Metamenu

Genomes encoding eukaryotic-like proteins

PF06250 Protein of unknown function (DUF1016)

Copy number in non-pathogens:
Mean=0.25 Stddev=0.74

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 6 5
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 5 4
Bacteroides barnesiae DSM 18169 = JCM 13652 s 5 4
Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 s 5 4
Ralstonia solanacearum CMR15 s 5 4
Bacteroides fragilis 638R s 5 4
Flavobacterium branchiophilum FL-15 s 7 6
Bacteroides xylanisolvens SD CC 1b s 6 5
Bacteroides xylanisolvens SD CC 2a s 6 5
Roseburia faecis s 5 4
Roseburia inulinivorans s 5 4
Bacteroides vulgatus s 5 4
[Clostridium] clostridioforme s 5 4
Bacteroides thetaiotaomicron s 5 4
Bacteroides ovatus s 5 4
Bacteroides thetaiotaomicron s 6 5
Parabacteroides distasonis s 6 5
[Eubacterium] rectale s 5 4
Bacteroides intestinalis DSM 17393 s 5 4
Bacteroides dorei DSM 17855 s 7 6
Prevotella buccalis ATCC 35310 s 5 4
Bacteroides xylanisolvens SD CC 1b s 6 5
Bacteroides xylanisolvens SD CC 2a s 6 5
Bacteroides ovatus SD CMC 3f s 10 8
Parabacteroides johnsonii DSM 18315 s 7 6
Prevotella copri DSM 18205 s 10 8
Roseburia intestinalis L1-82 s 5 4
Bacteroides sp. 3_1_13 s 7 6
Bacteroides caccae ATCC 43185 s 6 5
Bacteroides ovatus ATCC 8483 s 5 4
Oribacterium parvum ACB8 s 5 4
Capnocytophaga sp. CM59 s 6 5
Lachnospiraceae bacterium 28-4 s 7 6
Lachnospiraceae bacterium M18-1 s 6 5
Eubacterium plexicaudatum ASF492 s 15 12
Clostridium sp. ASF502 s 7 6
Leptospira alstonii serovar Sichuan str. 79601 s 5 4
Calothrix sp. PCC 7103 s 9 7
Opitutaceae bacterium TAV1 s 7 6
Bacteroides fragilis str. 2-F-2 #4 s 5 4
Bacteroides fragilis str. 3998 T(B) 4 s 5 4
Bacteroides fragilis str. S24L15 s 7 6
Bacteroides fragilis str. S24L26 s 7 6
Bacteroides fragilis str. S24L34 s 7 6
Bacteroides fragilis str. 3998T(B)3 s 6 5
Rickettsia sibirica 246 p 6 5
Leptospira santarosai str. HAI134 s 5 4
Leptospira noguchii str. 2006001870 s 5 4
Leptospira santarosai str. HAI1380 s 6 5
Leptospira alstonii serovar Pingchang str. 80-412 s 5 4
Leptospira santarosai str. HAI821 s 5 4
Capnocytophaga sp. oral taxon 326 str. F0382 s 5 4
Capnocytophaga sp. oral taxon 863 str. F0517 s 5 4
Catonella morbi ATCC 51271 s 5 4
Bacteroides cellulosilyticus WH2 s 7 6
Chryseobacterium gregarium DSM 19109 s 7 6
Parabacteroides gordonii DSM 23371 s 7 6
Bacteroides barnesiae DSM 18169 = JCM 13652 s 7 6
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 6 5
Bacteroides fragilis 3_1_12 s 6 5
Bacteroides sp. 1_1_6 s 7 6
Bacteroides sp. 4_3_47FAA s 11 9
Bacteroides sp. D1 s 9 7
Bacteroides dorei 5_1_36/D4 s 6 5
Bacteroides sp. 2_1_22 s 9 7
Bacteroides sp. 2_1_33B s 7 6
Bacteroides sp. 3_1_33FAA s 7 6
Bacteroides sp. 3_1_40A s 7 6
Bacteroides sp. D22 s 5 4
Bacteroides sp. 1_1_30 s 10 8
Bacteroides oleiciplenus YIT 12058 s 7 6
Oribacterium parvum ACB1 s 5 4
Bacteroides caccae CL03T12C61 s 10 8
Bacteroides cellulosilyticus CL02T12C19 s 6 5
Bacteroides dorei CL02T00C15 s 6 5
Bacteroides dorei CL02T12C06 s 6 5
Bacteroides dorei CL03T12C01 s 9 7
Bacteroides nordii CL02T12C05 s 6 5
Bacteroides ovatus CL02T12C04 s 10 8
Bacteroides ovatus CL03T12C18 s 5 4
Bacteroides salyersiae CL02T12C01 s 5 4
Parabacteroides goldsteinii CL02T12C30 s 6 5
Bacteroides fragilis HMW 610 s 5 4
Bacteroides fragilis HMW 616 s 10 8
Arthrobacter crystallopoietes BAB-32 s 5 4
Haemophilus parasuis D74 s 5 4
Haemophilus parasuis SW114 s 6 5
Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 s 5 4
Elizabethkingia anophelis NUHP1 s 6 5
Elizabethkingia anophelis NUHP3 s 6 5
Legionella drancourtii LLAP12 s 6 5
Rickettsia sibirica subsp. mongolitimonae HA-91 s 5 4
Rickettsia conorii subsp. caspia A-167 s 5 4
Rickettsia sibirica subsp. sibirica BJ-90 p 6 5
Sphingobacterium paucimobilis HER1398 s 5 4
Hallella seregens ATCC 51272 s 5 4
Capnocytophaga granulosa ATCC 51502 s 10 8
[Clostridium] clostridioforme 90A6 s 6 5
[Clostridium] clostridioforme 90B1 s 6 5
[Clostridium] clostridioforme 90A3 s 6 5
[Clostridium] clostridioforme CM201 s 5 4
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 7 6
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 6 5
Bacteroides stercoris CC31F s 6 5
Pedobacter borealis DSM 19626 s 6 5
Rickettsia slovaca 13-B p 5 4
Rickettsia rickettsii str. 'Sheila Smith' p 7 6
Rickettsia rickettsii str. Iowa p 7 6
Bacteroides vulgatus ATCC 8482 s 5 4
[Haemophilus] parasuis p 5 4
Prevotella brevis ATCC 19188 s 6 5
Ruminococcus sp. HUN007 s 9 7
Haemophilus parasuis HPS11 s 5 4
Haemophilus parasuis HPS10 s 5 4
Barnesiella viscericola DSM 18177 s 5 4
Selenomonas ruminantium AB3002 s 5 4
Bacteroides fragilis s 6 5
Bacteroides thetaiotaomicron s 6 5
Leptospira alstonii s 5 4
Leptospira weilii s 5 4
Bacteroides fragilis s 6 5
Bacteroides fragilis s 6 5
Bacteroides fragilis s 6 5
Bacteroides fragilis s 5 4
Acidovorax temperans s 5 4
Rickettsia raoultii s 5 4
Parabacteroides sp. HGS0025 s 7 6
Parabacteroides gordonii MS-1 s 7 6
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 6 5
Bacteroides fragilis s 5 4
Burkholderia ubonensis s 5 4
Fluoribacter bozemanae s 5 4
Bacteroides dorei CL03T12C01 s 9 7
Chryseobacterium sp. MOF25P s 5 4
Chryseobacterium sp. BGARF1 s 5 4
Bacteroides ovatus s 5 4
Bacteroides thetaiotaomicron s 5 4
Bacteroides caecimuris s 7 6
Bacteroides ovatus s 7 6
Bacteroides vulgatus s 5 4
[Haemophilus] parasuis p 5 4
Elizabethkingia meningoseptica s 5 4
Fluoribacter bozemanae s 5 4
Bacteroides thetaiotaomicron s 6 5
Flavobacterium columnare s 5 4
Opitutaceae bacterium TSB47 s 5 4
Bacteroides vulgatus s 5 4
Burkholderia cenocepacia s 5 4
Bacteroides caecimuris s 7 6
Legionella longbeachae s 5 4
[Clostridium] clostridioforme s 5 4
[Clostridium] clostridioforme s 5 4
Elizabethkingia meningoseptica s 6 5
Bacteroides fragilis s 6 5
Bacteroides ovatus s 5 4
Eisenbergiella tayi s 5 4
Eisenbergiella tayi s 6 5
Eisenbergiella tayi s 6 5
Elizabethkingia meningoseptica s 5 4
Elizabethkingia meningoseptica s 5 4
[Clostridium] clostridioforme s 5 4
Bacteroides thetaiotaomicron s 7 6
Flavobacterium columnare s 5 4
Rickettsia rickettsii s 7 6
Rickettsia rickettsii s 7 6
Flavobacterium columnare s 5 4
Bacteroides dorei s 5 4
Parabacteroides distasonis s 6 5
Bacteroides dorei s 6 5
[Haemophilus] parasuis p 5 4
Bacteroides thetaiotaomicron VPI-5482 s 5 4

*p=pathogen;s=symbiont