Effective results for Mesotoga prima MesG1.Ag.4.2 (eggnog40)

Summary

Number of putative secreted proteins: 59
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 27 eukaryotic-like domains, contained in 59 proteins (9 high, 50 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
660470.ThebaDRAFT_2538(PF04998) (PF00623) (PF00562)(ER)
660470.ThebaDRAFT_0806PF03577ER
660470.ThebaDRAFT_0805PF03577ER
660470.ThebaDRAFT_0809PF03577ER
660470.ThebaDRAFT_0348PF03577ER
660470.ThebaDRAFT_2188(PF08843)(mitochondrial)
660470.ThebaDRAFT_0909(PF09394)ER
660470.ThebaDRAFT_1478(PF12483)ER
660470.ThebaDRAFT_0251PF03577ER
660470.ThebaDRAFT_2249(PF09394)ER
660470.ThebaDRAFT_1451(PF14512)(mitochondrial)
660470.ThebaDRAFT_0980(PF10142)(mitochondrial)
660470.ThebaDRAFT_0347PF03577ER
660470.ThebaDRAFT_2568(PF02275)ER
660470.ThebaDRAFT_0782(PF09394)ER
660470.ThebaDRAFT_0487(PF07837) (PF02971)
660470.ThebaDRAFT_2199(PF02275)(plastid)
660470.ThebaDRAFT_0110(PF04998) (PF00623)
660470.ThebaDRAFT_0715(PF12724)(mitochondrial)
660470.ThebaDRAFT_1807(PF11074)(mitochondrial)
660470.ThebaDRAFT_1201(PF01535) PF12862
660470.ThebaDRAFT_2172(PF08843)(mitochondrial)
660470.ThebaDRAFT_1213(PF03266)
660470.ThebaDRAFT_0977(PF14512)
660470.ThebaDRAFT_0010(PF02915)
660470.ThebaDRAFT_2453(PF03437)
660470.ThebaDRAFT_2454(PF03437)
660470.ThebaDRAFT_0359(PF02915)
660470.ThebaDRAFT_2198(PF02275)
660470.ThebaDRAFT_1895(PF02317)
660470.ThebaDRAFT_0111(PF00562)
660470.ThebaDRAFT_0934(PF03437)
660470.ThebaDRAFT_2465(PF02915)
660470.ThebaDRAFT_1728(PF12724)
660470.ThebaDRAFT_2386(PF08843)
660470.ThebaDRAFT_1861(PF01637)
660470.ThebaDRAFT_0409(PF12646)
660470.ThebaDRAFT_0872(PF14249)
660470.ThebaDRAFT_2347(PF12724)
660470.ThebaDRAFT_1902(PF02317)
660470.ThebaDRAFT_0643(PF02915)
660470.ThebaDRAFT_2004(PF12724)
660470.ThebaDRAFT_0864(PF00862)
660470.ThebaDRAFT_2353(PF01637)
660470.ThebaDRAFT_2385(PF08843)
660470.ThebaDRAFT_0072(PF09419)
660470.ThebaDRAFT_1581(PF09752)
660470.ThebaDRAFT_1927(PF08309)
660470.ThebaDRAFT_1926(PF08309)
660470.ThebaDRAFT_1924(PF08309)
660470.ThebaDRAFT_1921(PF08309)
660470.ThebaDRAFT_1559(PF08843)
660470.ThebaDRAFT_0998PF03577
660470.ThebaDRAFT_2377(PF08843)
660470.ThebaDRAFT_2376(PF08843)
660470.ThebaDRAFT_1122(PF01637)
660470.ThebaDRAFT_2419(PF02915)
660470.ThebaDRAFT_1200PF12862
660470.ThebaDRAFT_0788(PF02915)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================