Metamenu

Genomes encoding eukaryotic-like proteins

PF13087 AAA domain

Copy number in non-pathogens:
Mean=0.59 Stddev=0.83

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Nocardia inohanensis NBRC 100128 s 4 4
Nocardia higoensis NBRC 100133 s 4 4
Nocardia thailandica NBRC 100428 s 4 4
Bacteroides fragilis NCTC 9343 s 5 5
Frankia alni ACN14a s 5 5
Bacteroides fragilis 638R s 5 5
Bacteroides xylanisolvens SD CC 1b s 4 4
Bacteroides xylanisolvens SD CC 2a s 4 4
Bacteroides fragilis s 4 4
Bacteroides thetaiotaomicron s 4 4
Ralstonia solanacearum s 4 4
Bacteroides thetaiotaomicron s 5 5
Bacteroides fragilis s 4 4
Bacteroides vulgatus s 4 4
Bacteroides ovatus s 4 4
Bacteroides dorei DSM 17855 s 4 4
Bacteroides xylanisolvens SD CC 1b s 4 4
Bacteroides ovatus SD CMC 3f s 5 5
Bacteroides finegoldii DSM 17565 s 5 5
Fusobacterium periodonticum ATCC 33693 s 4 4
Bacteroides sp. 3_1_13 s 4 4
Bacteroides ovatus ATCC 8483 s 4 4
Pseudomonas sp. HPB0071 s 6 6
Amycolatopsis benzoatilytica AK 16/65 s 4 4
Bacteroides fragilis str. J-143-4 s 5 5
Bacteroides fragilis str. I1345 s 4 4
Bacteroides fragilis str. J38-1 s 4 4
Bacteroides fragilis str. A7 (UDC12-2) s 5 5
Bacteroides fragilis str. Ds-233 s 4 4
Bacteroides fragilis str. DS-71 s 5 5
Bacteroides fragilis str. DS-166 s 4 4
Bacteroides fragilis str. 20793-3 s 4 4
Bacteroides fragilis str. 2-F-2 #4 s 4 4
Bacteroides fragilis str. S13 L11 s 4 4
Bacteroides fragilis str. 1007-1-F #7 s 4 4
Bacteroides fragilis str. 1007-1-F #8 s 4 4
Bacteroides fragilis str. 1007-1-F #9 s 4 4
Bacteroides fragilis str. 1009-4-F #7 s 5 5
Bacteroides fragilis str. 1007-1-F #10 s 4 4
Bacteroides fragilis str. 1009-4-F #10 s 5 5
Bacteroides fragilis str. 3397 T14 s 4 4
Bacteroides fragilis str. 3719 A10 s 4 4
Bacteroides fragilis str. 3774 T13 s 4 4
Bacteroides fragilis str. 2-F-2 #5 s 4 4
Bacteroides fragilis str. 3783N1-2 s 5 5
Bacteroides fragilis str. 3783N1-6 s 5 5
Bacteroides fragilis str. 3397 N3 s 4 4
Bacteroides fragilis str. 3783N1-8 s 5 5
Bacteroides fragilis str. 3783N2-1 s 4 4
Bacteroides fragilis str. 3998 T(B) 4 s 5 5
Bacteroides fragilis str. 3986 T(B)9 s 5 5
Bacteroides fragilis str. 3976T7 s 4 4
Bacteroides fragilis str. 3986T(B)10 s 5 5
Bacteroides fragilis str. 3976T8 s 4 4
Bacteroides fragilis str. 3986 T(B)13 s 5 5
Bacteroides fragilis str. 3986 N(B)22 s 5 5
Bacteroides fragilis str. S6L3 s 4 4
Bacteroides fragilis str. S6L8 s 4 4
Bacteroides fragilis str. S6R5 s 4 4
Bacteroides fragilis str. S6R6 s 4 4
Bacteroides fragilis str. S24L15 s 5 5
Bacteroides fragilis str. S24L26 s 5 5
Bacteroides fragilis str. S24L34 s 5 5
Bacteroides fragilis str. S36L5 s 4 4
Bacteroides fragilis str. S36L11 s 4 4
Bacteroides fragilis str. S23L24 s 4 4
Bacteroides fragilis str. S38L3 s 5 5
Bacteroides fragilis str. S38L5 s 5 5
Bacteroides fragilis str. 3-F-2 #6 s 4 4
Bacteroides fragilis str. 34-F-2 #13 s 4 4
Bacteroides fragilis str. 1007-1-F #3 s 4 4
Bacteroides fragilis str. 1007-1-F #4 s 4 4
Bacteroides fragilis str. 3725 D9(v) s 4 4
Frankia sp. Cc1.17 s 4 4
Pseudomonas aeruginosa CF77 s 4 4
Bacteroides fragilis str. 3998T(B)3 s 5 5
Bacteroides fragilis str. S36L12 s 4 4
Campylobacter upsaliensis RM3195 s 4 4
Bacteroides sp. 2_2_4 s 4 4
Bacteroides sp. 3_2_5 s 5 5
Bacteroides sp. 9_1_42FAA s 4 4
Bacteroides sp. D1 s 4 4
Bacteroides sp. D2 s 4 4
Fusobacterium periodonticum 1_1_41FAA s 4 4
Bacteroides sp. 2_1_16 s 4 4
Bacteroides sp. 2_1_22 s 4 4
Bacteroides sp. 3_1_23 s 4 4
Bacteroides ovatus 3_8_47FAA s 4 4
Bacteroides sp. D22 s 5 5
Bacteroides sp. 1_1_30 s 4 4
Bacteroides caccae CL03T12C61 s 4 4
Bacteroides dorei CL02T00C15 s 4 4
Bacteroides dorei CL02T12C06 s 4 4
Bacteroides dorei CL03T12C01 s 4 4
Bacteroides fragilis CL03T00C08 s 4 4
Bacteroides fragilis CL03T12C07 s 4 4
Bacteroides fragilis CL07T00C01 s 4 4
Bacteroides fragilis CL07T12C05 s 4 4
Bacteroides ovatus CL03T12C18 s 4 4
Bacteroides vulgatus CL09T03C04 s 5 5
Bacteroides xylanisolvens CL03T12C04 s 5 5
Bacteroides fragilis HMW 615 s 4 4
Fluoribacter dumoffii Tex-KL s 4 4
Bacteroides sp. HPS0048 s 4 4
Afipia broomeae ATCC 49717 s 4 4
Fusobacterium nucleatum CTI-6 s 4 4
Stigmatella aurantiaca DW4/3-1 s 5 5
Actinoplanes subtropicus s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 4 4
Mycoplasma pirum MPI25960 s 4 4
Escherichia coli s 4 4
Selenomonas ruminantium AB3002 s 4 4
Bacteroides fragilis s 5 5
Bacteroides fragilis s 4 4
Vibrio parahaemolyticus s 4 4
Vibrio parahaemolyticus s 4 4
Pseudomonas aeruginosa s 4 4
Pseudomonas aeruginosa s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 5 5
Bacteroides fragilis s 5 5
Spiroplasma kunkelii CR2-3x s 4 4
Burkholderia cepacia s 4 4
Bacteroides ovatus s 4 4
Bacteroides dorei CL03T12C01 s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 4 4
Bacteroides ovatus s 4 4
Bacteroides thetaiotaomicron s 4 4
Bacteroides fragilis s 4 4
Bacteroides fragilis s 5 5
Bacteroides ovatus s 4 4
Rhizobium sp. N324 s 4 4
Pseudomonas aeruginosa s 4 4
Pseudomonas aeruginosa s 4 4
Ralstonia solanacearum s 4 4
Mycobacterium mucogenicum s 4 4
Mycobacterium mucogenicum s 4 4
Bacteroides vulgatus s 4 4
Bacteroides xylanisolvens s 4 4
Bacteroides ovatus s 4 4
Bacteroides ovatus s 4 4
Bacteroides xylanisolvens s 5 5
Bacteroides fragilis s 4 4
Bacteroides ovatus s 4 4
Bacteroides fragilis s 5 5
Bacteroides fragilis s 4 4
Bacteroides thetaiotaomicron s 4 4
Bacteroides xylanisolvens s 4 4
Bacteroides dorei s 4 4
Bacteroides ovatus s 4 4
Bacteroides dorei s 4 4
Pseudomonas aeruginosa s 4 4
Pseudomonas aeruginosa s 4 4
Bacteroides fragilis YCH46 s 4 4

*p=pathogen;s=symbiont