Metamenu

Effective results for Bacteroides eggerthii DSM 20697 (eggnog40)

Summary

Number of putative secreted proteins: 162
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 46 eukaryotic-like domains, contained in 162 proteins (64 high, 98 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
483216.BACEGG_00992(PF02837) (PF00703) (PF02836) (PF02929)ER
483216.BACEGG_02773(PF02929) (PF02836) (PF00703) (PF02837)ER
483216.BACEGG_00644(PF11721) (PF00703) (PF02836) (PF02837)ER
483216.BACEGG_00640(PF02929) (PF00703) (PF02836) (PF02837)(mitochondrial)
483216.BACEGG_03288(PF11721) (PF00703) (PF02836) (PF02837)ER
483216.BACEGG_00638(PF02929) (PF00703) (PF02836) (PF02837)ER
483216.BACEGG_01458(PF00703) (PF02836) (PF02837)ER
483216.BACEGG_03726(PF00703) (PF02836) (PF02837)ER
483216.BACEGG_00629(PF00703) (PF02836) (PF02837)ER
483216.BACEGG_02274(PF00703) (PF02836) (PF02837)ER
483216.BACEGG_01318PF03629 (PF02837)ER
483216.BACEGG_01316PF03629 (PF02837)ER
483216.BACEGG_01310PF15979 PF03648ER
483216.BACEGG_01955PF15979 PF03648ER
483216.BACEGG_01953PF07477 (PF07488)ER
483216.BACEGG_00138PF07940 (PF16889)ER
483216.BACEGG_00220PF15979 PF03648ER
483216.BACEGG_02125PF07940 (PF16889)(ER)
483216.BACEGG_00238PF07940 (PF16889)ER
483216.BACEGG_01321PF07477 (PF07488)ER
483216.BACEGG_01323PF15979 PF03648ER
483216.BACEGG_03043PF07940 PF16332ER
483216.BACEGG_00061PF07940 (PF16889)ER
483216.BACEGG_01448(PF07470) PF07940ER
483216.BACEGG_00263PF07940 PF16332ER
483216.BACEGG_00274PF07940 PF16332ER
483216.BACEGG_00271PF07940 PF16332ER
483216.BACEGG_03610PF07940 PF16332(mitochondrial)
483216.BACEGG_03296(PF00703) (PF02836)(mitochondrial)
483216.BACEGG_01675PF07940 PF16332ER
483216.BACEGG_00251PF07940 PF16332ER
483216.BACEGG_02283(PF04616)ER
483216.BACEGG_01916(PF04616)ER
483216.BACEGG_02677(PF13905)ER
483216.BACEGG_03643(PF00703)ER
483216.BACEGG_03511(PF14684)ER
483216.BACEGG_03514(PF04616)ER
483216.BACEGG_03219(PF04616)ER; (ER)
483216.BACEGG_02583(PF13905)ER
483216.BACEGG_03527(PF04616)ER
483216.BACEGG_03526(PF04616)ER
483216.BACEGG_02033(PF16387)ER
483216.BACEGG_01918(PF04616)ER
483216.BACEGG_01304(PF04616)ER
483216.BACEGG_01411PF10022(ER)
483216.BACEGG_01410PF10022ER
483216.BACEGG_01418(PF07470)ER
483216.BACEGG_00098(PF04488)(mitochondrial)
483216.BACEGG_00785(PF14684)ER
483216.BACEGG_03202PF03629(mitochondrial)
483216.BACEGG_03662(PF00216)(mitochondrial)
483216.BACEGG_00314(PF09471)ER
483216.BACEGG_02946(PF00216)(mitochondrial)
483216.BACEGG_02302(PF16757)ER
483216.BACEGG_01544(PF04616)ER
483216.BACEGG_01437(PF09471)ER
483216.BACEGG_00237(PF07470)ER
483216.BACEGG_00541(PF13905)ER
483216.BACEGG_01554PF02357(mitochondrial)
483216.BACEGG_01889(PF00216)(mitochondrial)
483216.BACEGG_00062(PF07470)ER
483216.BACEGG_00217(PF16757)ER
483216.BACEGG_00077(PF14684)ER
483216.BACEGG_02229PF03629ER
483216.BACEGG_01537(PF04616)ER
483216.BACEGG_01445(PF07470)ER
483216.BACEGG_00260(PF16757)ER
483216.BACEGG_00863(PF07470)ER
483216.BACEGG_01992PF03629ER
483216.BACEGG_01746(PF16387)ER
483216.BACEGG_01292(PF04616)ER
483216.BACEGG_00873(PF04616)ER
483216.BACEGG_00642PF03629ER
483216.BACEGG_03295PF03629ER
483216.BACEGG_03431(PF03275)(ER)
483216.BACEGG_00256(PF07470)ER
483216.BACEGG_01819(PF13905)ER
483216.BACEGG_03281(PF07470)ER
483216.BACEGG_03282PF10022ER
483216.BACEGG_03289PF15979ER
483216.BACEGG_03427(PF05686)(mitochondrial)
483216.BACEGG_01245(PF13905)ER
483216.BACEGG_00626(PF04616)ER
483216.BACEGG_02478(PF04488)(mitochondrial)
483216.BACEGG_02275(PF00703) (PF02836) (PF02837)
483216.BACEGG_02278PF03629ER
483216.BACEGG_02279PF07940ER
483216.BACEGG_01342(PF12437)(mitochondrial)
483216.BACEGG_00636(PF07470)ER
483216.BACEGG_03246PF03629ER
483216.BACEGG_03249PF07940ER
483216.BACEGG_02866(PF12437)mitochondrial; (mitochondrial)
483216.BACEGG_03398(PF16011)ER
483216.BACEGG_03406(PF07470)ER
483216.BACEGG_02902(PF02971) (PF07837)
483216.BACEGG_01581(PF00216)(plastid)
483216.BACEGG_01699PF02357(mitochondrial)
483216.BACEGG_03087PF01807 PF13155
483216.BACEGG_00403PF01807 PF13155
483216.BACEGG_00888(PF05970) (PF02689)
483216.BACEGG_00140PF07940 PF16332
483216.BACEGG_00094(PF08707) (PF13148)
483216.BACEGG_01313PF07477 (PF07488)
483216.BACEGG_00545PF01807 PF13155
483216.BACEGG_00119PF01807 PF13155
483216.BACEGG_02995PF01807 PF13155
483216.BACEGG_00266PF07940 PF16332
483216.BACEGG_02186(PF08707) (PF13148)
483216.BACEGG_03170PF01807 PF13155
483216.BACEGG_03287(PF07470) PF10022
483216.BACEGG_03410(PF03054)(mitochondrial)
483216.BACEGG_00297(PF02544)(ER)
483216.BACEGG_01917(PF04616)
483216.BACEGG_02870(PF05693)
483216.BACEGG_02053(PF00216)
483216.BACEGG_02290PF02357
483216.BACEGG_02737(PF00216)not used
483216.BACEGG_00613(PF00216)
483216.BACEGG_02335(PF03275)
483216.BACEGG_01023PF13155
483216.BACEGG_02328(PF04432)
483216.BACEGG_01417PF00688
483216.BACEGG_01090PF13155
483216.BACEGG_02134PF02357
483216.BACEGG_02137PF02357
483216.BACEGG_03539PF16269
483216.BACEGG_02000(PF03054)
483216.BACEGG_01314(PF04616)
483216.BACEGG_00317(PF04616)
483216.BACEGG_01400(PF04616)
483216.BACEGG_01954PF15979not used
483216.BACEGG_01952PF07477not used
483216.BACEGG_00048(PF03054)
483216.BACEGG_01091PF13155
483216.BACEGG_01542(PF04616)
483216.BACEGG_01320PF07477not used
483216.BACEGG_01322PF15979not used
483216.BACEGG_02578(PF05970)
483216.BACEGG_02781(PF03275)
483216.BACEGG_02961PF02357
483216.BACEGG_02369(PF04616)
483216.BACEGG_03150(PF01697)
483216.BACEGG_02352PF02357
483216.BACEGG_01194(PF00216)
483216.BACEGG_03745PF02357
483216.BACEGG_00902(PF01715)
483216.BACEGG_03177(PF08707)
483216.BACEGG_03758PF02357
483216.BACEGG_01289(PF01715)
483216.BACEGG_01919(PF04616)
483216.BACEGG_03100(PF00216)
483216.BACEGG_02414(PF13148)
483216.BACEGG_03285(PF04616)
483216.BACEGG_03283PF10022
483216.BACEGG_02735(PF00216)
483216.BACEGG_02460PF02357
483216.BACEGG_02266PF03629
483216.BACEGG_01481(PF00216)
483216.BACEGG_02476(PF04432)
483216.BACEGG_01131(PF00216)
483216.BACEGG_01344(PF03630)
483216.BACEGG_00745(PF16314)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================