Metamenu

Effective results for Roseiflexus sp. RS-1 (eggnog40)

Summary

Number of putative secreted proteins: 498
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 62 eukaryotic-like domains, contained in 498 proteins (132 high, 366 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
357808.RoseRS_0780(PF08241) (PF00534) (PF13439)ER
357808.RoseRS_2150(PF13439) (PF00534)(mitochondrial)
357808.RoseRS_2379(PF00534) (PF13439)ER
357808.RoseRS_2372(PF13439) (PF00534)(mitochondrial)
357808.RoseRS_4414(PF13439) (PF00534)(mitochondrial)
357808.RoseRS_0846(PF00534) (PF13439)(mitochondrial)
357808.RoseRS_2840PF13579 (PF13692)mitochondrial; (mitochondrial)
357808.RoseRS_4383(PF13439) (PF00534)mitochondrial; (mitochondrial)
357808.RoseRS_1065(PF00534) (PF13439)(ER)
357808.RoseRS_4448PF13579 (PF13692)mitochondrial
357808.RoseRS_4263(PF00534) PF13579(mitochondrial)
357808.RoseRS_4267(PF00534) (PF13439)ER
357808.RoseRS_3643(PF00534) PF13579ER
357808.RoseRS_0506(PF13439) (PF00534)(ER)
357808.RoseRS_1104(PF00534) (PF13439)(mitochondrial)
357808.RoseRS_2630(PF11790)ER
357808.RoseRS_3544(PF00092)ER
357808.RoseRS_0086PF01909(mitochondrial)
357808.RoseRS_4229(PF13439) (PF00534)(mitochondrial)
357808.RoseRS_4221(PF13231)ER
357808.RoseRS_3230(PF12773)ER
357808.RoseRS_2796(PF00092)ER
357808.RoseRS_2799(PF00092)ER
357808.RoseRS_0095(PF11028)(mitochondrial)
357808.RoseRS_0092(PF01740)(ER)
357808.RoseRS_0787(PF01740)ER
357808.RoseRS_4300(PF13231)mitochondrial
357808.RoseRS_2802PF12768ER
357808.RoseRS_3956(PF08239)ER
357808.RoseRS_3148(PF13559)ER
357808.RoseRS_3140(PF10162)ER
357808.RoseRS_3497(PF13768)ER
357808.RoseRS_3961(PF12158)ER
357808.RoseRS_1408(PF12158)ER
357808.RoseRS_2568PF01909(mitochondrial)
357808.RoseRS_2566(PF01740)mitochondrial; (mitochondrial)
357808.RoseRS_1098PF13579 (PF13692)(ER)
357808.RoseRS_1099(PF02366)(ER)
357808.RoseRS_1096(PF11790)ER
357808.RoseRS_2190(PF07678)ER
357808.RoseRS_2998(PF01059)ER
357808.RoseRS_3011(PF13768)ER
357808.RoseRS_2422(PF08241)(mitochondrial)
357808.RoseRS_2162(PF13185)ER
357808.RoseRS_2231(PF01059)ER
357808.RoseRS_3907(PF13231)(mitochondrial)
357808.RoseRS_1986(PF08241)(ER)
357808.RoseRS_3008(PF13768)ER
357808.RoseRS_0852(PF13231)mitochondrial; (mitochondrial)
357808.RoseRS_2509(PF01740)(ER)
357808.RoseRS_2507(PF13231)ER
357808.RoseRS_2503(PF01740)ER
357808.RoseRS_1530(PF00534) (PF12038)(plastid)
357808.RoseRS_1841(PF13231)(mitochondrial)
357808.RoseRS_1844(PF00498)mitochondrial
357808.RoseRS_0867(PF13559)ER
357808.RoseRS_3432(PF03209)ER
357808.RoseRS_4482(PF13185)(mitochondrial); (ER)
357808.RoseRS_4158(PF01740)ER
357808.RoseRS_2527(PF00534) (PF06925)(mitochondrial)
357808.RoseRS_2646(PF01740)ER
357808.RoseRS_2393PF02415ER
357808.RoseRS_1271(PF13415)ER
357808.RoseRS_1278(PF13231)(ER)
357808.RoseRS_2888(PF08239)ER
357808.RoseRS_0643(PF12158)ER
357808.RoseRS_3120(PF13439) (PF00534)(ER)
357808.RoseRS_1044(PF08695)mitochondrial; ER
357808.RoseRS_2659(PF13231)ER
357808.RoseRS_2658(PF13231)(mitochondrial); mitochondrial
357808.RoseRS_0394(PF13231)ER
357808.RoseRS_0391(PF08239)ER
357808.RoseRS_0659(PF13231)(ER)
357808.RoseRS_2470(PF13439) (PF00534)(mitochondrial)
357808.RoseRS_2711(PF02080)ER
357808.RoseRS_2660(PF12158)ER
357808.RoseRS_1251(PF14684)ER
357808.RoseRS_2283PF02415ER
357808.RoseRS_1710(PF01740)ER
357808.RoseRS_1935(PF01740)ER
357808.RoseRS_0812(PF01740)(mitochondrial)
357808.RoseRS_1936(PF01740)(mitochondrial)
357808.RoseRS_2704(PF13768)ER
357808.RoseRS_3099(PF02514)(mitochondrial)
357808.RoseRS_1396(PF00092)ER
357808.RoseRS_3473(PF01740)ER
357808.RoseRS_2058(PF02080)ER
357808.RoseRS_4264(PF13692)mitochondrial
357808.RoseRS_1832(PF13559)ER
357808.RoseRS_1903(PF03209)ER
357808.RoseRS_2603(PF01930)ER
357808.RoseRS_1018(PF12158)(ER); ER
357808.RoseRS_4527(PF02080)ER
357808.RoseRS_1340PF13579 (PF13692)(plastid)
357808.RoseRS_4290(PF02080)mitochondrial; ER
357808.RoseRS_1640PF02415ER
357808.RoseRS_4186(PF01740)mitochondrial; (mitochondrial)
357808.RoseRS_2841(PF00534) PF13579(ER)
357808.RoseRS_1912(PF03209)ER
357808.RoseRS_1916(PF01740)mitochondrial
357808.RoseRS_3186(PF13559)ER
357808.RoseRS_0351(PF02844) (PF02843)(mitochondrial)
357808.RoseRS_4461(PF05685)ER
357808.RoseRS_4245(PF08239)(ER)
357808.RoseRS_1100(PF02366)ER
357808.RoseRS_1103(PF08241)(mitochondrial)
357808.RoseRS_1891(PF00092)ER
357808.RoseRS_4507PF01909mitochondrial; (plastid)
357808.RoseRS_0163(PF01740)ER; (ER)
357808.RoseRS_1755(PF03984)ER
357808.RoseRS_3993(PF10462)ER
357808.RoseRS_4094(PF00534)(ER)
357808.RoseRS_2957(PF11028)(mitochondrial)
357808.RoseRS_0885(PF02190)ER
357808.RoseRS_0409(PF01740)ER
357808.RoseRS_0407(PF02080)ER
357808.RoseRS_2637(PF00534) (PF13439)
357808.RoseRS_0372(PF13518) (PF13592)
357808.RoseRS_4400(PF13492) (PF13185)
357808.RoseRS_0157PF13359 PF13613
357808.RoseRS_3833PF13359 PF13613
357808.RoseRS_4132(PF06925)(ER)
357808.RoseRS_0412(PF13185)(ER)
357808.RoseRS_2548(PF13439) (PF00534)
357808.RoseRS_2371(PF00534) (PF13439)
357808.RoseRS_4233(PF13692)(ER)
357808.RoseRS_4232(PF00534) (PF13439)
357808.RoseRS_0424(PF13439) (PF00534)
357808.RoseRS_2787(PF13518) (PF13592)
357808.RoseRS_0221(PF01740)(ER)
357808.RoseRS_3487(PF13518) (PF13592)
357808.RoseRS_0302PF13359 PF13613
357808.RoseRS_4438(PF00534) (PF13439)
357808.RoseRS_4436PF13579 (PF13692)
357808.RoseRS_4434PF13579(mitochondrial)
357808.RoseRS_4432PF13579(ER)
357808.RoseRS_0126(PF13518) (PF13592)
357808.RoseRS_3369(PF00534) (PF13439)
357808.RoseRS_0442(PF13518) (PF13592)
357808.RoseRS_0687(PF13428)(mitochondrial)
357808.RoseRS_0847(PF00534) (PF13439)
357808.RoseRS_0844PF01909(plastid)
357808.RoseRS_2510(PF00534)(mitochondrial)
357808.RoseRS_2769(PF12773) (PF00498)
357808.RoseRS_2694(PF13492) (PF13185)
357808.RoseRS_2692(PF02844) (PF02843)
357808.RoseRS_3583(PF13439) (PF00534)
357808.RoseRS_1339PF13579 (PF13692)
357808.RoseRS_2345PF13359 PF13613
357808.RoseRS_1520(PF00498)plastid
357808.RoseRS_1221PF13359 PF13613
357808.RoseRS_1638(PF13492) (PF00498)
357808.RoseRS_1630(PF00534) PF13579
357808.RoseRS_2502(PF13439) (PF00534)
357808.RoseRS_2179PF13579 (PF13692)
357808.RoseRS_2434(PF12773) (PF00498)
357808.RoseRS_3594PF13579 (PF13692)
357808.RoseRS_0101PF13359 PF13613
357808.RoseRS_0410(PF02366)(ER)
357808.RoseRS_0484(PF13492) (PF13185)
357808.RoseRS_4579(PF00534) PF13579
357808.RoseRS_2251(PF01555)(mitochondrial)
357808.RoseRS_2525(PF11965) (PF02514)
357808.RoseRS_2520(PF00092)(plastid)
357808.RoseRS_1873PF13359 PF13613
357808.RoseRS_3605PF13579 (PF13692)
357808.RoseRS_2390PF13359 PF13613
357808.RoseRS_1477PF13359 PF13613
357808.RoseRS_3935(PF00498)(plastid)
357808.RoseRS_4033PF13359 PF13613
357808.RoseRS_3121(PF00534) PF13579
357808.RoseRS_2380(PF00534) (PF13439)
357808.RoseRS_0247PF13359 PF13613
357808.RoseRS_2407(PF02080)(mitochondrial)
357808.RoseRS_4045(PF00534) (PF13439)
357808.RoseRS_3389PF13359 PF13613
357808.RoseRS_0658(PF13428)(ER)
357808.RoseRS_3380(PF00092)(mitochondrial)
357808.RoseRS_3382PF13359 PF13613
357808.RoseRS_2716(PF01740)(ER)
357808.RoseRS_1383PF13359 PF13613
357808.RoseRS_0629(PF13518) (PF13592)
357808.RoseRS_1805(PF13518) (PF13592)
357808.RoseRS_0539PF13359 PF13613
357808.RoseRS_0824(PF13231)(plastid)
357808.RoseRS_2448PF05557 (PF08239)
357808.RoseRS_3816(PF13492) (PF13185)
357808.RoseRS_2677(PF00534) (PF13692)
357808.RoseRS_3472(PF13439) (PF00534)
357808.RoseRS_3471(PF13439) (PF13692)
357808.RoseRS_2295(PF13492) (PF13185)
357808.RoseRS_4446(PF00534) (PF13439)
357808.RoseRS_4266(PF00534)(plastid)
357808.RoseRS_0751PF13359 PF13613
357808.RoseRS_0635PF13359 PF13613
357808.RoseRS_4066(PF01555)(ER)
357808.RoseRS_3274PF13359 PF13613
357808.RoseRS_0834PF13359 PF13613
357808.RoseRS_1904(PF11965) (PF02514)
357808.RoseRS_1230(PF00534) PF13579
357808.RoseRS_2339(PF00534) (PF13439)
357808.RoseRS_3880(PF13518) (PF13592)
357808.RoseRS_4075(PF00534) (PF13439)
357808.RoseRS_4074(PF13439) (PF00534)
357808.RoseRS_1826(PF01555)(plastid)
357808.RoseRS_1823(PF00498)(mitochondrial)
357808.RoseRS_4083PF13359 PF13613
357808.RoseRS_3063(PF02080)(mitochondrial)
357808.RoseRS_3062(PF02080)(mitochondrial)
357808.RoseRS_3447PF01909(ER)
357808.RoseRS_4091PF01909(mitochondrial)
357808.RoseRS_4093PF01909plastid
357808.RoseRS_4095PF13359 PF13613
357808.RoseRS_3332(PF00534) (PF13439)
357808.RoseRS_2958(PF00534) PF13579
357808.RoseRS_2553(PF05685)
357808.RoseRS_2558PF02371
357808.RoseRS_2635(PF01740)
357808.RoseRS_2124(PF02190)
357808.RoseRS_1737PF02371
357808.RoseRS_1119(PF14684)
357808.RoseRS_1736(PF02985)
357808.RoseRS_1204PF02371
357808.RoseRS_0375(PF01555)
357808.RoseRS_3548(PF05685)
357808.RoseRS_0084PF05168
357808.RoseRS_0085PF05168
357808.RoseRS_0083PF01909
357808.RoseRS_2307(PF01740)
357808.RoseRS_4403(PF08239)
357808.RoseRS_4409PF14853
357808.RoseRS_4227(PF00534)
357808.RoseRS_0154PF02371
357808.RoseRS_2833PF02371
357808.RoseRS_4135(PF05685)
357808.RoseRS_1562(PF08239)
357808.RoseRS_2941PF02371
357808.RoseRS_2499(PF13185)
357808.RoseRS_1781(PF00498)
357808.RoseRS_0965(PF14572)
357808.RoseRS_2288PF02371
357808.RoseRS_1949(PF13185)
357808.RoseRS_3309PF02371
357808.RoseRS_3041PF01909
357808.RoseRS_3040PF05168
357808.RoseRS_4420PF01909
357808.RoseRS_2280PF02371
357808.RoseRS_2281PF02371
357808.RoseRS_2797(PF05685)
357808.RoseRS_0925PF02371
357808.RoseRS_3554(PF05685)
357808.RoseRS_3557PF01909
357808.RoseRS_3553(PF05685)
357808.RoseRS_4416(PF13231)
357808.RoseRS_4418PF01909
357808.RoseRS_0788PF02371
357808.RoseRS_1412(PF05685)
357808.RoseRS_1413(PF05685)
357808.RoseRS_4127(PF08239)
357808.RoseRS_0558(PF02514)
357808.RoseRS_3955(PF01875)
357808.RoseRS_0953(PF01555)
357808.RoseRS_1951(PF13428)
357808.RoseRS_0420(PF05685)
357808.RoseRS_2145(PF13185)
357808.RoseRS_2147(PF00498)
357808.RoseRS_3496(PF00498)
357808.RoseRS_0315(PF13559)
357808.RoseRS_3767(PF01740)
357808.RoseRS_1897(PF13185)
357808.RoseRS_2364(PF13185)
357808.RoseRS_4425(PF08241)
357808.RoseRS_4427(PF05685)
357808.RoseRS_4336(PF05685)
357808.RoseRS_4331(PF01930)
357808.RoseRS_0135(PF01740)
357808.RoseRS_4205(PF05685)
357808.RoseRS_0547PF01909
357808.RoseRS_0433PF02371
357808.RoseRS_3026(PF13492)
357808.RoseRS_3796PF07217
357808.RoseRS_2174PF05168
357808.RoseRS_2778(PF02190)
357808.RoseRS_3771(PF13492)
357808.RoseRS_1092(PF14684)
357808.RoseRS_1091(PF08241)
357808.RoseRS_1326PF02371
357808.RoseRS_0231(PF13185)
357808.RoseRS_2192PF05168
357808.RoseRS_2191PF01909
357808.RoseRS_4435(PF08241)
357808.RoseRS_2223(PF05685)
357808.RoseRS_0124(PF01555)
357808.RoseRS_3368(PF00534)
357808.RoseRS_3803PF02371
357808.RoseRS_3800(PF01740)
357808.RoseRS_0053(PF01740)
357808.RoseRS_1882(PF02384)
357808.RoseRS_0445PF13613
357808.RoseRS_0683(PF13692)
357808.RoseRS_0684(PF05685)
357808.RoseRS_3378(PF00498)
357808.RoseRS_3371(PF13185)
357808.RoseRS_0849(PF08241)
357808.RoseRS_2423(PF08241)
357808.RoseRS_3165(PF03209)
357808.RoseRS_2161(PF01740)
357808.RoseRS_2768(PF00092)
357808.RoseRS_0334(PF13231)
357808.RoseRS_3746(PF05685)
357808.RoseRS_1081(PF00534)
357808.RoseRS_0200(PF00025)
357808.RoseRS_2183(PF01555)
357808.RoseRS_2239(PF13439)
357808.RoseRS_3908(PF13231)
357808.RoseRS_4009(PF01555)
357808.RoseRS_3343PF12315
357808.RoseRS_3349(PF00092)
357808.RoseRS_0855(PF13692)
357808.RoseRS_0584PF02371
357808.RoseRS_2505(PF05685)
357808.RoseRS_0217(PF05685)
357808.RoseRS_2246(PF12773)
357808.RoseRS_4589PF02371
357808.RoseRS_2241(PF05685)
357808.RoseRS_1450PF01909
357808.RoseRS_1451PF05168
357808.RoseRS_1531PF02371
357808.RoseRS_0072PF02371
357808.RoseRS_0074PF01909
357808.RoseRS_3919PF01909
357808.RoseRS_3918PF05168
357808.RoseRS_1627PF02371
357808.RoseRS_0468(PF08241)
357808.RoseRS_0460(PF02384)
357808.RoseRS_0467(PF08241)
357808.RoseRS_0918(PF05685)
357808.RoseRS_2532PF01909
357808.RoseRS_2538(PF02384)
357808.RoseRS_1843(PF00092)
357808.RoseRS_2404(PF05685)
357808.RoseRS_2406(PF02080)
357808.RoseRS_2409(PF01875)
357808.RoseRS_2740(PF05685)
357808.RoseRS_0264(PF05685)
357808.RoseRS_3436PF01909
357808.RoseRS_3437PF05168
357808.RoseRS_4189(PF01740)
357808.RoseRS_4088(PF08241)
357808.RoseRS_4571(PF05685)
357808.RoseRS_4394(PF14572)
357808.RoseRS_4029(PF13185)
357808.RoseRS_4627(PF13185)
357808.RoseRS_1618(PF13185)
357808.RoseRS_1615(PF13185)
357808.RoseRS_0900PF01909
357808.RoseRS_2529PF01909
357808.RoseRS_1872(PF01930)
357808.RoseRS_0870PF02371
357808.RoseRS_2414(PF13185)
357808.RoseRS_2087(PF02080)
357808.RoseRS_2640(PF05685)
357808.RoseRS_0274PF01909
357808.RoseRS_2397(PF02384)
357808.RoseRS_2392(PF14885)
357808.RoseRS_2260(PF05685)
357808.RoseRS_1511PF02371
357808.RoseRS_4381(PF08241)
357808.RoseRS_1605(PF02190)
357808.RoseRS_3288(PF01740)
357808.RoseRS_3938(PF00498)
357808.RoseRS_0807(PF08241)
357808.RoseRS_3124PF01909
357808.RoseRS_3125PF02371
357808.RoseRS_3633PF02371
357808.RoseRS_1041PF02371
357808.RoseRS_3703PF02371
357808.RoseRS_3709(PF05685)
357808.RoseRS_0242(PF13231)
357808.RoseRS_0243(PF13231)
357808.RoseRS_1466(PF08239)
357808.RoseRS_1463(PF00092)
357808.RoseRS_1462(PF00498)
357808.RoseRS_1469(PF02190)
357808.RoseRS_0029(PF01740)
357808.RoseRS_1674(PF00498)
357808.RoseRS_1672(PF00498)
357808.RoseRS_1673(PF00498)
357808.RoseRS_1670(PF00498)
357808.RoseRS_1671(PF00498)
357808.RoseRS_0734(PF02384)
357808.RoseRS_0736(PF02384)
357808.RoseRS_3383(PF08662)
357808.RoseRS_3255PF02371
357808.RoseRS_2472(PF08241)
357808.RoseRS_3711(PF05685)
357808.RoseRS_3710(PF05685)
357808.RoseRS_0252(PF13185)
357808.RoseRS_3409(PF05685)
357808.RoseRS_3408(PF05685)
357808.RoseRS_1259(PF08239)
357808.RoseRS_2284(PF01555)
357808.RoseRS_0685(PF05685)
357808.RoseRS_1667(PF00498)
357808.RoseRS_1669(PF00498)
357808.RoseRS_0728(PF05685)
357808.RoseRS_3392(PF02985)
357808.RoseRS_1713(PF05685)
357808.RoseRS_3815(PF02190)
357808.RoseRS_2915PF02371
357808.RoseRS_2707(PF13231)
357808.RoseRS_3658(PF00498)
357808.RoseRS_2676(PF13692)
357808.RoseRS_1069(PF05685)
357808.RoseRS_3476(PF01740)
357808.RoseRS_3505PF01909
357808.RoseRS_3508(PF01740)
357808.RoseRS_4537(PF14572)
357808.RoseRS_1243(PF02384)
357808.RoseRS_4442(PF05685)
357808.RoseRS_4443(PF05685)
357808.RoseRS_4440(PF05685)
357808.RoseRS_4441(PF05685)
357808.RoseRS_4444(PF05685)
357808.RoseRS_4445(PF05685)
357808.RoseRS_4281(PF05685)
357808.RoseRS_4284(PF01555)
357808.RoseRS_3386(PF00498)
357808.RoseRS_4199(PF01740)
357808.RoseRS_3874PF02371
357808.RoseRS_1720(PF00534)
357808.RoseRS_0520(PF13185)
357808.RoseRS_2900PF02371
357808.RoseRS_2453PF01909
357808.RoseRS_3642(PF13692)
357808.RoseRS_3510(PF08241)
357808.RoseRS_2028(PF13185)
357808.RoseRS_2020(PF06925)
357808.RoseRS_4528PF01909
357808.RoseRS_2336(PF08241)
357808.RoseRS_4455PF02371
357808.RoseRS_1643PF02371
357808.RoseRS_4278(PF08241)
357808.RoseRS_3882PF02371
357808.RoseRS_0749(PF08241)
357808.RoseRS_4184(PF01555)
357808.RoseRS_0603(PF08241)
357808.RoseRS_0604(PF01740)
357808.RoseRS_2842(PF13185)
357808.RoseRS_2843PF02371
357808.RoseRS_2595(PF05685)
357808.RoseRS_1828(PF12899)
357808.RoseRS_2935PF01909
357808.RoseRS_2936(PF05685)
357808.RoseRS_2937(PF05685)
357808.RoseRS_2939(PF02384)
357808.RoseRS_1911(PF08241)
357808.RoseRS_2691(PF02384)
357808.RoseRS_3182(PF05685)
357808.RoseRS_3691(PF01555)
357808.RoseRS_3457PF01909
357808.RoseRS_0350(PF01740)
357808.RoseRS_0196(PF13185)
357808.RoseRS_4090PF05168
357808.RoseRS_4513(PF01555)
357808.RoseRS_4514PF02371
357808.RoseRS_4517PF02371
357808.RoseRS_4465(PF08241)
357808.RoseRS_0777PF02371
357808.RoseRS_0779(PF13231)
357808.RoseRS_4241(PF13231)
357808.RoseRS_3517PF01909
357808.RoseRS_0619PF02371
357808.RoseRS_2851(PF01740)
357808.RoseRS_3984(PF08241)
357808.RoseRS_4089(PF08241)
357808.RoseRS_4086(PF08241)
357808.RoseRS_0509(PF08241)
357808.RoseRS_2920PF02371
357808.RoseRS_0981(PF05685)
357808.RoseRS_0980(PF05685)
357808.RoseRS_4452(PF13185)
357808.RoseRS_1217(PF05685)
357808.RoseRS_3536(PF01740)
357808.RoseRS_2954PF01909
357808.RoseRS_2312(PF14684)
357808.RoseRS_0769PF01909
357808.RoseRS_4252(PF16011)
357808.RoseRS_3498(PF08239)
357808.RoseRS_3842PF01909
357808.RoseRS_3847PF05168
357808.RoseRS_3846PF01909
357808.RoseRS_2822(PF00498)
357808.RoseRS_3996(PF05685)
357808.RoseRS_0821PF02371
357808.RoseRS_2959(PF13231)
357808.RoseRS_0400(PF08241)
357808.RoseRS_0401(PF13692)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================