Effective results for Anaerolinea thermophila UNI-1 (eggnog40)

Summary

Number of putative secreted proteins: 115
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 115 proteins (22 high, 93 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
926569.ANT_09150PF13492 (PF13185)ER
926569.ANT_03450PF13492 (PF13185)ER
926569.ANT_00770PF07677 (PF07678)ER
926569.ANT_06600PF13492 (PF13185)ER
926569.ANT_14130PF16158ER
926569.ANT_03190(PF01609)(mitochondrial)
926569.ANT_27990PF13492mitochondrial
926569.ANT_26860PF13886ER
926569.ANT_00060(PF13185)ER
926569.ANT_26070(PF01609)(mitochondrial)
926569.ANT_09820(PF13185)(ER); (mitochondrial)
926569.ANT_05640(PF01609)(mitochondrial)
926569.ANT_22280(PF01609)(mitochondrial)
926569.ANT_00940PF16158ER
926569.ANT_13630(PF01609)(mitochondrial)
926569.ANT_26600(PF01609)(mitochondrial)
926569.ANT_13620(PF01609)(mitochondrial)
926569.ANT_09170(PF13185)ER
926569.ANT_23040PF16158ER
926569.ANT_13920(PF01609)(mitochondrial)
926569.ANT_06250(PF01930)ER
926569.ANT_13930(PF01609)(mitochondrial)
926569.ANT_08580(PF13185)ER
926569.ANT_09160(PF01609)(mitochondrial)
926569.ANT_20120(PF01609)(mitochondrial)
926569.ANT_17170(PF01609)(mitochondrial)
926569.ANT_07570PF16158ER
926569.ANT_15800(PF01609)(mitochondrial)
926569.ANT_19210(PF01609)(mitochondrial)
926569.ANT_11250PF13492ER
926569.ANT_01740(PF16889)ER
926569.ANT_13090(PF01609)(mitochondrial)
926569.ANT_28100(PF01609)(mitochondrial)
926569.ANT_04130(PF13185)ER
926569.ANT_29990(PF01609)(mitochondrial)
926569.ANT_28340(PF01609)(mitochondrial)
926569.ANT_22190PF16158ER
926569.ANT_11230(PF01609)(mitochondrial)
926569.ANT_11160(PF01609)(mitochondrial)
926569.ANT_10360(PF01609)(mitochondrial)
926569.ANT_11830(PF13185)(mitochondrial)
926569.ANT_07940(PF01609)(mitochondrial)
926569.ANT_01530PF16158ER
926569.ANT_18130(PF01609)(mitochondrial)
926569.ANT_13520(PF01555)(mitochondrial)
926569.ANT_27320(PF01609)(mitochondrial)
926569.ANT_27310(PF02171)(mitochondrial); mitochondrial
926569.ANT_08900PF13492ER; (ER)
926569.ANT_15080PF16158ER
926569.ANT_27450PF13492 (PF13185)
926569.ANT_29040(PF03050)(mitochondrial)
926569.ANT_31570(PF13185)(mitochondrial)
926569.ANT_01020(PF03050)(mitochondrial)
926569.ANT_31210PF13492 (PF13185)
926569.ANT_06680(PF03050)(mitochondrial)
926569.ANT_31520(PF03050)(mitochondrial)
926569.ANT_23290(PF03050)(mitochondrial)
926569.ANT_30310PF13492(ER)
926569.ANT_12290(PF03050)(mitochondrial)
926569.ANT_24720PF13492 (PF13185)
926569.ANT_11810(PF13185)(mitochondrial)
926569.ANT_25860PF03465(ER)
926569.ANT_26520(PF03050)(mitochondrial)
926569.ANT_22680(PF03050)(mitochondrial)
926569.ANT_02280(PF03050)(mitochondrial)
926569.ANT_03620(PF13185)(mitochondrial)
926569.ANT_16450(PF03050)(mitochondrial)
926569.ANT_11210(PF02971) (PF07837)
926569.ANT_15660(PF03050)(mitochondrial)
926569.ANT_03830(PF03050)(mitochondrial)
926569.ANT_13540(PF03050)(mitochondrial)
926569.ANT_13300(PF13185)
926569.ANT_12240(PF01930)
926569.ANT_10850(PF13185)
926569.ANT_23160(PF04423)
926569.ANT_02070(PF13185)
926569.ANT_19600(PF01555)
926569.ANT_09830(PF13185)
926569.ANT_24620(PF16889)
926569.ANT_12420(PF08271)not used
926569.ANT_31200(PF13185)
926569.ANT_00030(PF01555)
926569.ANT_15770(PF13185)
926569.ANT_23460(PF00091)
926569.ANT_25700(PF13185)
926569.ANT_30330(PF14938)
926569.ANT_08590(PF01609)
926569.ANT_06880(PF13185)
926569.ANT_28870(PF01555)
926569.ANT_09350(PF01609)
926569.ANT_17380(PF00091)
926569.ANT_28390(PF01930)
926569.ANT_03040(PF01555)
926569.ANT_01570(PF01609)
926569.ANT_28000(PF13185)
926569.ANT_17370(PF00091)
926569.ANT_16280(PF13185)
926569.ANT_04470(PF16485)
926569.ANT_26190(PF03016)
926569.ANT_09250PF13492
926569.ANT_11800(PF13185)
926569.ANT_30200(PF13415)
926569.ANT_04840(PF01555)
926569.ANT_15690PF16158
926569.ANT_27800(PF01609)
926569.ANT_27330(PF01555)
926569.ANT_00430(PF01555)
926569.ANT_11820(PF13185)
926569.ANT_12480(PF13185)
926569.ANT_13850(PF14938)
926569.ANT_11780(PF13185)
926569.ANT_07140(PF01609)
926569.ANT_23810(PF01555)
926569.ANT_01290(PF01555)
926569.ANT_21230(PF04098)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================