Effective results for Burkholderia dolosa AU0158 (eggnog40)

Summary

Number of putative secreted proteins: 696
- Predicted by EffectiveT3: 212 (high confidence), 312 (low confidence)
- Predicted by EffectiveCCBD: 23 within, 4 before, 33 behind expected region 25..70aa
- Predicted by T4SEpre: 74
- Predicted by EffectiveELD: 20 eukaryotic-like domains, contained in 61 proteins (2 high, 59 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, (Type IV), Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
350701.BDAG_00829+(ER)
350701.BDAG_04377+(PF00771)ER; (ER)
350701.BDAG_01755+(PF08479)ER
350701.BDAG_01158+(mitochondrial)
350701.BDAG_03296+(mitochondrial)
350701.BDAG_04800+ER
350701.BDAG_02576+ER
350701.BDAG_02973+ER
350701.BDAG_02991(PF00771)ER
350701.BDAG_00825+(mitochondrial); (plastid)
350701.BDAG_02999+mitochondrial
350701.BDAG_00226+mitochondrial
350701.BDAG_04905+(mitochondrial)
350701.BDAG_03803+(mitochondrial); plastid
350701.BDAG_04698(PF08479)ER
350701.BDAG_02506(>)(mitochondrial)
350701.BDAG_02508+ER
350701.BDAG_01896(PF08479)ER
350701.BDAG_01897(PF13332)(mitochondrial)
350701.BDAG_03322+(mitochondrial); (plastid)
350701.BDAG_00695+(mitochondrial); (plastid)
350701.BDAG_04911+mitochondrial
350701.BDAG_04597(PF08479)ER
350701.BDAG_03813+ER
350701.BDAG_04687+(mitochondrial); plastid
350701.BDAG_01075(<)ER
350701.BDAG_03484+ER
350701.BDAG_03306(PF08479)mitochondrial; (mitochondrial)
350701.BDAG_00474+(PF10142)(mitochondrial)
350701.BDAG_03274+ER; (ER)
350701.BDAG_03785+(ER)
350701.BDAG_00656(>)ER
350701.BDAG_04693(PF08479)mitochondrial; (mitochondrial)
350701.BDAG_01850+ER
350701.BDAG_01912(>)(mitochondrial)
350701.BDAG_04897+mitochondrial; plastid
350701.BDAG_00315+(mitochondrial)
350701.BDAG_04097+(mitochondrial)
350701.BDAG_03472+ER
350701.BDAG_03073+(mitochondrial)
350701.BDAG_04366+(mitochondrial); plastid
350701.BDAG_04086+mitochondrial; plastid
350701.BDAG_03196(PF14716) (PF14792) (PF14791)
350701.BDAG_03534+(mitochondrial); (plastid)
350701.BDAG_03538+(mitochondrial)
350701.BDAG_04180+(mitochondrial)
350701.BDAG_02297+mitochondrial
350701.BDAG_02125(>)ER
350701.BDAG_03459+mitochondrial
350701.BDAG_00433+(mitochondrial)
350701.BDAG_00638+mitochondrial; ER
350701.BDAG_02861(>)mitochondrial
350701.BDAG_04294+ER
350701.BDAG_01001+(mitochondrial)
350701.BDAG_01485+ER
350701.BDAG_02858+ER
350701.BDAG_04063(>)ER
350701.BDAG_01383(>)ER
350701.BDAG_01386(>)(mitochondrial)
350701.BDAG_01908+(mitochondrial)
350701.BDAG_00536+(ER)
350701.BDAG_01027(>)ER
350701.BDAG_00392+(mitochondrial); (plastid)
350701.BDAG_00393+(mitochondrial); (plastid)
350701.BDAG_02387+ER
350701.BDAG_00324+(ER)
350701.BDAG_03706(PF00872)(mitochondrial)
350701.BDAG_04863+ER
350701.BDAG_04266(PF08479)ER
350701.BDAG_01526+mitochondrial
350701.BDAG_01035+(mitochondrial)
350701.BDAG_00479+ER
350701.BDAG_02081+mitochondrial
350701.BDAG_01992(>)ER
350701.BDAG_00735+ER
350701.BDAG_00025+(mitochondrial)
350701.BDAG_02961+(plastid)
350701.BDAG_02746++
350701.BDAG_01763+plastid
350701.BDAG_00238(+)ER
350701.BDAG_00057(PF00771)(mitochondrial)
350701.BDAG_02400(+)mitochondrial
350701.BDAG_02571(>)(mitochondrial)
350701.BDAG_02575+(ER)
350701.BDAG_02970+(plastid)
350701.BDAG_00139(<)+
350701.BDAG_02534+(plastid)
350701.BDAG_03104(+)(ER)
350701.BDAG_01272+(plastid)
350701.BDAG_03818+(plastid)
350701.BDAG_03004(PF08479)(ER)
350701.BDAG_03003+(PF13332)
350701.BDAG_01939+(plastid)
350701.BDAG_00683(+)(ER); (mitochondrial)
350701.BDAG_01798(+)mitochondrial
350701.BDAG_04142(>)(ER)
350701.BDAG_04548+plastid
350701.BDAG_02011(+)(mitochondrial)
350701.BDAG_04992(+)mitochondrial; (mitochondrial)
350701.BDAG_01118(+)(ER)
350701.BDAG_04371(PF00771)(ER)
350701.BDAG_04376+(plastid)
350701.BDAG_04557(+)(ER)
350701.BDAG_04122+(plastid)
350701.BDAG_04647+plastid
350701.BDAG_03200(PF14716) (PF14791)
350701.BDAG_04949(+)mitochondrial; (mitochondrial)
350701.BDAG_00084+(plastid)
350701.BDAG_00793+(mitochondrial)
350701.BDAG_02276+(mitochondrial)
350701.BDAG_00904+(ER)
350701.BDAG_00823+(ER)
350701.BDAG_04880+(PF12588)
350701.BDAG_04538+(plastid)
350701.BDAG_02305(+)(mitochondrial)
350701.BDAG_01804(+)(ER)
350701.BDAG_04646(+)ER
350701.BDAG_00967+plastid
350701.BDAG_00185(>)(mitochondrial)
350701.BDAG_00763(+)ER
350701.BDAG_00298(+)(mitochondrial)
350701.BDAG_04199+(plastid)
350701.BDAG_04062+(plastid)
350701.BDAG_03331+plastid
350701.BDAG_00774+(mitochondrial)
350701.BDAG_00284(+)(ER)
350701.BDAG_01005(+)(mitochondrial); plastid
350701.BDAG_02459+(plastid)
350701.BDAG_04284(+)(mitochondrial); plastid
350701.BDAG_00532+(mitochondrial)
350701.BDAG_02302+(mitochondrial)
350701.BDAG_03713(+)(ER)
350701.BDAG_03374++
350701.BDAG_01711(>)(mitochondrial)
350701.BDAG_03974(+)(mitochondrial)
350701.BDAG_04655(+)(mitochondrial); (plastid)
350701.BDAG_04725+(>)
350701.BDAG_02365(+)(ER)
350701.BDAG_01739++
350701.BDAG_03140+(mitochondrial)
350701.BDAG_00541+(mitochondrial)
350701.BDAG_01121(+)(ER); (plastid)
350701.BDAG_04480(+)mitochondrial; plastid
350701.BDAG_02598(+)(ER)
350701.BDAG_02776(+)mitochondrial; (mitochondrial)
350701.BDAG_02085+(plastid)
350701.BDAG_00731+plastid
350701.BDAG_02562+
350701.BDAG_02561+
350701.BDAG_02960(+)(mitochondrial)
350701.BDAG_02964+
350701.BDAG_04740(PF06884)
350701.BDAG_02980+
350701.BDAG_02983+
350701.BDAG_02986+
350701.BDAG_02741+
350701.BDAG_00830+
350701.BDAG_02189+
350701.BDAG_02180+
350701.BDAG_01983+
350701.BDAG_03960+
350701.BDAG_01871+
350701.BDAG_01626+
350701.BDAG_04805(+)plastid
350701.BDAG_00235+
350701.BDAG_00588+
350701.BDAG_01509+
350701.BDAG_01477+
350701.BDAG_02408+
350701.BDAG_01024(PF13565)
350701.BDAG_04158+
350701.BDAG_04159+
350701.BDAG_02197+
350701.BDAG_02354+
350701.BDAG_03113+
350701.BDAG_03623+
350701.BDAG_03332(PF02010)
350701.BDAG_03934+
350701.BDAG_00220+
350701.BDAG_04904+
350701.BDAG_01066(>)
350701.BDAG_04584+
350701.BDAG_01666(PF00847)
350701.BDAG_04347(+)(plastid)
350701.BDAG_00900+
350701.BDAG_04699(PF13332)
350701.BDAG_04696(PF00872)
350701.BDAG_04163+
350701.BDAG_01313(PF01989)
350701.BDAG_04768(PF13964)
350701.BDAG_02501(PF10908)
350701.BDAG_02503(+)(mitochondrial)
350701.BDAG_01088+
350701.BDAG_02219+
350701.BDAG_02699(>)
350701.BDAG_00369+
350701.BDAG_00368(+)+
350701.BDAG_03109(PF00872)
350701.BDAG_03395+
350701.BDAG_03925+
350701.BDAG_00217(PF00872)
350701.BDAG_00216(PF00872)
350701.BDAG_04226(>)
350701.BDAG_04222+
350701.BDAG_04917+
350701.BDAG_04919+
350701.BDAG_04357+
350701.BDAG_01274+
350701.BDAG_04176+
350701.BDAG_00288+
350701.BDAG_02095+
350701.BDAG_01308(PF00872)
350701.BDAG_01092+
350701.BDAG_03041+
350701.BDAG_02684+
350701.BDAG_02683+
350701.BDAG_00009+
350701.BDAG_02688(PF07929)
350701.BDAG_01269(>)
350701.BDAG_04046+
350701.BDAG_03002(PF00872)
350701.BDAG_03994+
350701.BDAG_03133(+)(PF14716)
350701.BDAG_03488+
350701.BDAG_03649(PF00771)
350701.BDAG_00111(PF10908)
350701.BDAG_01930+
350701.BDAG_00128+
350701.BDAG_00243+
350701.BDAG_00207+
350701.BDAG_04214+
350701.BDAG_04849(+)plastid
350701.BDAG_00680+
350701.BDAG_04964+
350701.BDAG_04966(PF16155)
350701.BDAG_01244(+)(mitochondrial)
350701.BDAG_01306(PF07929)
350701.BDAG_01646+
350701.BDAG_04785(+)(mitochondrial)
350701.BDAG_02528+
350701.BDAG_02522+
350701.BDAG_00871+
350701.BDAG_03539+
350701.BDAG_01209(+)(plastid)
350701.BDAG_00334+
350701.BDAG_02300+
350701.BDAG_04577+
350701.BDAG_00399+
350701.BDAG_00895(PF00872)
350701.BDAG_02012+
350701.BDAG_03652+
350701.BDAG_00275+
350701.BDAG_04201+
350701.BDAG_04974+
350701.BDAG_01787+
350701.BDAG_01784(+)plastid
350701.BDAG_04374+
350701.BDAG_00095+
350701.BDAG_01659+
350701.BDAG_00489+
350701.BDAG_04645+
350701.BDAG_02386+
350701.BDAG_04794(PF13565)
350701.BDAG_02222(+)(mitochondrial)
350701.BDAG_02225+
350701.BDAG_02883+
350701.BDAG_01921+
350701.BDAG_01206+
350701.BDAG_01851+
350701.BDAG_04115+
350701.BDAG_03365+
350701.BDAG_04941+
350701.BDAG_04946+
350701.BDAG_00317+
350701.BDAG_00085+
350701.BDAG_00794(+)(ER)
350701.BDAG_04791(>)
350701.BDAG_01351+
350701.BDAG_01352+
350701.BDAG_02492+
350701.BDAG_02494+
350701.BDAG_02253+
350701.BDAG_02672(>)
350701.BDAG_02990(+)(mitochondrial)
350701.BDAG_02074(PF07929)
350701.BDAG_02070(PF00872)
350701.BDAG_02102+
350701.BDAG_04611(>)
350701.BDAG_03474(+)(mitochondrial)
350701.BDAG_00218(PF00872)
350701.BDAG_00524+
350701.BDAG_02994+
350701.BDAG_00413+
350701.BDAG_00320(PF13565)
350701.BDAG_01236(+)(mitochondrial)
350701.BDAG_01235(+)(mitochondrial)
350701.BDAG_00034+
350701.BDAG_04415+
350701.BDAG_02489+
350701.BDAG_03924+
350701.BDAG_04628(+)+
350701.BDAG_02066(PF00872)
350701.BDAG_02065(PF00872)
350701.BDAG_04394+
350701.BDAG_02116+
350701.BDAG_02119(PF00872)
350701.BDAG_03194+
350701.BDAG_01208+
350701.BDAG_00336+
350701.BDAG_04432(PF01989)
350701.BDAG_01593(>)
350701.BDAG_01376+
350701.BDAG_02871+
350701.BDAG_04616+
350701.BDAG_01113+
350701.BDAG_04367+
350701.BDAG_01012+
350701.BDAG_04448(>)
350701.BDAG_04998+
350701.BDAG_00342+
350701.BDAG_01103+
350701.BDAG_01581+
350701.BDAG_00290PF11397
350701.BDAG_02460+
350701.BDAG_04346(+)(plastid)
350701.BDAG_04656(>)
350701.BDAG_02047+
350701.BDAG_01218+
350701.BDAG_04148(+)(ER)
350701.BDAG_02281+
350701.BDAG_02288+
350701.BDAG_01496+
350701.BDAG_03620(+)(plastid)
350701.BDAG_00970+
350701.BDAG_02133+
350701.BDAG_02174+
350701.BDAG_03428+
350701.BDAG_02173(+)plastid
350701.BDAG_00086+
350701.BDAG_03085+
350701.BDAG_01822+
350701.BDAG_03559PF11397
350701.BDAG_00609+
350701.BDAG_04853+
350701.BDAG_04852+
350701.BDAG_00771+
350701.BDAG_03952+
350701.BDAG_01554(PF00872)
350701.BDAG_01398+
350701.BDAG_02835+
350701.BDAG_00099+
350701.BDAG_03035+
350701.BDAG_02924+
350701.BDAG_03065+
350701.BDAG_04703+
350701.BDAG_02705+
350701.BDAG_01636(>)
350701.BDAG_00945+
350701.BDAG_00943+
350701.BDAG_00198+
350701.BDAG_03896+
350701.BDAG_03897+
350701.BDAG_00367+
350701.BDAG_00366+
350701.BDAG_04023(>)
350701.BDAG_00706(PF13565)
350701.BDAG_00702+
350701.BDAG_04446+
350701.BDAG_04449+
350701.BDAG_03948(+)(ER)
350701.BDAG_05002(<)
350701.BDAG_01385(+)(plastid)
350701.BDAG_01497+
350701.BDAG_01493+
350701.BDAG_01490+
350701.BDAG_01498+
350701.BDAG_00388+
350701.BDAG_02445+
350701.BDAG_02621+
350701.BDAG_02622+
350701.BDAG_04047+
350701.BDAG_03608+
350701.BDAG_03152(>)
350701.BDAG_00488+
350701.BDAG_03717+
350701.BDAG_00177+
350701.BDAG_00375+
350701.BDAG_00527+
350701.BDAG_00719+
350701.BDAG_01538+
350701.BDAG_05014(PF07929)
350701.BDAG_04388+
350701.BDAG_04387(PF07720)
350701.BDAG_02439+
350701.BDAG_04494+
350701.BDAG_04953(+)(plastid)
350701.BDAG_02891+
350701.BDAG_00525(>)
350701.BDAG_02091(>)
350701.BDAG_01976(>)
350701.BDAG_01731(+)(mitochondrial)
350701.BDAG_03707(PF00872)
350701.BDAG_03382+
350701.BDAG_03156+
350701.BDAG_03360+
350701.BDAG_03568+
350701.BDAG_04862(PF13565)
350701.BDAG_01743+
350701.BDAG_01143+
350701.BDAG_01120+
350701.BDAG_00044+
350701.BDAG_01039+
350701.BDAG_04398+
350701.BDAG_04390(PF13565)
350701.BDAG_04391(PF13964)
350701.BDAG_04132+
350701.BDAG_01459+
350701.BDAG_00973(+)plastid
350701.BDAG_02425(+)(plastid)
350701.BDAG_04486+
350701.BDAG_02557+
350701.BDAG_02395+
350701.BDAG_02955(+)(plastid)
350701.BDAG_04997(+)(ER)
350701.BDAG_00470+
350701.BDAG_00804+
350701.BDAG_03251(+)(plastid)
350701.BDAG_01927+
350701.BDAG_02374+
350701.BDAG_03930(+)(plastid)
350701.BDAG_00715(>)
350701.BDAG_04005(+)(mitochondrial)
350701.BDAG_03354(>)
350701.BDAG_00059(PF13565)
350701.BDAG_00150+
350701.BDAG_04819(+)(mitochondrial)
350701.BDAG_00732(+)(plastid)
350701.BDAG_01522+
350701.BDAG_04921+
350701.BDAG_04923+
350701.BDAG_03914(PF00872)
350701.BDAG_03916(+)(ER)
350701.BDAG_03911(+)(mitochondrial)
350701.BDAG_03913+
350701.BDAG_03825+
350701.BDAG_03225(+)(mitochondrial)
350701.BDAG_00901+
350701.BDAG_01192+
350701.BDAG_04747(+)
350701.BDAG_04746(+)
350701.BDAG_02989(+)
350701.BDAG_02345(+)
350701.BDAG_01252(+)
350701.BDAG_01870(+)
350701.BDAG_01873(+)
350701.BDAG_03347(+)
350701.BDAG_00120(+)
350701.BDAG_00582(+)
350701.BDAG_03904(+)
350701.BDAG_01610(+)
350701.BDAG_01479(+)
350701.BDAG_04110(+)
350701.BDAG_04114(+)
350701.BDAG_01476(+)
350701.BDAG_01955(+)
350701.BDAG_00450(+)
350701.BDAG_02930(+)
350701.BDAG_01542+
350701.BDAG_04812(+)
350701.BDAG_04900(+)
350701.BDAG_01260(+)
350701.BDAG_02530(+)
350701.BDAG_02533(+)
350701.BDAG_04692(+)
350701.BDAG_03790(+)
350701.BDAG_00852(+)
350701.BDAG_02697(+)
350701.BDAG_02322(+)
350701.BDAG_04330(+)
350701.BDAG_02033(+)
350701.BDAG_04331(+)
350701.BDAG_03038(+)
350701.BDAG_03106(+)
350701.BDAG_03102(+)
350701.BDAG_01899(+)
350701.BDAG_03631(+)
350701.BDAG_03635(+)
350701.BDAG_00102(+)
350701.BDAG_00452(+)
350701.BDAG_04019(+)
350701.BDAG_04827(+)
350701.BDAG_00692(+)
350701.BDAG_00697(+)
350701.BDAG_00074(+)
350701.BDAG_01678(+)
350701.BDAG_02642(+)
350701.BDAG_04172(+)
350701.BDAG_03545(+)
350701.BDAG_01090(+)
350701.BDAG_03245(+)
350701.BDAG_01552(+)
350701.BDAG_01795(+)
350701.BDAG_01738(+)
350701.BDAG_00590(+)
350701.BDAG_02026(+)
350701.BDAG_01936(+)
350701.BDAG_03586(+)
350701.BDAG_03899(+)
350701.BDAG_00684(+)
350701.BDAG_00661(+)
350701.BDAG_01472(+)
350701.BDAG_01643(+)
350701.BDAG_01555(+)
350701.BDAG_01334(+)
350701.BDAG_04547(+)
350701.BDAG_02786(+)
350701.BDAG_00236(+)
350701.BDAG_01758(+)
350701.BDAG_02658(+)
350701.BDAG_04327(+)
350701.BDAG_04570(+)
350701.BDAG_04576(+)
350701.BDAG_03272(+)
350701.BDAG_03277(+)
350701.BDAG_04207(+)
350701.BDAG_04970(+)
350701.BDAG_01780(+)
350701.BDAG_01258(+)
350701.BDAG_00092(+)
350701.BDAG_00784(+)
350701.BDAG_01650(+)
350701.BDAG_03870(+)
350701.BDAG_01320(+)
350701.BDAG_02221(+)
350701.BDAG_02882(+)
350701.BDAG_02312(+)
350701.BDAG_03060(+)
350701.BDAG_02794(+)
350701.BDAG_02008(+)
350701.BDAG_02417(+)
350701.BDAG_01918(+)
350701.BDAG_00266(+)
350701.BDAG_00464(+)
350701.BDAG_00080(+)
350701.BDAG_01680(+)
350701.BDAG_04091(+)
350701.BDAG_01350(+)
350701.BDAG_02254(+)
350701.BDAG_00941(+)
350701.BDAG_02673(+)
350701.BDAG_02671(+)
350701.BDAG_02105(+)
350701.BDAG_04462(+)
350701.BDAG_03670(+)
350701.BDAG_03671(+)
350701.BDAG_03077(+)
350701.BDAG_03071(+)
350701.BDAG_01905(+)
350701.BDAG_02993(+)
350701.BDAG_00411(+)
350701.BDAG_04954(+)
350701.BDAG_03965(+)
350701.BDAG_03928(+)
350701.BDAG_01138(+)
350701.BDAG_04400(+)
350701.BDAG_04084(+)
350701.BDAG_04083(+)
350701.BDAG_04007(+)
350701.BDAG_02080(+)
350701.BDAG_04535(+)
350701.BDAG_02484(+)
350701.BDAG_02481(+)
350701.BDAG_02243(+)
350701.BDAG_01797(+)
350701.BDAG_03314(+)
350701.BDAG_02111(+)
350701.BDAG_03198(+)
350701.BDAG_01451(+)
350701.BDAG_01809(+)
350701.BDAG_03536(+)
350701.BDAG_03535(+)
350701.BDAG_00337(+)
350701.BDAG_03929(+)
350701.BDAG_03540(+)
350701.BDAG_02478(+)
350701.BDAG_02613(+)
350701.BDAG_02612(+)
350701.BDAG_02058(+)
350701.BDAG_03182(+)
350701.BDAG_03451(+)
350701.BDAG_03054(+)
350701.BDAG_04337(+)
350701.BDAG_04473(+)
350701.BDAG_03753(+)
350701.BDAG_01586(+)
350701.BDAG_01582(+)
350701.BDAG_00297(+)
350701.BDAG_00296(+)
350701.BDAG_00299(+)
350701.BDAG_01369(+)
350701.BDAG_03057(+)
350701.BDAG_02464(+)
350701.BDAG_02918(+)
350701.BDAG_02868(+)
350701.BDAG_01423(+)
350701.BDAG_00338(+)
350701.BDAG_01427(+)
350701.BDAG_02289(+)
350701.BDAG_00748(+)
350701.BDAG_03236(+)
350701.BDAG_02175(+)
350701.BDAG_01951(+)
350701.BDAG_01489(+)
350701.BDAG_01488(+)
350701.BDAG_02854(+)
350701.BDAG_04671(+)
350701.BDAG_00280(+)
350701.BDAG_00947(+)
350701.BDAG_00949(+)
350701.BDAG_03434(+)
350701.BDAG_03063(+)
350701.BDAG_01845(+)
350701.BDAG_01831(+)
350701.BDAG_00164(+)
350701.BDAG_00362(+)
350701.BDAG_01990(+)
350701.BDAG_01764(+)
350701.BDAG_01765(+)
350701.BDAG_02847(+)
350701.BDAG_02840(+)
350701.BDAG_00180(+)
350701.BDAG_01805(+)
350701.BDAG_02716(+)
350701.BDAG_01603(+)
350701.BDAG_03159(+)
350701.BDAG_02168(+)
350701.BDAG_00990(+)
350701.BDAG_03716(+)
350701.BDAG_03397(+)
350701.BDAG_00176(+)
350701.BDAG_00572(+)
350701.BDAG_04274(+)
350701.BDAG_01157(+)
350701.BDAG_00445(+)
350701.BDAG_03229(+)
350701.BDAG_04815(+)
350701.BDAG_04383(+)
350701.BDAG_02912(+)
350701.BDAG_03852(+)
350701.BDAG_01527(+)
350701.BDAG_00639(+)
350701.BDAG_00924(+)
350701.BDAG_02363(+)
350701.BDAG_02831(+)
350701.BDAG_04993(+)
350701.BDAG_04605(+)
350701.BDAG_01859(+)
350701.BDAG_03383(+)
350701.BDAG_03363(+)
350701.BDAG_00144(+)
350701.BDAG_00490(+)
350701.BDAG_01690(+)
350701.BDAG_04301(+)
350701.BDAG_00740(+)
350701.BDAG_04264(+)
350701.BDAG_01706(+)
350701.BDAG_03968(+)
350701.BDAG_00032(+)
350701.BDAG_00045(+)
350701.BDAG_01458(+)
350701.BDAG_02888(+)
350701.BDAG_02956(+)
350701.BDAG_01432(+)
350701.BDAG_04733(+)
350701.BDAG_04736(+)
350701.BDAG_02082(+)
350701.BDAG_01692(+)
350701.BDAG_00473(+)
350701.BDAG_00716(+)
350701.BDAG_01846(+)
350701.BDAG_02655(+)
350701.BDAG_01840(+)
350701.BDAG_03176(+)
350701.BDAG_03227(+)
350701.BDAG_03171(+)
350701.BDAG_01996(+)
350701.BDAG_00634(+)
350701.BDAG_00552(+)
350701.BDAG_03379(+)
350701.BDAG_03910(+)
350701.BDAG_01719(+)
350701.BDAG_04036(+)
350701.BDAG_01514(+)
350701.BDAG_01049(+)
350701.BDAG_03330(+)
350701.BDAG_01462(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 2.9 (29/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0.0 (0/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 2.375 (19/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================