Effective results for Thermoanaerobacter italicus Ab9 (eggnog40)

Summary

Number of putative secreted proteins: 51
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 12 eukaryotic-like domains, contained in 51 proteins (14 high, 37 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
580331.Thit_1972(PF05598)(ER)
580331.Thit_0420(PF07837) (PF02971)
580331.Thit_0824(PF07085)
580331.Thit_0821(PF07085)
580331.Thit_1517(PF01409)
580331.Thit_1516(PF01409)
580331.Thit_1367(PF00078)
580331.Thit_1364(PF00078)
580331.Thit_1563PF00514
580331.Thit_0534(PF05598)
580331.Thit_2399(PF00078)
580331.Thit_1179(PF05598)
580331.Thit_1928(PF00078)
580331.Thit_0990PF13936
580331.Thit_2281PF13936
580331.Thit_1550(PF00078)
580331.Thit_0288(PF05168)
580331.Thit_1838(PF05598)
580331.Thit_1235(PF05598)
580331.Thit_1825(PF05598)
580331.Thit_1824(PF05168)
580331.Thit_2023(PF05598)
580331.Thit_2114PF13936
580331.Thit_2116(PF05168)
580331.Thit_2336(PF01991)
580331.Thit_2244(PF05168)
580331.Thit_0663(PF00078)
580331.Thit_0080(PF00078)
580331.Thit_2251(PF00078)
580331.Thit_0418(PF05598)
580331.Thit_2132(PF07085)
580331.Thit_2133PF06888
580331.Thit_0934(PF12862)
580331.Thit_0799PF13936
580331.Thit_0648PF13936
580331.Thit_1892(PF05598)
580331.Thit_2012PF13936
580331.Thit_2274(PF05598)
580331.Thit_1781PF13936
580331.Thit_1888(PF00078)
580331.Thit_1314(PF05598)
580331.Thit_1633(PF07085)
580331.Thit_0230PF13936
580331.Thit_0750(PF00078)
580331.Thit_0599PF13936
580331.Thit_1968(PF05598)
580331.Thit_2182PF13936
580331.Thit_1618PF13936
580331.Thit_0103(PF00078)
580331.Thit_0580PF13936
580331.Thit_0560(PF00078)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================