Effective results for Anaeromyxobacter sp. Fw109-5 (eggnog40)

Summary

Number of putative secreted proteins: 217
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 45 eukaryotic-like domains, contained in 217 proteins (18 high, 199 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
404589.Anae109_4492(PF13432) (PF13174)ER
404589.Anae109_3402(PF13432) (PF13174)ER
404589.Anae109_1669(PF01814)(mitochondrial)
404589.Anae109_1685(PF01814)(mitochondrial)
404589.Anae109_0318(PF02446)ER
404589.Anae109_3573(PF04885)ER
404589.Anae109_3774(PF13432)ER
404589.Anae109_3791(PF01844)(mitochondrial)
404589.Anae109_1300(PF01844)(mitochondrial)
404589.Anae109_1953(PF13432)ER; (ER)
404589.Anae109_2596(PF04143)ER; (ER)
404589.Anae109_2118(PF02163)ER
404589.Anae109_1362PF13320ER
404589.Anae109_0141(PF13432)ER
404589.Anae109_3850(PF01844)(mitochondrial)
404589.Anae109_2853(PF14686)ER
404589.Anae109_1804(PF01597)ER
404589.Anae109_3193(PF01814)mitochondrial; (mitochondrial)
404589.Anae109_2665(PF03283)ER
404589.Anae109_2464(PF13432)ER
404589.Anae109_1161(PF02163)ER
404589.Anae109_0509(PF09861)(mitochondrial)
404589.Anae109_0503PF13320ER
404589.Anae109_0344(PF01844)(mitochondrial)
404589.Anae109_0437PF14360(ER)
404589.Anae109_2277(PF07994)ER
404589.Anae109_2936(PF13174)ER
404589.Anae109_3477(PF13432)ER
404589.Anae109_3476(PF13432)ER
404589.Anae109_3345(PF04143)ER
404589.Anae109_2294(PF13432)(mitochondrial)
404589.Anae109_2240(PF13492)(mitochondrial); (plastid)
404589.Anae109_2289(PF13432)ER
404589.Anae109_0259(PF13432)ER
404589.Anae109_3703(PF02163)ER
404589.Anae109_3386(PF13432)ER
404589.Anae109_2255(PF13432)ER
404589.Anae109_4164(PF01814)(mitochondrial)
404589.Anae109_3717(PF13431)ER
404589.Anae109_3399(PF00158)(mitochondrial)
404589.Anae109_4278(PF01597)ER
404589.Anae109_3011(PF02358)(mitochondrial)
404589.Anae109_1621PF13320ER
404589.Anae109_1395PF13320ER
404589.Anae109_4108(PF04143)ER; (ER)
404589.Anae109_4107(PF04143)ER
404589.Anae109_4291(PF07994)(mitochondrial)
404589.Anae109_1897(PF13432)(ER)
404589.Anae109_2771PF09239(mitochondrial)
404589.Anae109_0677(PF13432)mitochondrial
404589.Anae109_3694(PF13432)ER
404589.Anae109_3963(PF13432)ER
404589.Anae109_2761(PF06245)mitochondrial
404589.Anae109_1646PF14008mitochondrial
404589.Anae109_0335(PF03283)ER
404589.Anae109_3378PF14008ER
404589.Anae109_3756(PF13174)ER
404589.Anae109_1528(PF13431)mitochondrial; ER
404589.Anae109_0923(PF04885)ER
404589.Anae109_2963(PF01814)(ER)
404589.Anae109_2966(PF02446)(mitochondrial)
404589.Anae109_2092(PF00158) (PF02954)
404589.Anae109_1061(PF00158) (PF02954)
404589.Anae109_1847(PF00158) (PF02954)
404589.Anae109_1687(PF00158) (PF02954)
404589.Anae109_1332(PF01844)(mitochondrial)
404589.Anae109_0684(PF00158) (PF02954)
404589.Anae109_3777(PF00158) (PF02954)
404589.Anae109_3400(PF01844)(plastid)
404589.Anae109_3404(PF00158) (PF02954)
404589.Anae109_1951(PF00158) (PF02954)
404589.Anae109_2442(PF00158) (PF02954)
404589.Anae109_1563(PF00158) (PF02954)
404589.Anae109_0965(PF00158) (PF02954)
404589.Anae109_2106(PF06176)(mitochondrial)
404589.Anae109_1798(PF00158) (PF02954)
404589.Anae109_1449(PF01844)(plastid)
404589.Anae109_3191(PF00158) (PF02954)
404589.Anae109_1017(PF00158) (PF02954)
404589.Anae109_0506(PF00158) (PF02954)
404589.Anae109_4152(PF00158) (PF02954)
404589.Anae109_4158(PF01844)(plastid)
404589.Anae109_2878(PF00158) (PF02954)
404589.Anae109_2492(PF00158) (PF02954)
404589.Anae109_1355(PF01814)(ER)
404589.Anae109_3045(PF00158) (PF02954)
404589.Anae109_1105(PF00158) (PF02954)
404589.Anae109_4399(PF00158) (PF02954)
404589.Anae109_1431(PF01844)(plastid)
404589.Anae109_3075(PF01844)(plastid)
404589.Anae109_3385(PF13432) (PF13174)
404589.Anae109_2258(PF00158) (PF02954)
404589.Anae109_2429(PF00158) (PF02954)
404589.Anae109_4389(PF00158) (PF02954)
404589.Anae109_0732(PF00158) (PF02954)
404589.Anae109_0889(PF00158) (PF02954)
404589.Anae109_0086(PF00158) (PF02954)
404589.Anae109_2620(PF00158) (PF02954)
404589.Anae109_1632(PF01844)(plastid)
404589.Anae109_1700(PF01844)(plastid)
404589.Anae109_1414(PF06245)(mitochondrial)
404589.Anae109_4112(PF00158) (PF02954)
404589.Anae109_3013(PF00012)(plastid)
404589.Anae109_3725(PF00158) (PF02954)
404589.Anae109_3359(PF00158) (PF02954)
404589.Anae109_0671(PF00158) (PF02954)
404589.Anae109_3039(PF01844)(plastid)
404589.Anae109_3032(PF00158) (PF02954)
404589.Anae109_3581(PF00158) (PF02954)
404589.Anae109_4341(PF13432) (PF13174)
404589.Anae109_0110(PF00158) (PF02954)
404589.Anae109_0601(PF00158) (PF02954)
404589.Anae109_3115(PF13432) (PF13174)
404589.Anae109_2379(PF00158) (PF02954)
404589.Anae109_0852(PF00158) (PF02954)
404589.Anae109_4242(PF00158) (PF02954)
404589.Anae109_4467(PF00025)
404589.Anae109_3769(PF01142)
404589.Anae109_2787PF07998
404589.Anae109_1797PF07998
404589.Anae109_1840(PF13432)
404589.Anae109_1686(PF01814)
404589.Anae109_4257(PF00158)
404589.Anae109_0006PF07998
404589.Anae109_4500(PF04519)
404589.Anae109_4470(PF02163)
404589.Anae109_4471(PF13432)
404589.Anae109_4474(PF00012)
404589.Anae109_2683(PF00012)
404589.Anae109_2428(PF01814)
404589.Anae109_2426(PF01814)
404589.Anae109_1302(PF14791)
404589.Anae109_0942(PF13432)
404589.Anae109_3547(PF13432)
404589.Anae109_3145(PF01814)
404589.Anae109_2128(PF05189)
404589.Anae109_2233(PF00012)
404589.Anae109_2543(PF13492)
404589.Anae109_0659(PF13432)
404589.Anae109_0792(PF13492)
404589.Anae109_0975PF10393
404589.Anae109_2205(PF02954)
404589.Anae109_2202PF00154
404589.Anae109_2595(PF04143)
404589.Anae109_0816(PF01844)
404589.Anae109_4021(PF05706)
404589.Anae109_1969(PF05761)
404589.Anae109_1568(PF00012)
404589.Anae109_3528(PF04519)
404589.Anae109_2911(PF08326)
404589.Anae109_1802(PF01597)
404589.Anae109_1378(PF01142)
404589.Anae109_1481(PF13432)
404589.Anae109_0998(PF01844)
404589.Anae109_2264(PF00012)
404589.Anae109_0696(PF13432)
404589.Anae109_1586(PF14721)
404589.Anae109_4151(PF13492)
404589.Anae109_3618(PF09861)
404589.Anae109_3052(PF01814)
404589.Anae109_3504(PF01814)
404589.Anae109_2900(PF01844)
404589.Anae109_3428(PF13432)
404589.Anae109_2682(PF13432)
404589.Anae109_4144(PF13432)
404589.Anae109_4418(PF09752)
404589.Anae109_2114(PF00477)
404589.Anae109_2022(PF00012)
404589.Anae109_2947(PF03169)
404589.Anae109_4174(PF13432)
404589.Anae109_0411(PF01844)
404589.Anae109_3072(PF02446)
404589.Anae109_2389(PF02358)
404589.Anae109_3814(PF13432)
404589.Anae109_2653PF00154
404589.Anae109_2650(PF01844)
404589.Anae109_1607(PF01814)
404589.Anae109_0641(PF00012)
404589.Anae109_0065PF09764
404589.Anae109_0264(PF03169)
404589.Anae109_3398(PF13432)
404589.Anae109_3930(PF13432)
404589.Anae109_3750PF00154
404589.Anae109_1383(PF00477)
404589.Anae109_4119(PF01814)
404589.Anae109_4288(PF03982)
404589.Anae109_3012(PF00012)
404589.Anae109_3344(PF04143)
404589.Anae109_2523(PF01597)
404589.Anae109_1131(PF02358)
404589.Anae109_1523(PF00012)
404589.Anae109_3898(PF01814)
404589.Anae109_3001(PF13492)
404589.Anae109_3134(PF02163)
404589.Anae109_2998(PF01814)
404589.Anae109_3910(PF02954)
404589.Anae109_2770PF04406
404589.Anae109_1272(PF00012)
404589.Anae109_1471(PF13432)
404589.Anae109_0456PF00154
404589.Anae109_0455(PF07766)
404589.Anae109_0450(PF01844)
404589.Anae109_0459(PF14791)
404589.Anae109_3103(PF13492)
404589.Anae109_3691(PF04519)
404589.Anae109_3692(PF04519)
404589.Anae109_1648(PF01814)
404589.Anae109_1516(PF01844)
404589.Anae109_4013(PF13432)
404589.Anae109_0332(PF03169)
404589.Anae109_3592(PF13432)
404589.Anae109_3685(PF13432)
404589.Anae109_3758(PF00025)
404589.Anae109_4064(PF13432)
404589.Anae109_1213(PF09861)
404589.Anae109_1212(PF03015)
404589.Anae109_0618(PF01814)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================