Effective results for Turicibacter sanguinis PC909 (eggnog40)

Summary

Number of putative secreted proteins: 73
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 22 eukaryotic-like domains, contained in 73 proteins (8 high, 65 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
702450.CUW_1460(PF06925) (PF04101)(ER)
702450.CUW_1204(PF04101) (PF06925)(mitochondrial)
702450.CUW_0218(PF01554)(ER)
702450.CUW_2570(PF01554)ER
702450.CUW_0868(PF01554)ER
702450.CUW_0043(PF01554)ER
702450.CUW_1629(PF16403)(mitochondrial)
702450.CUW_2227(PF01554)ER
702450.CUW_0127(PF05935)ER
702450.CUW_0800(PF04892)ER
702450.CUW_2665(PF12740)ER
702450.CUW_1845PF07460(mitochondrial)
702450.CUW_2554(PF12740)ER
702450.CUW_1389(PF01554)ER
702450.CUW_2280(PF16403)ER
702450.CUW_2073(PF01554)ER; (ER)
702450.CUW_2759(PF04101)(ER)
702450.CUW_2582(PF05935)ER
702450.CUW_2637(PF04892)ER
702450.CUW_1221(PF02275)mitochondrial; (mitochondrial)
702450.CUW_0770(PF01554)ER
702450.CUW_1544(PF04892)ER
702450.CUW_1201(PF11070)ER
702450.CUW_1974(PF16403)ER
702450.CUW_0932(PF01554)ER; (ER)
702450.CUW_2769(PF01554)ER
702450.CUW_1945(PF04892)ER
702450.CUW_2306(PF16403)ER
702450.CUW_0923(PF04892)ER
702450.CUW_0925(PF04892)ER
702450.CUW_1290(PF00163)(mitochondrial); not used
702450.CUW_0035(PF01554)(plastid)
702450.CUW_2620(PF01554)(ER)
702450.CUW_1584(PF04101)(mitochondrial)
702450.CUW_2243PF14311not used
702450.CUW_1889(PF14249)
702450.CUW_2684PF08513
702450.CUW_0135(PF01554)
702450.CUW_0918(PF01554)
702450.CUW_2211(PF02275)
702450.CUW_0648PF14311
702450.CUW_0100(PF09359)
702450.CUW_1844(PF13597)
702450.CUW_1846(PF13597)
702450.CUW_1848(PF13597)
702450.CUW_1289(PF00163)
702450.CUW_1660(PF04892)
702450.CUW_2557(PF02275)
702450.CUW_2063(PF01712)
702450.CUW_2060(PF01712)
702450.CUW_2264PF12638
702450.CUW_0026(PF09359)
702450.CUW_2271PF12638
702450.CUW_2851PF14311not used
702450.CUW_1248(PF12513)
702450.CUW_1569(PF01554)
702450.CUW_0121(PF01554)
702450.CUW_1913(PF01554)
702450.CUW_0959(PF01554)
702450.CUW_0312(PF01554)
702450.CUW_0224(PF02275)
702450.CUW_0427(PF01554)
702450.CUW_1218(PF01554)
702450.CUW_0230(PF06925)
702450.CUW_0231(PF04101)
702450.CUW_2792(PF04101)
702450.CUW_2778(PF01712)
702450.CUW_2777(PF01712)
702450.CUW_2178(PF06189)
702450.CUW_2176(PF06189)
702450.CUW_2170(PF03644)
702450.CUW_0441PF05691
702450.CUW_2765(PF01554)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================