)not used
349521.HCH_02047(+)
349521.HCH_00574(+)
349521.HCH_01482(+)
349521.HCH_03887(+)
349521.HCH_00685(+)
349521.HCH_05067(+)not used
349521.HCH_04218(+)not used
349521.HCH_02856(+)
349521.HCH_02854(+)
349521.HCH_05278(+)
349521.HCH_02671(+)
349521.HCH_00218(+)
349521.HCH_06965(+)
349521.HCH_00511(+)
349521.HCH_04233(+)
349521.HCH_05040(+)
349521.HCH_05042(+)
349521.HCH_06587(+)not used
349521.HCH_02803(+)
349521.HCH_04952(+)
349521.HCH_06544(+)
349521.HCH_03291(+)
349521.HCH_06008(+)
349521.HCH_02657(+)
349521.HCH_00728(+)
349521.HCH_00721(+)
349521.HCH_00233(+)
349521.HCH_06391(+)
349521.HCH_05853(+)
349521.HCH_06907(+)
349521.HCH_02009(+)
349521.HCH_01628(+)
349521.HCH_05624(+)
349521.HCH_05623(+)not used
349521.HCH_03277(+)
349521.HCH_04472(+)
349521.HCH_00700(+)
349521.HCH_05368(+)
349521.HCH_06622(+)
349521.HCH_06075(+)
349521.HCH_03731(+)
349521.HCH_03868(+)not used
349521.HCH_01918(+)
349521.HCH_01093(+)
349521.HCH_04103(+)
349521.HCH_05345(+)
349521.HCH_04765(+)
349521.HCH_04419(+)
349521.HCH_05989+
349521.HCH_03805(+)
349521.HCH_01988(+)
349521.HCH_05320(+)
349521.HCH_05322(+)
349521.HCH_04336(+)not used
349521.HCH_04295(+)
349521.HCH_04048(+)not used
349521.HCH_04745(+)
349521.HCH_04740(+)
349521.HCH_04047(+)
349521.HCH_00934(+)
349521.HCH_00935(+)
349521.HCH_01683(+)
349521.HCH_00158(+)
349521.HCH_00153(+)
349521.HCH_02885(+)
349521.HCH_03178(+)
349521.HCH_03210(+)
349521.HCH_05680(+)
349521.HCH_05688(+)
349521.HCH_02221(+)
349521.HCH_02223(+)
349521.HCH_02169(+)
349521.HCH_01149(+)
349521.HCH_04318(+)
349521.HCH_05302(+)
349521.HCH_02947(+)
349521.HCH_03799(+)not used
349521.HCH_03798(+)
349521.HCH_03795(+)
349521.HCH_03155(+)
349521.HCH_01947(+)
349521.HCH_02201(+)
349521.HCH_02143(+)
349521.HCH_01786(+)
349521.HCH_01162(+)
349521.HCH_06214(+)
349521.HCH_00977(+)
349521.HCH_00376(+)
349521.HCH_00321(+)
349521.HCH_02269(+)
349521.HCH_02264(+)
349521.HCH_01109(+)not used
349521.HCH_05908(+)
349521.HCH_03425(+)
349521.HCH_01376(+)
349521.HCH_01379(+)not used
349521.HCH_05282(+)
349521.HCH_01599(+)
349521.HCH_06749(+)
349521.HCH_05138(+)
349521.HCH_01606(+)
349521.HCH_01740(+)
349521.HCH_03670(+)
349521.HCH_00654(+)
349521.HCH_00863(+)
349521.HCH_00400(+)
349521.HCH_05156(+)
349521.HCH_04541(+)
349521.HCH_03363(+)
349521.HCH_00097(+)
349521.HCH_02525(+)
349521.HCH_00676(+)
349521.HCH_10029(+)not used
349521.HCH_06514(+)
349521.HCH_02738(+)
349521.HCH_06859(+)
349521.HCH_06855(+)
349521.HCH_04560(+)
349521.HCH_04562(+)
349521.HCH_03295(+)not used
349521.HCH_00280(+)
349521.HCH_02286(+)
349521.HCH_05884(+)
349521.HCH_06287(+)
349521.HCH_05772(+)
349521.HCH_00619(+)not used
349521.HCH_00614(+)
349521.HCH_06517(+)
349521.HCH_03034(+)not used
349521.HCH_04618(+)
349521.HCH_02347(+)
349521.HCH_02755(+)
349521.HCH_01065(+)
349521.HCH_06430(+)
349521.HCH_06878(+)
349521.HCH_00445(+)not used
349521.HCH_05756(+)
349521.HCH_06263(+)
349521.HCH_01278(+)
349521.HCH_02564(+)
349521.HCH_02988(+)
349521.HCH_01864(+)
349521.HCH_02772(+)
349521.HCH_00594(+)
349521.HCH_00595(+)
349521.HCH_04030(+)
349521.HCH_04796(+)
349521.HCH_04799(+)
349521.HCH_02095(+)
349521.HCH_05018(+)
349521.HCH_02308(+)
349521.HCH_06507(+)
349521.HCH_06551(+)
349521.HCH_05222(+)
349521.HCH_05227(+)
349521.HCH_05823(+)
349521.HCH_06320(+)
349521.HCH_04843(+)
349521.HCH_00167(+)
349521.HCH_01231(+)
349521.HCH_05074(+)
349521.HCH_05076(+)
349521.HCH_04201(+)
349521.HCH_01825(+)
349521.HCH_01824(+)
349521.HCH_04671(+)not used
349521.HCH_02329(+)
349521.HCH_05675(+)
349521.HCH_03538(+)
349521.HCH_01005(+)
349521.HCH_00754(+)
349521.HCH_00753(+)
349521.HCH_03956(+)
349521.HCH_06697(+)
349521.HCH_03323(+)
349521.HCH_06970(+)
349521.HCH_04190(+)
349521.HCH_01618(+)
349521.HCH_00690(+)
349521.HCH_05053(+)
349521.HCH_05051(+)
349521.HCH_06593(+)
349521.HCH_05265(+)
349521.HCH_04735(+)
349521.HCH_03850(+)
349521.HCH_05634(+)
349521.HCH_03282(+)
349521.HCH_06014(+)
349521.HCH_02622(+)
349521.HCH_03496(+)
349521.HCH_03497(+)
349521.HCH_04153(+)
349521.HCH_00521(+)
349521.HCH_03873(+)
349521.HCH_05097(+)
349521.HCH_00389(+)
349521.HCH_00383(+)
349521.HCH_06033(+)
349521.HCH_00265(+)
349521.HCH_04447(+)
349521.HCH_01964(+)
349521.HCH_03745(+)
349521.HCH_03817(+)
349521.HCH_03101(+)
349521.HCH_06469(+)
349521.HCH_03246(+)
349521.HCH_04039(+)
349521.HCH_01510(+)
349521.HCH_04348(+)
349521.HCH_03437(+)
349521.HCH_05991(+)
349521.HCH_05507(+)not used
349521.HCH_00120(+)
349521.HCH_01992(+)not used
349521.HCH_03161(+)
349521.HCH_03226(+)
349521.HCH_00920(+)
349521.HCH_06758(+)not used
349521.HCH_02438(+)
349521.HCH_00141(+)
349521.HCH_04148(+)
349521.HCH_03146(+)
349521.HCH_02896(+)
349521.HCH_04499(+)
349521.HCH_03207(+)
349521.HCH_01158(+)
349521.HCH_03361(+)not used
349521.HCH_06654(+)
349521.HCH_06657(+)not used
349521.HCH_06651(+)
349521.HCH_02937(+)
349521.HCH_02932(+)not used
349521.HCH_04689(+)not used
349521.HCH_03413(+)
349521.HCH_01302(+)
349521.HCH_00308(+)
349521.HCH_02450(+)
349521.HCH_05109(+)
349521.HCH_02131(+)
349521.HCH_06102(+)
349521.HCH_03624(+)
349521.HCH_02916(+)
349521.HCH_02919(+)
349521.HCH_01586(+)
349521.HCH_03989(+)
349521.HCH_05127(+)
349521.HCH_05129(+)
349521.HCH_04532(+)
349521.HCH_04457(+)
349521.HCH_02276(+)
349521.HCH_02271(+)
349521.HCH_05723(+)
349521.HCH_01775(+)
349521.HCH_06818(+)
349521.HCH_00642(+)
349521.HCH_06567(+)
349521.HCH_05912(+)
349521.HCH_01341(+)
349521.HCH_04782(+)
349521.HCH_01323(+)
349521.HCH_06777(+)
349521.HCH_06772(+)
349521.HCH_06257(+)
349521.HCH_01905(+)
349521.HCH_05441(+)
349521.HCH_05445(+)
349521.HCH_01131(+)
349521.HCH_00083(+)
349521.HCH_00080(+)
349521.HCH_04282(+)
349521.HCH_00665(+)not used
349521.HCH_03061(+)
349521.HCH_00878(+)
349521.HCH_03049(+)not used
349521.HCH_05161(+)
349521.HCH_07005(+)
349521.HCH_01533(+)
349521.HCH_05896(+)
349521.HCH_06179(+)
349521.HCH_03396(+)
349521.HCH_03394(+)
349521.HCH_03393(+)
349521.HCH_04388(+)
349521.HCH_04384(+)
349521.HCH_04380(+)not used
349521.HCH_01892(+)
349521.HCH_02353(+)
349521.HCH_00850(+)
349521.HCH_00856(+)
349521.HCH_02728(+)
349521.HCH_01744(+)
349521.HCH_06461(+)
349521.HCH_04594(+)
349521.HCH_05183(+)
349521.HCH_02291(+)
349521.HCH_00349(+)
349521.HCH_05408(+)
349521.HCH_05401(+)
349521.HCH_05403(+)
349521.HCH_01717(+)
349521.HCH_01245(+)
349521.HCH_01244(+)
349521.HCH_00598(+)
349521.HCH_00599(+)
349521.HCH_00049(+)
349521.HCH_03561(+)
349521.HCH_01052(+)
349521.HCH_01502(+)
349521.HCH_06408(+)
349521.HCH_05216(+)
349521.HCH_03901(+)
349521.HCH_04165(+)not used
349521.HCH_06312(+)
349521.HCH_04819(+)
349521.HCH_04817(+)
349521.HCH_06275(+)
349521.HCH_02310(+)
349521.HCH_00814(+)
349521.HCH_02760(+)
349521.HCH_05354(+)not used
349521.HCH_01524(+)
349521.HCH_03711(+)
349521.HCH_03969(+)not used
349521.HCH_03718(+)
349521.HCH_01010(+)
349521.HCH_00543(+)
349521.HCH_01204(+)
349521.HCH_00008(+)
349521.HCH_00550(+)
349521.HCH_04274(+)
349521.HCH_01836(+)
349521.HCH_01832(+)
349521.HCH_05640(+)
349521.HCH_00002(+)
349521.HCH_05257(+)
349521.HCH_01548(+)
349521.HCH_00763(+)
349521.HCH_03944(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 2.7 (27/10 KEGG proteins)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 4.0 (32/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================