Effective results for Bacillus megaterium QM B1551 (eggnog40)

Summary

Number of putative secreted proteins: 161
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 32 eukaryotic-like domains, contained in 161 proteins (10 high, 151 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
545693.BMQ_2965(PF06725) (PF01476)ER; (ER)
545693.BMQ_0476(PF06725) (PF01476)ER; (ER)
545693.BMQ_2282(PF06725) (PF01476)ER
545693.BMQ_2723(PF06725) (PF01476)ER
545693.BMQ_3952(PF00324)(ER)
545693.BMQ_2145(PF01476)ER
545693.BMQ_2894(PF12051)ER
545693.BMQ_4380(PF13673)mitochondrial; (mitochondrial)
545693.BMQ_2964(PF01476)ER
545693.BMQ_0230(PF01740)(ER)
545693.BMQ_1284(PF01476)ER
545693.BMQ_0927(PF06725)ER
545693.BMQ_0455(PF00324)(ER)
545693.BMQ_0356(PF01373)ER
545693.BMQ_1089(PF00324)ER; (ER)
545693.BMQ_4962(PF02681)ER
545693.BMQ_4366(PF01476)ER
545693.BMQ_0466(PF05684)ER
545693.BMQ_3252(PF14040)ER
545693.BMQ_0899PF14662 (PF12051)(ER)
545693.BMQ_5133(PF01476)(ER)
545693.BMQ_4091(PF01476)ER
545693.BMQ_3875(PF14040)ER
545693.BMQ_3195(PF01476)ER
545693.BMQ_1826(PF14040)ER
545693.BMQ_5025(PF06925)(mitochondrial)
545693.BMQ_1524(PF12606)ER; not used
545693.BMQ_2811(PF13673)(mitochondrial)
545693.BMQ_0898(PF13673)(plastid)
545693.BMQ_0342(PF01740)(ER)
545693.BMQ_2101PF12638(plastid)
545693.BMQ_3953(PF05684)
545693.BMQ_3958(PF13673)
545693.BMQ_2092PF10058not used
545693.BMQ_1948(PF05076)
545693.BMQ_2967(PF06925)
545693.BMQ_2633(PF00390)
545693.BMQ_0233(PF01740)
545693.BMQ_2708(PF00313)
545693.BMQ_1726(PF01476)
545693.BMQ_2080(PF00390)
545693.BMQ_3282(PF13673)
545693.BMQ_2884(PF01740)
545693.BMQ_4393(PF01740)
545693.BMQ_0481(PF13673)
545693.BMQ_0711(PF00324)
545693.BMQ_0138PF00297
545693.BMQ_4249(PF00215)
545693.BMQ_3428(PF01969)
545693.BMQ_0229(PF01740)
545693.BMQ_2711(PF00313)
545693.BMQ_1198(PF13673)
545693.BMQ_0827(PF00324)
545693.BMQ_3582(PF00324)
545693.BMQ_1854(PF00923)
545693.BMQ_0587(PF13673)
545693.BMQ_3748(PF00390)
545693.BMQ_0454(PF12787)
545693.BMQ_3969(PF13673)
545693.BMQ_3966(PF00324)
545693.BMQ_3964(PF13673)
545693.BMQ_3965(PF13673)
545693.BMQ_4649(PF01476)
545693.BMQ_1671(PF06925)
545693.BMQ_2509(PF13673)
545693.BMQ_2376(PF13673)
545693.BMQ_2379(PF00324)
545693.BMQ_3648(PF00923)
545693.BMQ_0592(PF12787)
545693.BMQ_0021(PF01476)
545693.BMQ_1462(PF02681)
545693.BMQ_1468(PF00313)
545693.BMQ_3916(PF05076)
545693.BMQ_5174(PF00923)
545693.BMQ_3820(PF00324)
545693.BMQ_2519(PF13673)
545693.BMQ_4963(PF06725)
545693.BMQ_5188(PF03851)
545693.BMQ_4680(PF01476)
545693.BMQ_4024(PF01740)
545693.BMQ_2826(PF14328)
545693.BMQ_3487(PF01740)
545693.BMQ_3488(PF00313)
545693.BMQ_4202PF02150
545693.BMQ_3061(PF01740)
545693.BMQ_3067(PF01740)
545693.BMQ_3064(PF13673)
545693.BMQ_1792(PF00313)
545693.BMQ_0319(PF00324)
545693.BMQ_1318(PF01476)
545693.BMQ_2536(PF00324)
545693.BMQ_2328(PF00923)
545693.BMQ_3496(PF01740)
545693.BMQ_3259(PF00923)
545693.BMQ_3141(PF01476)
545693.BMQ_5098(PF13673)
545693.BMQ_4414(PF14748)
545693.BMQ_3819(PF00324)
545693.BMQ_3815(PF00313)
545693.BMQ_4778(PF00390)
545693.BMQ_4578(PF14748)
545693.BMQ_4792(PF12787)
545693.BMQ_0891(PF00215)
545693.BMQ_0664(PF00324)
545693.BMQ_1423(PF00313)
545693.BMQ_1759(PF01740)
545693.BMQ_1758(PF01740)
545693.BMQ_1205(PF13673)
545693.BMQ_2012(PF14748)
545693.BMQ_4147(PF01687)
545693.BMQ_3459(PF13673)
545693.BMQ_4097(PF01476)
545693.BMQ_1699(PF00313)
545693.BMQ_1690(PF01740)
545693.BMQ_2310(PF01740)
545693.BMQ_3518(PF13673)
545693.BMQ_5200(PF13921)
545693.BMQ_5209PF12638
545693.BMQ_4529(PF06941)
545693.BMQ_1004PF12638
545693.BMQ_3994(PF06941)
545693.BMQ_3180(PF00313)
545693.BMQ_0135PF00338
545693.BMQ_0136PF00297
545693.BMQ_0137PF00338
545693.BMQ_2927(PF01740)
545693.BMQ_0981(PF00313)
545693.BMQ_3507(PF13673)
545693.BMQ_0745(PF13673)
545693.BMQ_1538(PF00215)
545693.BMQ_5104(PF00324)
545693.BMQ_3980(PF13673)
545693.BMQ_3986(PF01476)
545693.BMQ_2068(PF01687)
545693.BMQ_0222(PF03851)
545693.BMQ_2111(PF01740)
545693.BMQ_3534(PF13673)
545693.BMQ_3429(PF01969)
545693.BMQ_3401(PF00313)
545693.BMQ_2663(PF13673)
545693.BMQ_1803(PF00324)
545693.BMQ_1575(PF00477)
545693.BMQ_1578(PF00324)
545693.BMQ_2598(PF01740)
545693.BMQ_2287(PF14748)
545693.BMQ_1629(PF13673)
545693.BMQ_2057(PF00390)
545693.BMQ_2942(PF00215)
545693.BMQ_4291(PF13921)
545693.BMQ_3090(PF00390)
545693.BMQ_0764(PF00324)
545693.BMQ_1498(PF01476)
545693.BMQ_1569(PF00324)
545693.BMQ_1703(PF00313)
545693.BMQ_1034(PF05076)
545693.BMQ_1634(PF13673)
545693.BMQ_3898(PF00324)
545693.BMQ_2049(PF00324)
545693.BMQ_3399(PF00313)
545693.BMQ_1822(PF00313)
545693.BMQ_0390(PF00324)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================