Metamenu

Effective results for Treponema azotonutricium ZAS-9 (eggnog40)

Summary

Number of putative secreted proteins: 132
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 34 eukaryotic-like domains, contained in 132 proteins (34 high, 98 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
545695.TREAZ_2972(PF16334) (PF16335) (PF17168) (PF08760)ER
545695.TREAZ_2027(PF01074) (PF07748) (PF09261)(mitochondrial)
545695.TREAZ_1357(PF13431)ER
545695.TREAZ_2277(PF13173)mitochondrial
545695.TREAZ_2086PF01208mitochondrial
545695.TREAZ_3590(PF12733)ER
545695.TREAZ_3637(PF09861)(ER)
545695.TREAZ_1155(PF12733)ER
545695.TREAZ_1154(PF12733)ER; (mitochondrial)
545695.TREAZ_1401(PF01074) (PF07748) (PF09261)
545695.TREAZ_2853(PF00137)ER
545695.TREAZ_1132(PF12733)ER
545695.TREAZ_2567PF01208mitochondrial
545695.TREAZ_0857(PF01554)ER
545695.TREAZ_2155(PF13173)ER; (ER)
545695.TREAZ_1866PF01208(mitochondrial)
545695.TREAZ_2584(PF01554)ER
545695.TREAZ_3430(PF01554)(mitochondrial); mitochondrial
545695.TREAZ_2755(PF01074) (PF09261) (PF07748)
545695.TREAZ_2756(PF01074) (PF07748) (PF09261)
545695.TREAZ_3403(PF00137)ER
545695.TREAZ_2616(PF01554)(ER); (mitochondrial)
545695.TREAZ_1659PF01208(ER)
545695.TREAZ_1720(PF00148)(mitochondrial)
545695.TREAZ_2605(PF01074) (PF09261) (PF07748)
545695.TREAZ_0342(PF01554)ER
545695.TREAZ_0067(PF03321)(ER); (mitochondrial)
545695.TREAZ_1754(PF03321)ER
545695.TREAZ_1753(PF03321)ER
545695.TREAZ_3090(PF13173)mitochondrial
545695.TREAZ_2134(PF01554)ER
545695.TREAZ_2363(PF10442) (PF08495)
545695.TREAZ_0730(PF13173)(mitochondrial)
545695.TREAZ_0104(PF00137)(plastid)
545695.TREAZ_0100(PF02874) (PF16886)
545695.TREAZ_2210(PF03630)(plastid)
545695.TREAZ_2197(PF10442) (PF08495)
545695.TREAZ_2443(PF10442) (PF08495)
545695.TREAZ_2041(PF10442) (PF08495)
545695.TREAZ_3576(PF10442) (PF08495)
545695.TREAZ_1115PF03727 PF00349
545695.TREAZ_2034(PF10442) (PF08495)
545695.TREAZ_2765PF01208(mitochondrial)
545695.TREAZ_3176(PF01554)(ER)
545695.TREAZ_3220(PF00148)(plastid)
545695.TREAZ_2741(PF16011)(plastid)
545695.TREAZ_3406(PF02874) (PF16886)
545695.TREAZ_0513(PF13173)(mitochondrial)
545695.TREAZ_1727(PF01554)(ER)
545695.TREAZ_2730(PF13173)(mitochondrial)
545695.TREAZ_2711(PF12733)
545695.TREAZ_3044(PF13173)
545695.TREAZ_1510PF01208
545695.TREAZ_1194PF01208
545695.TREAZ_2279PF01208
545695.TREAZ_2278PF01208
545695.TREAZ_2872PF01208
545695.TREAZ_0102(PF01813)
545695.TREAZ_0101(PF02874)
545695.TREAZ_0743PF01208
545695.TREAZ_1189(PF09861)
545695.TREAZ_2260(PF00148)
545695.TREAZ_0757(PF13173)
545695.TREAZ_3599PF13271
545695.TREAZ_0027PF01208
545695.TREAZ_1979(PF03235)
545695.TREAZ_1978(PF03235)
545695.TREAZ_1400PF01208
545695.TREAZ_2850(PF02874)
545695.TREAZ_2458(PF02906)
545695.TREAZ_3613PF01208
545695.TREAZ_2528(PF13173)
545695.TREAZ_1897(PF09861)
545695.TREAZ_2848(PF02874)
545695.TREAZ_2334(PF10974)
545695.TREAZ_2323PF01208
545695.TREAZ_1046(PF03235)
545695.TREAZ_2233PF01208
545695.TREAZ_2238(PF02906)
545695.TREAZ_3540(PF13173)
545695.TREAZ_3491PF01208
545695.TREAZ_1548(PF12646)
545695.TREAZ_1055(PF03235)
545695.TREAZ_1687PF13271
545695.TREAZ_1201(PF01554)
545695.TREAZ_1117(PF01554)
545695.TREAZ_1116(PF01554)
545695.TREAZ_2569PF01208
545695.TREAZ_3217(PF00148)
545695.TREAZ_3218(PF00148)
545695.TREAZ_3219(PF00148)
545695.TREAZ_1696(PF01554)
545695.TREAZ_1690PF01208
545695.TREAZ_1854(PF01554)
545695.TREAZ_1451(PF13173)
545695.TREAZ_2520(PF03235)
545695.TREAZ_1862(PF01554)
545695.TREAZ_1481PF01208
545695.TREAZ_1480(PF00148)
545695.TREAZ_1719(PF00148)
545695.TREAZ_2742PF01208
545695.TREAZ_2342(PF13173)
545695.TREAZ_1479(PF00148)
545695.TREAZ_1475PF01208
545695.TREAZ_1477PF01208
545695.TREAZ_1496(PF00148)
545695.TREAZ_1495(PF00148)
545695.TREAZ_2002(PF02906)
545695.TREAZ_2003(PF02906)
545695.TREAZ_2759PF01208
545695.TREAZ_2757PF01208
545695.TREAZ_2593(PF03235)
545695.TREAZ_3407(PF02874)
545695.TREAZ_0265(PF11074)
545695.TREAZ_1395(PF01554)
545695.TREAZ_0863(PF16314)
545695.TREAZ_2430(PF13151)
545695.TREAZ_3415(PF01813)
545695.TREAZ_3250(PF02906)
545695.TREAZ_0072(PF10974)
545695.TREAZ_1653PF01208
545695.TREAZ_2425(PF08495)
545695.TREAZ_3394PF01208
545695.TREAZ_3393PF01208
545695.TREAZ_0888(PF02874)
545695.TREAZ_1758PF13271
545695.TREAZ_1756PF13271
545695.TREAZ_2259(PF00148)
545695.TREAZ_3076PF13271
545695.TREAZ_3382(PF01554)
545695.TREAZ_0724(PF14336)
545695.TREAZ_1637(PF13431)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================