Genomes encoding eukaryotic-like proteins

PF01678 Diaminopimelate epimerase

Copy number in non-pathogens:
Mean=0.97 Stddev=0.41

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Pseudomonas fluorescens NZI7 s 4 3
Pseudomonas azotoformans NBRC 12693 s 4 3
Pseudomonas fluorescens SBW25 s 4 3
Klebsiella variicola s 4 3
Escherichia coli s 4 3
Bacteroides vulgatus s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas sp. GM102 s 4 3
Pseudomonas sp. GM16 s 4 3
Pseudomonas sp. GM17 s 4 3
Pseudomonas sp. GM18 s 4 3
Pseudomonas sp. GM24 s 4 3
Pseudomonas sp. GM41(2012) s 4 3
Pseudomonas sp. GM49 s 4 3
Pseudomonas sp. GM50 s 4 3
Pseudomonas sp. GM60 s 4 3
Pseudomonas sp. GM67 s 4 3
Pseudomonas sp. GM78 s 4 3
Pseudomonas sp. GM79 s 4 3
Pseudomonas sp. GM80 s 4 3
Pseudomonas fluorescens LMG 5329 s 4 3
Pseudomonas fluorescens BBc6R8 s 4 3
Pseudomonas chlororaphis YL-1 s 4 3
Mesorhizobium sp. LNJC395A00 s 4 3
Pseudomonas chlororaphis subsp. aurantiaca PB-St2 s 4 3
Pseudomonas chlororaphis subsp. aureofaciens 30-84 s 4 3
Pseudomonas fluorescens Q2-87 s 4 3
Rhizobium mesoamericanum STM6155 s 4 3
Rhizobium sullae WSM1592 s 4 3
Pseudomonas tolaasii 6264 s 4 3
Pseudomonas sp. Ag1 s 4 3
Pseudomonas chlororaphis subsp. chlororaphis GP72 s 4 3
Pseudomonas tolaasii PMS117 s 4 3
Pseudomonas fluorescens NZ052 s 4 3
Pseudomonas fluorescens NZ007 s 4 3
Pseudomonas fuscovaginae UPB0736 s 4 3
Pseudomonas gingeri NCPPB 3146 s 4 3
Pseudomonas fuscovaginae CB98818 s 4 3
Ensifer sp. WSM1721 s 4 3
Pseudomonas protegens CHA0 s 4 3
Pseudomonas protegens Pf-5 s 4 3
Pseudomonas fluorescens F113 s 4 3
Pseudomonas fluorescens A506 s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas brassicacearum s 4 3
Pseudomonas sp. RIT357 s 4 3
Pseudomonas simiae s 4 3
Pseudomonas sp. WCS374 s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas chlororaphis HT66 s 4 3
Pseudomonas chlororaphis subsp. aurantiaca s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas sp. NFR02 s 4 3
Pseudomonas sp. NFPP16 s 4 3
Pseudomonas sp. NFPP14 s 4 3
Pseudomonas sp. NFIX51 s 4 3
Pseudomonas sp. NFPP02 s 4 3
Pseudomonas sp. NFACC04-2 s 4 3
Pseudomonas sp. NFPP09 s 4 3
Pseudomonas brassicacearum s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas simiae s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas veronii s 4 3
Pseudomonas sp. MRSN12121 s 4 3
Pseudomonas veronii s 4 3
Pseudomonas lini s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens PICF7 s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas chlororaphis subsp. piscium s 4 3
Pseudomonas lini s 4 3
Pseudomonas syringae s 4 3
Pseudomonas chlororaphis subsp. piscium s 4 3
Pseudomonas brassicacearum s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas brassicacearum s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas brassicacearum s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas koreensis s 4 3
Pseudomonas lini s 4 3
[Clostridium] stercorarium subsp. leptospartum DSM 9219 s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas simiae s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas simiae s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas synxantha s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas sp. NFACC16-2 s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas veronii s 4 3
Pseudomonas chlororaphis s 4 3
Pseudomonas fluorescens s 4 3
Pseudomonas koreensis s 4 3

*p=pathogen;s=symbiont