Effective results for Ilyobacter polytropus DSM 2926 (eggnog40)

Summary

Number of putative secreted proteins: 32
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 13 eukaryotic-like domains, contained in 32 proteins (2 high, 30 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
572544.Ilyop_0409(PF03522)ER
572544.Ilyop_1421(PF02906)(mitochondrial)
572544.Ilyop_0026(PF17147)(mitochondrial)
572544.Ilyop_1217(PF01257)(mitochondrial)
572544.Ilyop_0689(PF02906) (PF02256)
572544.Ilyop_1221(PF02906) (PF02256)
572544.Ilyop_0556(PF05034) (PF07476)
572544.Ilyop_0635(PF02906) (PF02256)
572544.Ilyop_0628(PF02906) (PF02256)
572544.Ilyop_0543(PF17147)(mitochondrial)
572544.Ilyop_0904(PF11074)
572544.Ilyop_0691(PF01257)
572544.Ilyop_1098(PF17147)
572544.Ilyop_0042(PF00301)not used
572544.Ilyop_0040(PF00301)not used
572544.Ilyop_0041(PF00301)not used
572544.Ilyop_1401(PF01257)
572544.Ilyop_1220(PF01257)
572544.Ilyop_0799PF03071
572544.Ilyop_1331(PF00301)not used
572544.Ilyop_0086(PF17147)
572544.Ilyop_1743(PF07892)
572544.Ilyop_1744(PF07892)
572544.Ilyop_1218(PF02906)
572544.Ilyop_0346(PF01257)
572544.Ilyop_0627(PF01257)
572544.Ilyop_0625(PF01257)
572544.Ilyop_0147(PF06176)
572544.Ilyop_1738(PF07892)
572544.Ilyop_0106(PF17147)
572544.Ilyop_0590PF06888
572544.Ilyop_0595(PF00301)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================