Metamenu

Effective results for Peptoniphilus sp. oral taxon 375 str. F0436 (eggnog40)

Summary

Number of putative secreted proteins: 75
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 16 eukaryotic-like domains, contained in 75 proteins (26 high, 49 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
879308.HMPREF9130_0210(PF01813)(mitochondrial)
879308.HMPREF9130_0030PF13518mitochondrial
879308.HMPREF9130_0335(PF00665)(mitochondrial)
879308.HMPREF9130_1797(PF05833)(mitochondrial)
879308.HMPREF9130_1958(PF01715)mitochondrial; (mitochondrial)
879308.HMPREF9130_0780(PF14478)ER
879308.HMPREF9130_0952(PF02415)ER
879308.HMPREF9130_1642(PF11070)ER
879308.HMPREF9130_0218(PF01496)(ER)
879308.HMPREF9130_0022(PF00665) (PF13276)
879308.HMPREF9130_2150(PF00665) (PF13276)
879308.HMPREF9130_0029(PF00665) (PF13276)
879308.HMPREF9130_0540(PF00665)(mitochondrial)
879308.HMPREF9130_0368(PF00665) (PF13276)
879308.HMPREF9130_1691(PF00665) (PF13276)
879308.HMPREF9130_1697(PF00665)(mitochondrial)
879308.HMPREF9130_0580(PF00665) (PF13276)
879308.HMPREF9130_2057(PF00665) (PF13276)
879308.HMPREF9130_0591(PF00665) (PF13276)
879308.HMPREF9130_0599(PF00665) (PF13276)
879308.HMPREF9130_1357(PF01813)(mitochondrial)
879308.HMPREF9130_1666(PF00665) (PF13276)
879308.HMPREF9130_1462(PF00665) (PF13276)
879308.HMPREF9130_0073PF13518 (PF13276)
879308.HMPREF9130_1299(PF00665) (PF13276)
879308.HMPREF9130_0246(PF00665) (PF13276)
879308.HMPREF9130_1446(PF00665)(mitochondrial)
879308.HMPREF9130_1626(PF00665) (PF13276)
879308.HMPREF9130_1623(PF00665) (PF13276)
879308.HMPREF9130_0981(PF00665) (PF13276)
879308.HMPREF9130_0050(PF00665)(mitochondrial)
879308.HMPREF9130_0212(PF16886)
879308.HMPREF9130_0213(PF01990)
879308.HMPREF9130_0214(PF01992)
879308.HMPREF9130_1078(PF12646)
879308.HMPREF9130_0145(PF14478)
879308.HMPREF9130_0334PF13518
879308.HMPREF9130_0331PF13518
879308.HMPREF9130_0332(PF13276)
879308.HMPREF9130_1798(PF05833)
879308.HMPREF9130_1795(PF05833)
879308.HMPREF9130_1796(PF05833)
879308.HMPREF9130_0023PF13518
879308.HMPREF9130_2151PF13518
879308.HMPREF9130_0782(PF14478)
879308.HMPREF9130_0541PF13518
879308.HMPREF9130_1301(PF14512)
879308.HMPREF9130_1959(PF01715)
879308.HMPREF9130_1687(PF13276)
879308.HMPREF9130_1689PF13518
879308.HMPREF9130_0367PF13518
879308.HMPREF9130_0127(PF13276)
879308.HMPREF9130_1693PF13518
879308.HMPREF9130_1698PF13518
879308.HMPREF9130_2058PF13518
879308.HMPREF9130_0579PF13518
879308.HMPREF9130_0590PF13518
879308.HMPREF9130_0598PF13518
879308.HMPREF9130_1355(PF16886)
879308.HMPREF9130_1350(PF01992)
879308.HMPREF9130_1351(PF01496)
879308.HMPREF9130_1353(PF01990)
879308.HMPREF9130_0126PF13518
879308.HMPREF9130_0285(PF14512)
879308.HMPREF9130_0133(PF14478)
879308.HMPREF9130_0438PF02037
879308.HMPREF9130_1463PF13518
879308.HMPREF9130_0072PF13518
879308.HMPREF9130_1298PF13518
879308.HMPREF9130_0245PF13518
879308.HMPREF9130_1447PF13518
879308.HMPREF9130_1665PF13518
879308.HMPREF9130_1625PF13518
879308.HMPREF9130_1622PF13518
879308.HMPREF9130_0982PF13518

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================