Effective results for Faecalibacterium prausnitzii L2-6 (eggnog40)

Summary

Number of putative secreted proteins: 61
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 61 proteins (1 high, 60 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
718252.FP2_09240(PF03432)(mitochondrial)
718252.FP2_01410(PF12646)(ER)
718252.FP2_19800(PF05697) (PF05698)
718252.FP2_07400(PF05697) (PF05698)
718252.FP2_24470PF16994(mitochondrial)
718252.FP2_18180(PF00239)
718252.FP2_12700(PF00239)
718252.FP2_20230(PF02195)
718252.FP2_19140(PF03432)
718252.FP2_16000(PF03054)
718252.FP2_19560(PF02195)
718252.FP2_03800(PF01880)
718252.FP2_24430(PF03054)
718252.FP2_27630(PF00239)
718252.FP2_00200(PF03432)
718252.FP2_15840(PF01880)
718252.FP2_03650(PF00239)
718252.FP2_03300(PF02195)
718252.FP2_08910(PF03432)
718252.FP2_09460(PF02195)
718252.FP2_00920(PF02195)
718252.FP2_17170(PF00239)
718252.FP2_00770(PF02195)
718252.FP2_04460(PF03432)
718252.FP2_01160(PF00239)
718252.FP2_28890(PF00239)
718252.FP2_22030(PF00239)
718252.FP2_22270(PF00239)
718252.FP2_00800(PF02195)
718252.FP2_19720(PF01807)
718252.FP2_28260(PF02195)
718252.FP2_26840(PF05698)
718252.FP2_04800(PF02195)
718252.FP2_13330(PF00239)
718252.FP2_22290(PF13151)
718252.FP2_22740(PF03432)
718252.FP2_10870(PF00239)
718252.FP2_26070(PF05698)
718252.FP2_04030(PF00239)not used
718252.FP2_22510(PF00239)
718252.FP2_18240(PF01807)
718252.FP2_15760(PF00239)
718252.FP2_29980(PF00239)
718252.FP2_13350(PF00239)
718252.FP2_21330(PF00239)
718252.FP2_14170(PF03432)
718252.FP2_21840(PF02195)
718252.FP2_08990(PF00239)
718252.FP2_30010(PF00239)
718252.FP2_28480(PF01807)
718252.FP2_08500(PF00239)
718252.FP2_09050(PF02195)
718252.FP2_29840(PF03432)
718252.FP2_20200(PF02195)
718252.FP2_04340(PF00239)
718252.FP2_13360(PF00239)
718252.FP2_03230(PF00239)
718252.FP2_21030(PF03054)
718252.FP2_17640(PF01880)
718252.FP2_22120(PF00239)
718252.FP2_18710(PF01807)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================