Effective results for Dialister microaerophilus UPII 345-E (eggnog40)

Summary

Number of putative secreted proteins: 15
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 15 proteins (4 high, 11 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
910314.HMPREF9220_0449(PF09991)ER
910314.HMPREF9220_0545(PF13507)(mitochondrial)
910314.HMPREF9220_0014(PF02127)
910314.HMPREF9220_0641PF13475
910314.HMPREF9220_0181(PF02873)
910314.HMPREF9220_0180PF01745
910314.HMPREF9220_0114(PF13507)
910314.HMPREF9220_0115(PF13507)
910314.HMPREF9220_0640PF13475
910314.HMPREF9220_1305(PF02127)
910314.HMPREF9220_0743(PF00940)
910314.HMPREF9220_0103(PF02873)
910314.HMPREF9220_0555(PF09991)
910314.HMPREF9220_0541(PF02127)
910314.HMPREF9220_1111PF13475

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================