Metamenu

Genomes encoding eukaryotic-like proteins

PF12399 Branched-chain amino acid ATP-binding cassette transporter

Copy number in non-pathogens:
Mean=3.10 Stddev=4.58

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bordetella bronchiseptica s 4 24
Bradyrhizobium diazoefficiens s 4 22
Rhodopseudomonas sp. B29 s 5 27
Achromobacter piechaudii NBRC 102461 s 4 26
Bradyrhizobium japonicum USDA 6 s 5 30
Bordetella bronchiseptica RB50 s 4 23
Bradyrhizobium sp. STM 3843 s 4 26
Bradyrhizobium sp. STM 3809 s 4 23
Achromobacter xylosoxidans s 5 27
Bradyrhizobium sp. ORS 278 s 4 23
Achromobacter xylosoxidans NH44784-1996 s 4 26
Methylobacterium nodulans ORS 2060 s 4 24
Achromobacter piechaudii ATCC 43553 s 4 25
Methylobacterium sp. 4-46 s 4 23
Variovorax sp. CF313 s 4 25
Acidovorax sp. CF316 s 4 24
Bradyrhizobium sp. YR681 s 4 26
Bradyrhizobium sp. WSM2793 s 4 26
Bradyrhizobium elkanii USDA 76 s 5 30
Bradyrhizobium sp. WSM471 s 4 23
Bradyrhizobium sp. WSM1253 s 4 22
Bordetella pseudohinzii s 4 26
Bradyrhizobium sp. WSM3983 s 4 26
Bradyrhizobium elkanii USDA 3259 s 6 31
Bradyrhizobium japonicum USDA 38 s 6 34
Bradyrhizobium sp. Tv2a-2 s 4 25
Bradyrhizobium sp. Ai1a-2 s 6 31
Bradyrhizobium japonicum USDA 124 s 5 28
Bradyrhizobium japonicum USDA 6 s 5 30
Bradyrhizobium japonicum USDA 122 s 5 27
Bradyrhizobium sp. WSM1743 s 4 23
Bradyrhizobium sp. ARR65 s 4 26
Bradyrhizobium japonicum USDA 4 s 5 28
Bradyrhizobium sp. Ec3.3 s 5 27
Bradyrhizobium elkanii WSM1741 s 5 28
Bradyrhizobium sp. Cp5.3 s 4 26
Bradyrhizobium sp. WSM4349 s 4 22
Bradyrhizobium japonicum USDA 123 s 5 29
Bradyrhizobium elkanii USDA 3254 s 5 30
Bradyrhizobium elkanii WSM2783 s 7 38
Bradyrhizobium japonicum USDA 135 s 4 26
Bradyrhizobium sp. USDA 3384 s 6 35
Bradyrhizobium sp. th.b2 s 5 28
Achromobacter xylosoxidans C54 s 4 23
Afipia clevelandensis ATCC 49720 s 4 26
Bradyrhizobium sp. CCGE-LA001 s 5 27
Herbaspirillum frisingense GSF30 s 4 23
Achromobacter insuavis AXX-A s 4 24
Bradyrhizobium elkanii USDA 94 s 5 29
Afipia broomeae ATCC 49717 s 6 31
Bradyrhizobium sp. WSM1417 s 4 26
Achromobacter xylosoxidans X02736 s 5 28
Bradyrhizobium sp. BTAi1 s 4 24
Verminephrobacter eiseniae EF01-2 s 5 30
Bordetella bronchiseptica B20-10725633 s 4 24
Bordetella bronchiseptica D989 s 4 24
Bordetella bronchiseptica D993 s 4 23
Bordetella bronchiseptica E010 s 4 23
Bordetella bronchiseptica E012 s 4 23
Bordetella bronchiseptica E013 s 4 23
Bordetella bronchiseptica E014 s 4 24
Azospirillum brasilense s 4 25
Bradyrhizobium japonicum s 5 30
Bradyrhizobium japonicum SEMIA 5079 s 5 29
Bradyrhizobium diazoefficiens SEMIA 5080 s 5 27
Bordetella bronchiseptica s 4 22
Afipia sp. NBIMC_P1-C1 s 5 28
Afipia sp. NBIMC_P1-C2 s 5 28
Afipia sp. NBIMC_P1-C3 s 5 28
Afipia sp. OHSU_II-uncloned s 5 28
Bradyrhizobium sp. OHSU_III s 5 30
Afipia sp. OHSU_I-C6 s 5 28
Afipia sp. OHSU_I-C4 s 5 28
Afipia sp. OHSU_I-uncloned s 5 28
Afipia sp. OHSU_II-C2 s 5 28
Afipia sp. OHSU_II-C1 s 5 28
Azospirillum lipoferum s 5 30
Achromobacter xylosoxidans C54 s 4 26
Bradyrhizobium japonicum s 6 33
Achromobacter xylosoxidans s 5 28
Achromobacter xylosoxidans s 4 24
Bradyrhizobium elkanii s 5 30
Bradyrhizobium japonicum s 5 30
Bradyrhizobium diazoefficiens USDA 110 s 5 28
Bradyrhizobium japonicum s 5 27
Achromobacter xylosoxidans s 4 25
Achromobacter xylosoxidans s 4 24
Achromobacter xylosoxidans s 4 24
Achromobacter xylosoxidans s 4 22
Achromobacter xylosoxidans s 4 23
Achromobacter xylosoxidans s 4 24
Achromobacter xylosoxidans s 4 24
Achromobacter xylosoxidans s 5 27
Achromobacter xylosoxidans s 4 24
Bordetella sp. H567 s 4 22
Achromobacter xylosoxidans s 5 27
Achromobacter xylosoxidans s 4 25
Achromobacter ruhlandii s 4 23
Achromobacter ruhlandii s 4 24
Achromobacter ruhlandii s 4 23
Achromobacter ruhlandii s 4 25
Achromobacter denitrificans s 4 24
Bradyrhizobium diazoefficiens s 5 27
Achromobacter xylosoxidans s 4 25
Xylophilus ampelinus s 4 23
Bordetella pseudohinzii s 4 26
Bordetella pseudohinzii s 4 26
Achromobacter xylosoxidans s 4 24
Bradyrhizobium liaoningense s 5 30
Achromobacter sp. AR476-2 s 7 39
Tardiphaga robiniae s 6 33
Achromobacter xylosoxidans s 4 25
Achromobacter xylosoxidans s 4 25
Bradyrhizobium elkanii s 5 29
Bradyrhizobium elkanii s 5 29
Achromobacter xylosoxidans s 4 25
Achromobacter xylosoxidans s 4 24
Achromobacter xylosoxidans s 4 24
Bradyrhizobium icense s 6 32
Bordetella bronchialis s 5 29
Bordetella flabilis s 5 28
Bordetella bronchialis s 5 29
Bordetella bronchiseptica s 4 22
Bordetella pseudohinzii s 4 26
Achromobacter ruhlandii s 4 24
Achromobacter xylosoxidans s 5 28
Achromobacter xylosoxidans s 4 24
Achromobacter xylosoxidans s 4 25
Bradyrhizobium japonicum s 6 31
Bradyrhizobium elkanii s 5 29
Achromobacter xylosoxidans s 7 37
Achromobacter denitrificans s 7 39
Achromobacter xylosoxidans s 7 39
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium japonicum s 6 31
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Bradyrhizobium canariense s 4 22
Achromobacter xylosoxidans s 7 39
Achromobacter denitrificans s 7 39
Bradyrhizobium diazoefficiens USDA 110 s 5 28

*p=pathogen;s=symbiont