Effective results for Mobiluncus mulieris 28-1 (eggnog40)

Summary

Number of putative secreted proteins: 22
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 22 proteins (16 high, 6 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
596328.HMPREF0578_1275(PF07479) (PF01210)ER
596328.HMPREF0578_1933(PF07479) (PF01210)(ER)
596328.HMPREF0578_1332PF13173(mitochondrial); mitochondrial
596328.HMPREF0578_1571(PF07479) (PF01210)(ER)
596328.HMPREF0578_1836PF13173mitochondrial
596328.HMPREF0578_1415PF13173ER
596328.HMPREF0578_0456PF13173(mitochondrial)
596328.HMPREF0578_0513PF13173(mitochondrial)
596328.HMPREF0578_1840(PF03423)
596328.HMPREF0578_1023PF13173
596328.HMPREF0578_1164PF13173
596328.HMPREF0578_0982PF04587
596328.HMPREF0578_1794PF13173
596328.HMPREF0578_1355PF13173
596328.HMPREF0578_0718PF13173
596328.HMPREF0578_2001PF13173
596328.HMPREF0578_0526PF13173
596328.HMPREF0578_1924PF13173
596328.HMPREF0578_1331PF13173
596328.HMPREF0578_0843(PF00958)
596328.HMPREF0578_1192PF13173
596328.HMPREF0578_0482(PF00958)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================