Effective results for Prevotella multisaccharivorax DSM 17128 (eggnog40)

Summary

Number of putative secreted proteins: 103
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 24 eukaryotic-like domains, contained in 103 proteins (1 high, 102 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
688246.Premu_2319(PF00728) (PF02838)ER
688246.Premu_2368(PF00728) (PF02838)ER
688246.Premu_2369(PF00728) (PF02838)ER
688246.Premu_1033(PF00728) (PF02838)ER
688246.Premu_1562(PF00728) (PF02838)(ER)
688246.Premu_1828(PF00728) (PF02838)ER
688246.Premu_1829(PF00728) (PF02838)(mitochondrial); (plastid)
688246.Premu_0798(PF02485)(mitochondrial)
688246.Premu_0782(PF03051)(mitochondrial)
688246.Premu_0935(PF00728) (PF02838)ER
688246.Premu_0732(PF03412)(mitochondrial)
688246.Premu_2715(PF07168)ER
688246.Premu_0461(PF13905)ER
688246.Premu_0857(PF13905)ER
688246.Premu_0067PF08017(mitochondrial)
688246.Premu_1077(PF03051)ER
688246.Premu_0656(PF00328)ER
688246.Premu_0495(PF00728) (PF02838)(mitochondrial)
688246.Premu_1487(PF12256)ER
688246.Premu_2471(PF00328)ER
688246.Premu_2274(PF13905)ER
688246.Premu_2275(PF13905)ER
688246.Premu_2839(PF02838)ER
688246.Premu_0880(PF00328)ER
688246.Premu_0176(PF14771)ER
688246.Premu_0893(PF02485)(mitochondrial)
688246.Premu_1456(PF01610)(mitochondrial)
688246.Premu_1480(PF12256)(mitochondrial)
688246.Premu_0426(PF00216)
688246.Premu_2034(PF13155)
688246.Premu_2038(PF03432)
688246.Premu_2492(PF12762)
688246.Premu_1780(PF13155)
688246.Premu_1783(PF03432)
688246.Premu_0787(PF00078)
688246.Premu_1508(PF01624)
688246.Premu_2311(PF00216)
688246.Premu_1799(PF00078)
688246.Premu_1792(PF03432)
688246.Premu_1795(PF13155)
688246.Premu_1948(PF01610)
688246.Premu_2764(PF00216)
688246.Premu_1631(PF03412)
688246.Premu_1635(PF03412)
688246.Premu_0213(PF00078)
688246.Premu_1403(PF00078)
688246.Premu_1085(PF01715)
688246.Premu_1532(PF00216)
688246.Premu_1531(PF00216)
688246.Premu_2568(PF13155)
688246.Premu_1438(PF13155)
688246.Premu_1435(PF01610)
688246.Premu_1182(PF00078)
688246.Premu_2516(PF03412)
688246.Premu_1514(PF00216)
688246.Premu_1425(PF12762)
688246.Premu_2435(PF03412)
688246.Premu_2237(PF00216)
688246.Premu_1451(PF12762)
688246.Premu_1511(PF13155)
688246.Premu_0657(PF01624)
688246.Premu_2407(PF01610)
688246.Premu_2393(PF03412)
688246.Premu_2083(PF13155)
688246.Premu_2081(PF01610)
688246.Premu_2086(PF01624)
688246.Premu_1061(PF00078)
688246.Premu_1442(PF03432)
688246.Premu_1717(PF13155)
688246.Premu_0530(PF01610)
688246.Premu_1882(PF01610)
688246.Premu_2520(PF12762)
688246.Premu_2416(PF12762)
688246.Premu_2098(PF00078)
688246.Premu_1872(PF00078)
688246.Premu_1474(PF12256)not used
688246.Premu_1499(PF00078)
688246.Premu_0705(PF00216)
688246.Premu_0836(PF00078)
688246.Premu_1722(PF03432)
688246.Premu_1001(PF03051)
688246.Premu_2119(PF01610)not used
688246.Premu_0734(PF01610)
688246.Premu_0289(PF00078)
688246.Premu_2078(PF00216)
688246.Premu_1743(PF01715)
688246.Premu_1931(PF03630)
688246.Premu_0199(PF00078)
688246.Premu_0757(PF13086)
688246.Premu_0579(PF03412)
688246.Premu_2054(PF01610)
688246.Premu_1909(PF05693)
688246.Premu_2837(PF16011)
688246.Premu_2833(PF16314)
688246.Premu_2122(PF01610)
688246.Premu_1169(PF12762)
688246.Premu_1161(PF00216)
688246.Premu_0564(PF13086)
688246.Premu_2024(PF01610)
688246.Premu_2029(PF13086)
688246.Premu_2487(PF12762)
688246.Premu_1598(PF03432)
688246.Premu_1689(PF00078)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================