Genomes encoding eukaryotic-like proteins
PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase
Copy number in non-pathogens:
Mean=1.14 Stddev=0.64
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Burkholderia cepacia | s | 4 | 4 |
| Nocardia mikamii NBRC 108933 | s | 6 | 5 |
| Nocardia vaccinii NBRC 15922 | s | 6 | 5 |
| Nocardia higoensis NBRC 100133 | s | 7 | 6 |
| Rhodococcus jostii NBRC 16295 | s | 7 | 6 |
| Pseudomonas sp. GM48 | s | 4 | 4 |
| Amycolatopsis orientalis DSM 46075 | s | 6 | 5 |
| Amycolatopsis benzoatilytica AK 16/65 | s | 4 | 4 |
| Burkholderia cepacia ATCC 25416 | s | 4 | 4 |
| Sphingomonas wittichii DP58 | s | 6 | 5 |
| Gordonia terrae | s | 6 | 5 |
| Amycolatopsis jejuensis | s | 7 | 6 |
| Pseudomonas putida | s | 4 | 4 |
| Burkholderia vietnamiensis | s | 4 | 4 |
| Burkholderia cenocepacia | s | 4 | 4 |
| Burkholderia cepacia | s | 4 | 4 |
| Burkholderia cepacia | s | 4 | 4 |
| Burkholderia cepacia | s | 4 | 4 |
| Pseudomonas putida | s | 4 | 4 |
| Mycobacterium wolinskyi | s | 4 | 4 |
| Burkholderia cepacia ATCC 25416 | s | 4 | 4 |
| Mycobacterium florentinum | s | 4 | 4 |
| Sinorhizobium saheli | s | 4 | 4 |
| Stenotrophomonas rhizophila | s | 4 | 4 |
| Vibrio harveyi | s | 4 | 4 |
| Pseudomonas putida | s | 4 | 4 |
| Gordonia terrae | s | 6 | 5 |
| Burkholderia cepacia | s | 4 | 4 |
| Pseudomonas putida | s | 4 | 4 |
| Pseudomonas putida | s | 4 | 4 |
*p=pathogen;s=symbiont
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