Genomes encoding eukaryotic-like proteins

PF13518 Helix-turn-helix domain

Copy number in non-pathogens:
Mean=0.36 Stddev=0.81

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Moraxella atlantae NBRC 14588 s 4 4
Bifidobacterium longum subsp. longum s 4 4
Lactobacillus fermentum IFO 3956 s 15 13
Lactobacillus reuteri JCM 1112 s 6 6
Lactobacillus rhamnosus GG s 4 4
Solibacillus silvestris StLB046 s 5 5
Lactobacillus casei subsp. casei ATCC 393 s 6 6
Klebsiella pneumoniae s 5 5
Bacillus cereus s 4 4
Klebsiella pneumoniae s 4 4
Burkholderia cenocepacia J2315 s 4 4
Escherichia coli O127:H6 str. E2348/69 s 6 6
Klebsiella pneumoniae s 6 6
Brevibacillus massiliensis s 4 4
Bacillus massilioanorexius AP8 s 5 5
Lactobacillus rhamnosus GG s 4 4
Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO s 4 4
Lactobacillus reuteri ATCC 53608 s 10 9
Mycoplasma mycoides subsp. capri LC str. 95010 s 6 6
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 5 5
Enterobacter cloacae s 4 4
Enterobacter cloacae s 4 4
Enterobacter cloacae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella oxytoca s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Escherichia coli s 4 4
Escherichia coli s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 9 8
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 8 7
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Candidatus Phytoplasma australiense p 5 5
Neisseria lactamica 020-06 s 9 8
Klebsiella pneumoniae s 4 4
Enterobacter kobei s 4 4
Klebsiella pneumoniae s 5 5
Corynebacterium jeikeium K411 s 10 9
Lactobacillus mucosae LM1 s 5 5
Escherichia coli s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Yersinia pestis s 8 7
Escherichia coli s 4 4
Paenibacillus phocaensis s 4 4
Burkholderia multivorans s 4 4
Yersinia pseudotuberculosis s 4 4
Escherichia coli s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Bacillus cereus s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Mycobacterium chimaera s 4 4
Ruminococcus lactaris ATCC 29176 s 4 4
Lactobacillus fermentum ATCC 14931 s 4 4
Lactobacillus antri DSM 16041 s 4 4
Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 s 4 4
Lactobacillus ruminis ATCC 25644 s 4 4
Lactobacillus reuteri SD2112 s 8 7
Lactobacillus reuteri MM4-1A s 6 6
Finegoldia magna ATCC 53516 s 6 6
Pyramidobacter piscolens W5455 s 4 4
Actinomyces odontolyticus F0309 s 4 4
Neisseria mucosa ATCC 25996 s 6 6
Neisseria sicca ATCC 29256 s 4 4
Veillonella dispar ATCC 17748 s 4 4
Peptoniphilus asaccharolyticus DSM 20463 s 6 6
Finegoldia magna SY403409CC001050417 s 4 4
Collinsella sp. 4_8_47FAA s 10 9
Peptoniphilus sp. oral taxon 375 str. F0436 s 4 4
Escherichia coli DEC2C s 6 6
Escherichia coli DEC2D s 6 6
Escherichia coli DEC2E s 6 6
Klebsiella sp. MS 92-3 s 4 4
Escherichia coli MS 145-7 s 4 4
Escherichia coli DEC1E s 11 10
Escherichia coli DEC2B s 5 5
Escherichia coli DEC1D s 5 5
Escherichia coli DEC1C s 6 6
Escherichia coli DEC1A s 6 6
Escherichia coli DEC1B s 8 7
Lactobacillus oris F0423 s 6 6
Paenibacillus larvae subsp. larvae BRL-230010 s 8 7
Burkholderia cenocepacia K56-2Valvano s 4 4
Lactobacillus reuteri 100-23 s 5 5
Collinsella aerofaciens ATCC 25986 s 4 4
Acinetobacter baumannii OIFC111 s 5 5
Neisseria sicca VK64 s 9 8
Enterococcus cecorum DSM 20682 = ATCC 43198 s 4 4
Shigella flexneri 2a str. 2457T s 4 4
Escherichia coli 2362-75 s 6 6
Haemophilus sputorum HK 2154 s 4 4
Escherichia coli P0298942.6 s 5 5
Escherichia coli P0298942.7 s 6 6
Escherichia coli P0298942.9 s 4 4
Escherichia coli KTE101 s 4 4
Escherichia coli KTE134 s 4 4
Escherichia coli P0298942.3 s 5 5
Escherichia coli KTE190 s 4 4
Escherichia coli KTE200 s 4 4
Escherichia coli KTE208 s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPNIH4 s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPNIH6 s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPNIH1 s 5 5
Klebsiella pneumoniae subsp. pneumoniae KPNIH10 s 5 5
Klebsiella pneumoniae subsp. pneumoniae KPNIH11 s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPNIH16 s 4 4
Ruminococcus lactaris CC59_002D s 4 4
Oscillibacter sp. 1-3 s 4 4
Lactobacillus murinus ASF361 s 13 11
Acinetobacter baumannii NIPH 615 s 5 5
Escherichia coli HVH 4 (4-7276109) s 13 11
Escherichia coli HVH 6 (3-8296502) s 5 5
Escherichia coli HVH 143 (4-5674999) s 5 5
Escherichia coli UMEA 3152-1 s 6 6
Leptospira santarosai serovar Szwajizak str. Oregon s 9 8
Klebsiella pneumoniae JHCK1 s 5 5
Burkholderia cenocepacia s 4 4
Lactobacillus fermentum Lf1 s 16 14
Klebsiella michiganensis s 6 6
Klebsiella pneumoniae BIDMC 12C s 5 5
Klebsiella pneumoniae UHKPC07 s 4 4
Klebsiella pneumoniae DMC0799 s 4 4
Klebsiella pneumoniae 500_1420 s 4 4
Klebsiella pneumoniae UHKPC33 s 5 5
Alistipes finegoldii DSM 17242 s 4 4
[Eubacterium] cellulosolvens 6 s 4 4
Allobaculum stercoricanis DSM 13633 s 5 5
Rhizobium leguminosarum bv. viciae WSM1481 s 5 5
Jonquetella anthropi DSM 22815 s 8 7
Microvirga lotononidis s 6 6
Lactobacillus fermentum 3872 s 14 12
Klebsiella pneumoniae subsp. pneumoniae KKBO-4 s 6 6
Klebsiella pneumoniae subsp. pneumoniae KKBO-1 s 6 6
Lactobacillus oris DSM 4864 s 4 4
Lactobacillus harbinensis DSM 16991 s 5 5
Lactobacillus mali KCTC 3596 = DSM 20444 s 4 4
Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 s 8 7
Acinetobacter baumannii 972082 s 4 4
Treponema pedis isoE1186 s 5 5
Acinetobacter baumannii 4749 s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPB-1 s 5 5
Klebsiella pneumoniae subsp. pneumoniae KPB-2 s 5 5
Haemophilus influenzae 3655 s 5 5
Haemophilus influenzae PittAA s 5 5
Haemophilus influenzae 6P18H1 s 5 5
Yersinia pestis CA88-4125 s 6 6
Yersinia pestis Nepal516 s 8 7
Yersinia pestis biovar Orientalis str. India 195 s 6 6
Yersinia pestis biovar Orientalis str. PEXU2 s 8 7
Yersinia pestis Pestoides A s 5 5
Yersinia pestis INS p 8 7
Yersinia pestis biovar Orientalis str. F1991016 s 6 6
Yersinia pestis biovar Antiqua str. E1979001 s 9 8
Yersinia pestis biovar Antiqua str. B42003004 s 9 8
Yersinia pestis biovar Mediaevalis str. K1973002 s 9 8
Yersinia pestis biovar Orientalis str. MG05-1020 s 8 7
Yersinia pestis biovar Antiqua str. UG05-0454 s 8 7
Escherichia coli C262_10 s 4 4
Escherichia coli HM46 s 4 4
Clostridium butyricum 5521 s 4 4
Escherichia albertii TW07627 s 8 7
Bacillus cereus H3081.97 s 5 5
Escherichia coli 93.0624 s 8 7
Leptospira santarosai str. CBC379 s 4 4
Lactobacillus harbinensis DSM 16991 s 4 4
Rothia mucilaginosa M508 s 8 7
Klebsiella sp. 4_1_44FAA s 5 5
Neisseria sp. GT4A_CT1 s 6 6
Bifidobacterium sp. 12_1_47BFAA s 4 4
Lachnospiraceae bacterium 2_1_46FAA s 4 4
Sutterella wadsworthensis 2_1_59BFAA s 5 5
Facklamia ignava CCUG 37419 s 4 4
Klebsiella pneumoniae subsp. pneumoniae WGLW5 s 5 5
Actinobacillus pleuropneumoniae serovar 2 str. 4226 p 4 4
Lactobacillus rhamnosus R0011 s 5 5
Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 s 4 4
Lactobacillus mucosae LM1 s 6 6
Clostridium butyricum E4 str. BoNT E BL5262 s 4 4
Serratia plymuthica PRI-2C s 8 7
Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 s 4 4
Lactobacillus ruminis SPM0211 s 9 8
Paenibacillus vortex V453 s 5 5
Escherichia coli SEPT362 s 4 4
Lactobacillus coryniformis subsp. coryniformis CECT 5711 s 6 6
Aggregatibacter actinomycetemcomitans serotype e str. SC1083 p 4 4
Escherichia coli WV_060327 s 15 13
Klebsiella pneumoniae MGH 67 s 4 4
Klebsiella pneumoniae MGH 69 s 4 4
Klebsiella pneumoniae MGH 71 s 6 6
Klebsiella pneumoniae MGH 79 s 5 5
Klebsiella pneumoniae BWH 45 s 4 4
Klebsiella pneumoniae UCI 56 s 4 4
Klebsiella pneumoniae UCI 62 s 5 5
Klebsiella pneumoniae BIDMC 60 s 5 5
Klebsiella pneumoniae BIDMC 68 s 6 6
Klebsiella pneumoniae CHS 02 s 5 5
Klebsiella pneumoniae CHS 03 s 5 5
Klebsiella pneumoniae CHS 05 s 4 4
Klebsiella pneumoniae CHS 06 s 4 4
Klebsiella pneumoniae CHS 07 s 5 5
Klebsiella pneumoniae CHS 09 s 8 7
Klebsiella pneumoniae CHS 11 s 4 4
Klebsiella pneumoniae CHS 14 s 4 4
Klebsiella pneumoniae CHS 18 s 4 4
Klebsiella pneumoniae CHS 20 s 4 4
Klebsiella pneumoniae CHS 23 s 6 6
Klebsiella pneumoniae CHS 25 s 6 6
Klebsiella pneumoniae CHS 26 s 5 5
Klebsiella pneumoniae CHS 28 s 5 5
Klebsiella pneumoniae CHS 30 s 6 6
Klebsiella pneumoniae CHS 31 s 4 4
Klebsiella pneumoniae CHS 32 s 5 5
Klebsiella pneumoniae CHS 33 s 4 4
Klebsiella pneumoniae CHS 34 s 6 6
Klebsiella pneumoniae CHS 36 s 6 6
Klebsiella pneumoniae CHS 37 s 6 6
Klebsiella pneumoniae CHS 38 s 5 5
Klebsiella pneumoniae CHS 39 s 6 6
Klebsiella pneumoniae CHS 40 s 6 6
Klebsiella pneumoniae CHS 41 s 5 5
Klebsiella pneumoniae CHS 44 s 6 6
Klebsiella pneumoniae CHS 45 s 4 4
Klebsiella pneumoniae CHS 46 s 5 5
Klebsiella pneumoniae CHS 50 s 4 4
Klebsiella pneumoniae CHS 51 s 4 4
Klebsiella pneumoniae CHS 52 s 5 5
Klebsiella pneumoniae CHS 53 s 6 6
Klebsiella pneumoniae CHS 54 s 6 6
Klebsiella pneumoniae CHS 55 s 4 4
Klebsiella pneumoniae CHS 56 s 5 5
Klebsiella pneumoniae CHS 57 s 6 6
Klebsiella pneumoniae CHS 58 s 6 6
Klebsiella pneumoniae CHS 59 s 6 6
Klebsiella pneumoniae CHS 61 s 4 4
Klebsiella pneumoniae CHS 62 s 5 5
Klebsiella pneumoniae CHS 63 s 4 4
Klebsiella pneumoniae CHS 64 s 6 6
Klebsiella pneumoniae CHS 65 s 6 6
Klebsiella pneumoniae CHS 67 s 4 4
Klebsiella pneumoniae CHS 70 s 4 4
Klebsiella pneumoniae CHS 71 s 6 6
Klebsiella pneumoniae CHS 72 s 5 5
Klebsiella pneumoniae CHS 73 s 6 6
Klebsiella pneumoniae CHS 74 s 5 5
Klebsiella pneumoniae CHS 75 s 5 5
Klebsiella pneumoniae CHS 76 s 5 5
Klebsiella pneumoniae CHS 80 s 4 4
Klebsiella pneumoniae MGH 51 s 5 5
Escherichia coli MGH 58 s 4 4
Gemella haemolysans M341 s 8 7
Escherichia coli M718 s 6 6
Escherichia coli TA124 s 10 9
Paenibacillus larvae subsp. larvae DSM 25719 s 18 15
Lactobacillus reuteri DSM 20016 s 6 6
Yersinia pestis Antiqua s 6 6
Yersinia pestis Nepal516 s 6 6
Yersinia pestis Pestoides F s 5 5
Slackia heliotrinireducens DSM 20476 s 5 5
Yersinia pseudotuberculosis PB1/+ s 4 4
Yersinia pestis biovar Microtus str. 91001 s 5 5
Xanthomonas oryzae pv. oryzae PXO99A s 4 4
Lactobacillus reuteri I5007 s 10 9
Mycoplasma hyorhinis HUB-1 s 5 5
Yersinia pestis biovar Medievalis str. Harbin 35 s 6 6
Mycoplasma mycoides subsp. capri str. GM12 s 5 5
Mycoplasma mycoides subsp. capri str. GM12 s 5 5
Yersinia pestis A1122 s 6 6
Klebsiella pneumoniae JM45 s 5 5
Klebsiella pneumoniae CG43 s 4 4
Yersinia pestis D106004 s 6 6
Yersinia pestis D182038 s 6 6
Yersinia pestis Z176003 s 5 5
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 s 5 5
Yersinia pestis KIM10+ s 6 6
Lactobacillus fermentum CECT 5716 s 13 11
Escherichia coli s 4 4
Escherichia coli s 4 4
Corynebacterium jeikeium s 4 4
Paenibacillus larvae subsp. larvae DSM 25430 s 16 14
Klebsiella sp. 10982 s 4 4
Escherichia coli s 4 4
Aggregatibacter actinomycetemcomitans HK1651 p 4 4
Escherichia coli 2-005-03_S3_C2 s 5 5
Acinetobacter baumannii 21072 s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPNIH27 s 8 7
Citrobacter amalonaticus s 4 4
Ruminococcus sp. NK3A76 s 6 6
Peptostreptococcaceae bacterium VA2 s 4 4
[Clostridium] lactatifermentans DSM 14214 s 6 6
Yersinia pestis s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae subsp. pneumoniae KPNIH24 s 6 6
Klebsiella pneumoniae subsp. pneumoniae KPR0928 s 4 4
Escherichia coli s 4 4
Escherichia coli s 5 5
Escherichia coli s 4 4
Escherichia coli s 4 4
Escherichia coli s 4 4
Klebsiella pneumoniae subsp. pneumoniae s 4 4
Klebsiella pneumoniae subsp. pneumoniae s 4 4
Klebsiella pneumoniae subsp. pneumoniae s 4 4
Butyricicoccus desmolans ATCC 43058 s 5 5
Endozoicomonas montiporae s 4 4
Klebsiella pneumoniae s 6 6
Yersinia pseudotuberculosis s 4 4
Candidatus Paracaedibacter acanthamoebae s 4 4
Salmonella enterica s 4 4
Yersinia pestis s 9 8
Bacillus thuringiensis s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Pantoea vagans s 6 6
Yersinia pestis s 5 5
Yersinia pestis A1122 s 6 6
Klebsiella pneumoniae subsp. pneumoniae PittNDM01 s 4 4
Yersinia pestis s 6 6
Yersinia pseudotuberculosis IP 32953 s 4 4
Yersinia pestis Pestoides F s 5 5
Enterobacter hormaechei subsp. oharae s 5 5
Yersinia pseudotuberculosis s 4 4
Yersinia pseudotuberculosis PB1/+ s 4 4
Burkholderia cepacia s 4 4
Yersinia pestis s 5 5
Lactobacillus plantarum s 4 4
Yersinia pestis s 6 6
Yersinia pestis CO92 s 8 7
Yersinia pestis s 6 6
Mycoplasma mycoides subsp. mycoides s 16 14
Yersinia pestis Antiqua s 6 6
Haemophilus parainfluenzae s 5 5
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Klebsiella oxytoca s 9 8
Klebsiella pneumoniae s 6 6
Enterobacter cloacae s 6 6
Klebsiella michiganensis s 5 5
Haemophilus parainfluenzae s 4 4
Haemophilus influenzae s 4 4
Klebsiella pneumoniae subsp. pneumoniae s 8 7
Klebsiella michiganensis s 6 6
Rothia mucilaginosa s 4 4
Klebsiella variicola s 9 8
Klebsiella variicola s 9 8
Haemophilus influenzae s 4 4
Haemophilus influenzae s 4 4
Klebsiella variicola s 4 4
Enterobacter cloacae s 4 4
Serratia marcescens s 4 4
Haemophilus parainfluenzae s 4 4
Haemophilus influenzae s 5 5
Yersinia pestis Pestoides G s 5 5
Yersinia pestis s 8 7
Yersinia pestis s 6 6
Klebsiella pneumoniae s 8 7
Yersinia pestis s 6 6
Lactobacillus plantarum s 4 4
Escherichia coli s 4 4
Klebsiella oxytoca s 4 4
Klebsiella oxytoca s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 9 8
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 8 7
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 8 7
Klebsiella pneumoniae s 8 7
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 8 7
Klebsiella pneumoniae s 9 8
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Escherichia coli s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Serratia marcescens s 4 4
Mycoplasma mycoides subsp. mycoides s 18 15
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter hormaechei subsp. oharae s 4 4
Haemophilus influenzae s 4 4
Haemophilus influenzae s 4 4
Haemophilus influenzae s 4 4
Mycoplasma mycoides subsp. mycoides s 18 15
Citrobacter freundii s 4 4
Citrobacter freundii s 4 4
Enterobacter cloacae s 4 4
Burkholderia cenocepacia s 4 4
Bacillus cereus s 4 4
Bacillus cereus s 4 4
Bacillus cereus s 4 4
Bacillus cereus s 6 6
Bacillus cereus s 5 5
Enterobacter cloacae s 4 4
Escherichia coli s 4 4
Lactobacillus reuteri s 6 6
Lactobacillus plantarum s 5 5
Escherichia coli s 6 6
Klebsiella pneumoniae subsp. pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Lactobacillus fermentum s 4 4
Lactobacillus fermentum s 4 4
Mycoplasma mycoides subsp. mycoides s 8 7
Escherichia coli s 4 4
Klebsiella pneumoniae subsp. pneumoniae s 8 7
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Klebsiella pneumoniae s 5 5
Lactobacillus plantarum s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter sp. GN02600 s 4 4
Kluyvera intermedia s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella oxytoca s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella oxytoca s 6 6
Salmonella enterica subsp. enterica serovar Newport s 4 4
Piscirickettsia salmonis s 4 4
Lactobacillus rhamnosus s 5 5
Lactobacillus rhamnosus s 4 4
Klebsiella pneumoniae s 4 4
Escherichia coli s 6 6
Aggregatibacter actinomycetemcomitans s 5 5
Yersinia pestis s 8 7
Yersinia pestis s 5 5
Lactobacillus reuteri s 9 8
Escherichia coli s 4 4
Klebsiella pneumoniae s 6 6
Spiroplasma turonicum s 4 4
Klebsiella pneumoniae s 9 8
Klebsiella pneumoniae s 5 5
Citrobacter amalonaticus s 5 5
Enterobacter cloacae complex 'Hoffmann cluster IV' s 5 5
Serratia marcescens subsp. marcescens s 4 4
Serratia marcescens subsp. marcescens s 4 4
Yersinia pestis s 8 7
Yersinia pestis s 8 7
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 9 8
Klebsiella pneumoniae s 4 4
Enterobacter cloacae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Enterobacter cloacae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Escherichia coli s 4 4
Klebsiella pneumoniae subsp. pneumoniae s 6 6
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Klebsiella pneumoniae s 4 4
Pseudomonas aeruginosa s 4 4
Pseudomonas aeruginosa s 4 4
Acinetobacter baumannii s 5 5
Acinetobacter pittii s 4 4
Acinetobacter pittii s 5 5
Acinetobacter pittii s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Spiroplasma turonicum s 4 4
Lactobacillus plantarum s 5 5
Enterobacter hormaechei subsp. steigerwaltii s 5 5
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. oharae s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Clostridium botulinum s 4 4
Pseudarthrobacter sulfonivorans s 4 4
Lactobacillus plantarum s 4 4
Escherichia coli s 5 5
Escherichia coli s 4 4
Salmonella enterica subsp. enterica serovar Typhimurium s 4 4
Lactobacillus rhamnosus s 5 5
Aerococcus viridans s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 4 4
Enterobacter hormaechei subsp. steigerwaltii s 5 5
Enterobacter cloacae subsp. cloacae s 4 4
Paenibacillus glucanolyticus s 4 4
Klebsiella pneumoniae s 4 4
Mycoplasma mycoides subsp. mycoides s 18 15
Escherichia coli s 4 4
Escherichia coli s 5 5
Klebsiella pneumoniae s 5 5
Mycoplasma mycoides subsp. mycoides s 14 12
Mycoplasma mycoides subsp. mycoides s 8 7
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Enterobacter hormaechei s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella michiganensis s 5 5
Escherichia coli s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 6 6
Lactobacillus plantarum s 6 6
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 5 5
Haemophilus influenzae s 4 4
Neisseria sicca s 11 10
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae subsp. pneumoniae s 4 4
Burkholderia cenocepacia s 6 6
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 4 4
Burkholderia cenocepacia s 5 5
Burkholderia cenocepacia s 6 6
Burkholderia cenocepacia s 5 5
Burkholderia cenocepacia s 6 6
Burkholderia cenocepacia s 4 4
Klebsiella pneumoniae s 5 5
Lactobacillus reuteri s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Lactobacillus rhamnosus s 5 5
Yersinia pestis s 6 6
Bacillus cereus s 5 5
Aggregatibacter actinomycetemcomitans s 4 4
Lactobacillus reuteri s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Anaerolineaceae bacterium oral taxon 439 s 4 4
Klebsiella quasipneumoniae s 4 4
Bacillus cereus s 8 7
Lactobacillus fermentum s 5 5
Escherichia coli s 4 4
Escherichia coli s 4 4
Klebsiella pneumoniae s 4 4
Lactobacillus plantarum s 5 5
Lactobacillus casei s 4 4
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus fermentum s 5 5
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 4 4
Lactobacillus plantarum s 5 5
Lactobacillus plantarum s 6 6
Lactobacillus reuteri s 4 4
Lactobacillus reuteri s 5 5
Lactobacillus reuteri s 4 4
Lactobacillus reuteri s 5 5
Lactobacillus reuteri s 5 5
Lactobacillus reuteri s 4 4
Lactobacillus reuteri s 4 4
Lactobacillus reuteri s 4 4
Lactobacillus reuteri s 5 5
Lactobacillus reuteri s 6 6
Paenibacillus odorifer s 4 4
Lactobacillus reuteri s 10 9
Lactobacillus plantarum s 5 5
Escherichia coli s 4 4
Lactobacillus fermentum s 13 11
Bacillus thuringiensis s 9 8
Bacillus thuringiensis s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella michiganensis s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella quasipneumoniae subsp. quasipneumoniae s 4 4
Lactobacillus plantarum s 5 5
Klebsiella michiganensis s 4 4
Haemophilus parainfluenzae s 8 7
Haemophilus parainfluenzae s 8 7
Pediococcus acidilactici s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 6 6
Lactobacillus amylophilus DSM 20533 = JCM 1125 s 6 6
Enterococcus faecalis s 5 5
Lactobacillus fermentum s 5 5
Bacillus thuringiensis s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Neisseria dentiae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 5 5
Klebsiella pneumoniae s 8 7
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 4 4
Jeotgalibaca sp. PTS2502 s 5 5
Enterobacter cloacae s 5 5
Paenibacillus larvae subsp. pulvifaciens s 15 13
Klebsiella pneumoniae subsp. pneumoniae s 6 6
Klebsiella pneumoniae s 4 4
Klebsiella pneumoniae s 6 6
Klebsiella pneumoniae s 6 6
Paenibacillus larvae subsp. pulvifaciens s 15 13
Lactobacillus reuteri s 11 10
Paenibacillus larvae subsp. pulvifaciens s 24 20
Lactobacillus fermentum s 19 16
Klebsiella pneumoniae s 4 4
Bacillus mycoides s 6 6
Klebsiella pneumoniae s 4 4
Enterobacter xiangfangensis s 4 4
Escherichia coli s 5 5
Klebsiella pneumoniae s 5 5
Lactobacillus brevis s 4 4
Escherichia coli s 4 4
Lactobacillus rhamnosus s 4 4
Sinorhizobium meliloti s 5 5
Lactobacillus fermentum s 6 6
Bacillus cereus s 4 4
Enterobacter cloacae subsp. cloacae s 4 4
Enterobacter cloacae subsp. cloacae s 4 4
Lactobacillus fermentum s 6 6
Escherichia coli s 4 4
Klebsiella pneumoniae s 4 4
Enterobacter cloacae subsp. cloacae ATCC 13047 s 5 5
Enterococcus faecium DO s 5 5
Sinorhizobium meliloti 1021 s 6 6
Yersinia pestis CO92 s 9 8
Yersinia enterocolitica subsp. enterocolitica 8081 s 9 8
[Bacillus thuringiensis] serovar konkukian str. 97-27 s 8 7
Sinorhizobium fredii NGR234 s 11 10
Escherichia coli IAI39 s 27 23
Shigella flexneri 2a str. 301 s 4 4
Lactobacillus plantarum WCFS1 s 5 5
Escherichia coli UMN026 s 5 5
Klebsiella pneumoniae subsp. pneumoniae HS11286 s 8 7

*p=pathogen;s=symbiont