Effective results for Pseudoflavonifractor capillosus ATCC 29799 (eggnog40)

Summary

Number of putative secreted proteins: 361
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 58 eukaryotic-like domains, contained in 361 proteins (51 high, 310 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
411467.BACCAP_00207(PF14310) (PF01915) (PF00933)mitochondrial
411467.BACCAP_00593(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_03493(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_00857(PF14310) (PF01915) (PF00933)(ER)
411467.BACCAP_03105(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_03729(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_03727(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_03724(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_04264(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_01681(PF14310) (PF01915) (PF00933)ER
411467.BACCAP_03479(PF04998) (PF04997) (PF05000) (PF00623)
411467.BACCAP_03225(PF04998) (PF04997) (PF05000) (PF00623)
411467.BACCAP_00938(PF00395)ER
411467.BACCAP_00441(PF01381)(mitochondrial)
411467.BACCAP_02840PF00239(mitochondrial)
411467.BACCAP_03140(PF00395)ER
411467.BACCAP_02561(PF02361)mitochondrial
411467.BACCAP_02564(PF00664)(ER)
411467.BACCAP_02565(PF00664)mitochondrial
411467.BACCAP_02142(PF00664)mitochondrial
411467.BACCAP_02212(PF05524)(ER)
411467.BACCAP_02213(PF00381)ER
411467.BACCAP_02168(PF00664)(ER)
411467.BACCAP_01631(PF06100)(mitochondrial)
411467.BACCAP_01635(PF02361)ER
411467.BACCAP_01527(PF00395)ER
411467.BACCAP_00859(PF14310) (PF01915) (PF00933)
411467.BACCAP_00587(PF01381)(mitochondrial)
411467.BACCAP_03790(PF00395)ER
411467.BACCAP_03571(PF00381)(mitochondrial); (plastid)
411467.BACCAP_03480(PF04560) (PF04565) (PF00562)
411467.BACCAP_00267(PF00890)ER
411467.BACCAP_02164(PF02361)mitochondrial
411467.BACCAP_02161(PF00664)mitochondrial
411467.BACCAP_01053(PF00395)(ER); ER
411467.BACCAP_00908(PF00395)(ER)
411467.BACCAP_00671(PF00395)ER
411467.BACCAP_00279(PF00395)ER
411467.BACCAP_00877(PF00395)ER
411467.BACCAP_01476(PF00395)ER
411467.BACCAP_02408(PF00890)ER
411467.BACCAP_02531(PF00395)ER
411467.BACCAP_02536(PF00664)mitochondrial
411467.BACCAP_04702(PF00395)ER
411467.BACCAP_02218(PF00395)ER
411467.BACCAP_03613(PF01992)mitochondrial; (mitochondrial)
411467.BACCAP_03614(PF01496)ER
411467.BACCAP_03728(PF14310) (PF01915) (PF00933)
411467.BACCAP_02744(PF00395)ER
411467.BACCAP_03238(PF00395)ER
411467.BACCAP_01077(PF00395)ER
411467.BACCAP_01703(PF00395)ER
411467.BACCAP_01674(PF00395)ER
411467.BACCAP_02547(PF00664)mitochondrial
411467.BACCAP_03600(PF14310) (PF01915) (PF00933)
411467.BACCAP_03936(PF00438) (PF02773) (PF02772)
411467.BACCAP_04723(PF00664)mitochondrial
411467.BACCAP_04177(PF06541)ER
411467.BACCAP_01396(PF00890)ER
411467.BACCAP_04054(PF10662)(mitochondrial)
411467.BACCAP_00820(PF00395)ER
411467.BACCAP_00531(PF01554)ER
411467.BACCAP_00827(PF00664)(ER)
411467.BACCAP_03251(PF06541)ER
411467.BACCAP_03413(PF01381)(mitochondrial)
411467.BACCAP_02099(PF00890)ER
411467.BACCAP_02270(PF00395)ER
411467.BACCAP_02389(PF00436)(mitochondrial)
411467.BACCAP_04280(PF14310) (PF01915) (PF00933)
411467.BACCAP_04667(PF00395)ER
411467.BACCAP_01010(PF00436)mitochondrial; (mitochondrial)
411467.BACCAP_00526(PF00395)ER
411467.BACCAP_02665(PF00395)ER
411467.BACCAP_03621(PF01813)mitochondrial
411467.BACCAP_02866(PF00395)ER
411467.BACCAP_03392(PF01554)(ER)
411467.BACCAP_03404(PF00664)(mitochondrial)
411467.BACCAP_02440(PF00664)ER
411467.BACCAP_04458(PF00395)ER
411467.BACCAP_04454(PF00395)ER
411467.BACCAP_04455(PF00395)ER
411467.BACCAP_04366(PF01554)ER
411467.BACCAP_01225(PF02361)ER
411467.BACCAP_01649(PF00664)(mitochondrial)
411467.BACCAP_04271(PF00890)ER
411467.BACCAP_00350(PF00395)ER
411467.BACCAP_00199(PF00395)ER
411467.BACCAP_03874(PF00395)ER
411467.BACCAP_02872(PF00395)ER
411467.BACCAP_00549(PF00395)(mitochondrial)
411467.BACCAP_04649(PF00395)ER
411467.BACCAP_01694(PF00933)ER
411467.BACCAP_01693(PF00395)ER
411467.BACCAP_01361(PF00890)ER
411467.BACCAP_00612(PF16886)(ER)
411467.BACCAP_00765(PF00890)ER
411467.BACCAP_03646(PF00664)mitochondrial
411467.BACCAP_03647(PF00664)mitochondrial
411467.BACCAP_01598(PF04488)(mitochondrial)
411467.BACCAP_01115(PF02361)(ER)
411467.BACCAP_00374(PF00395)ER
411467.BACCAP_00156(PF00395)mitochondrial
411467.BACCAP_03981(PF00395)ER
411467.BACCAP_02100(PF00890)ER
411467.BACCAP_02103(PF00395)ER
411467.BACCAP_02585(PF00664)(mitochondrial)
411467.BACCAP_02329(PF00890)ER
411467.BACCAP_01568PF00239mitochondrial; (mitochondrial)
411467.BACCAP_01780(PF00438) (PF02773) (PF02772)
411467.BACCAP_00569(PF00395)ER
411467.BACCAP_00098(PF00395)ER
411467.BACCAP_00894(PF00438) (PF02773) (PF02772)
411467.BACCAP_01629(PF00933)ER
411467.BACCAP_03663(PF06541)ER
411467.BACCAP_02824(PF00890)ER
411467.BACCAP_03440(PF12826) (PF01653) (PF03120)
411467.BACCAP_03534(PF00395)ER
411467.BACCAP_02004(PF12826) (PF01653) (PF03120)
411467.BACCAP_04302(PF11070)ER
411467.BACCAP_00311(PF00395)ER
411467.BACCAP_01792(PF03432)(mitochondrial)
411467.BACCAP_00958(PF01381)(mitochondrial)
411467.BACCAP_00133(PF06541)ER
411467.BACCAP_00558(PF00395)ER
411467.BACCAP_01443(PF00395)ER
411467.BACCAP_00618(PF01496)mitochondrial
411467.BACCAP_00610(PF01813)(mitochondrial)
411467.BACCAP_02834PF00239(mitochondrial)
411467.BACCAP_03309(PF00395)ER
411467.BACCAP_02637(PF12826) (PF01653) (PF03120)
411467.BACCAP_03547(PF01381)(mitochondrial)
411467.BACCAP_03542(PF01554)(ER)
411467.BACCAP_00308(PF00395)ER
411467.BACCAP_00058(PF00664)ER
411467.BACCAP_02794(PF01554)(mitochondrial)
411467.BACCAP_03228(PF04560) (PF04565) (PF00562)
411467.BACCAP_02575(PF02361)ER
411467.BACCAP_02579(PF00664)mitochondrial
411467.BACCAP_02578(PF00664)ER
411467.BACCAP_02157(PF02361)(ER)
411467.BACCAP_04436(PF00890)ER
411467.BACCAP_01087(PF00890)ER
411467.BACCAP_04695(PF00395)mitochondrial
411467.BACCAP_03587(PF00381)(plastid)
411467.BACCAP_02776PF03266(mitochondrial)
411467.BACCAP_02160(PF00664)(plastid)
411467.BACCAP_02180(PF00664)(ER)
411467.BACCAP_04373(PF00395)(ER)
411467.BACCAP_01614(PF04488)(mitochondrial)
411467.BACCAP_01516(PF14310) (PF00395)
411467.BACCAP_04618(PF01807)(ER)
411467.BACCAP_04844(PF00381)(plastid)
411467.BACCAP_01650(PF00664)(ER)
411467.BACCAP_04853(PF14310) (PF00933)
411467.BACCAP_00990(PF00395)(plastid)
411467.BACCAP_02173(PF02361)(ER)
411467.BACCAP_01415(PF00664)(mitochondrial)
411467.BACCAP_04131PF03266(mitochondrial)
411467.BACCAP_02557(PF00664)(mitochondrial)
411467.BACCAP_02319(PF02361)(mitochondrial)
411467.BACCAP_00463(PF01554)(ER)
411467.BACCAP_00057(PF00664)(mitochondrial)
411467.BACCAP_03042PF00239(mitochondrial)
411467.BACCAP_00933(PF00381)
411467.BACCAP_00200(PF00664)
411467.BACCAP_01338(PF01381)
411467.BACCAP_00847(PF00395)
411467.BACCAP_01343(PF06541)
411467.BACCAP_03034(PF01555)
411467.BACCAP_03039(PF05063)
411467.BACCAP_03811(PF01555)
411467.BACCAP_03817(PF01381)
411467.BACCAP_03498(PF01381)
411467.BACCAP_03964(PF01807)
411467.BACCAP_03968PF00239
411467.BACCAP_02146(PF00664)
411467.BACCAP_02147(PF00664)
411467.BACCAP_02966PF00239
411467.BACCAP_02967PF00239
411467.BACCAP_02965PF00239
411467.BACCAP_02968PF00239
411467.BACCAP_02365(PF01807)
411467.BACCAP_02367(PF01554)
411467.BACCAP_02502(PF03432)
411467.BACCAP_02167(PF00664)
411467.BACCAP_00326(PF01381)
411467.BACCAP_01981PF00239
411467.BACCAP_01850PF00239
411467.BACCAP_00076(PF05524)
411467.BACCAP_00075(PF00381)
411467.BACCAP_03979(PF01381)
411467.BACCAP_03572(PF05524)
411467.BACCAP_02179(PF00664)
411467.BACCAP_02992(PF03432)
411467.BACCAP_02221(PF16011)
411467.BACCAP_04349PF00239
411467.BACCAP_04579PF00302
411467.BACCAP_04578(PF06100)
411467.BACCAP_01535(PF10662)
411467.BACCAP_01448(PF05524)
411467.BACCAP_01449(PF00381)
411467.BACCAP_00662(PF01381)
411467.BACCAP_00467(PF01554)
411467.BACCAP_00489(PF05524)
411467.BACCAP_02762(PF01381)
411467.BACCAP_03585(PF12826)
411467.BACCAP_02184(PF02361)
411467.BACCAP_02432(PF01381)
411467.BACCAP_04483(PF01381)
411467.BACCAP_04628PF00239
411467.BACCAP_01610(PF05704)
411467.BACCAP_03006(PF01381)
411467.BACCAP_02753(PF02906)
411467.BACCAP_03590(PF01554)
411467.BACCAP_03359(PF00436)
411467.BACCAP_02537(PF00664)
411467.BACCAP_02249(PF01554)
411467.BACCAP_02241(PF02421)
411467.BACCAP_04810(PF01381)
411467.BACCAP_02917PF00239
411467.BACCAP_04813PF00239
411467.BACCAP_04707(PF01381)
411467.BACCAP_04631PF00239
411467.BACCAP_04149(PF01381)
411467.BACCAP_01048(PF01381)
411467.BACCAP_01047PF00302
411467.BACCAP_00391(PF00395)
411467.BACCAP_04594(PF05063)
411467.BACCAP_01609(PF04488)
411467.BACCAP_01869(PF01381)
411467.BACCAP_00738(PF12646)
411467.BACCAP_00024(PF00436)
411467.BACCAP_00029(PF00890)
411467.BACCAP_03619(PF16886)
411467.BACCAP_03618(PF01991)
411467.BACCAP_03617(PF01990)
411467.BACCAP_03925(PF00436)
411467.BACCAP_04574(PF00890)
411467.BACCAP_02746(PF02906)
411467.BACCAP_03432(PF01381)
411467.BACCAP_04557(PF01381)
411467.BACCAP_04609(PF05063)
411467.BACCAP_01078(PF01381)
411467.BACCAP_01070(PF01885)
411467.BACCAP_01259(PF02421)
411467.BACCAP_00255PF00239
411467.BACCAP_00811(PF02906)
411467.BACCAP_03286(PF01381)
411467.BACCAP_03287PF00239not used
411467.BACCAP_03932PF12224
411467.BACCAP_02695PF00239
411467.BACCAP_02644(PF00436)
411467.BACCAP_04837(PF01554)
411467.BACCAP_04610(PF01555)
411467.BACCAP_04614PF00239
411467.BACCAP_01068(PF01381)
411467.BACCAP_04595(PF01555)
411467.BACCAP_01719PF00239
411467.BACCAP_01806(PF01381)
411467.BACCAP_00826(PF00664)
411467.BACCAP_03125PF12873
411467.BACCAP_03707(PF01381)
411467.BACCAP_03706(PF13151)
411467.BACCAP_03709(PF01381)
411467.BACCAP_01852PF00239
411467.BACCAP_01859(PF01381)
411467.BACCAP_04442(PF00890)
411467.BACCAP_04446(PF02421)
411467.BACCAP_04668(PF01554)
411467.BACCAP_04666(PF00395)
411467.BACCAP_01726PF05183
411467.BACCAP_01721(PF03432)
411467.BACCAP_00528(PF01381)
411467.BACCAP_00748(PF01381)
411467.BACCAP_02719(PF01807)
411467.BACCAP_02862PF00239
411467.BACCAP_02861PF00239
411467.BACCAP_03405(PF00664)
411467.BACCAP_02441(PF00664)
411467.BACCAP_04852(PF01915)
411467.BACCAP_01139(PF00381)
411467.BACCAP_04270(PF02906)
411467.BACCAP_03899(PF01554)
411467.BACCAP_00776(PF01381)
411467.BACCAP_02706(PF03432)
411467.BACCAP_02703(PF01555)
411467.BACCAP_02452(PF00882)
411467.BACCAP_04460(PF01381)
411467.BACCAP_00616(PF01991)
411467.BACCAP_00614(PF01990)
411467.BACCAP_00615(PF01992)
411467.BACCAP_02600(PF01381)
411467.BACCAP_03518(PF01381)
411467.BACCAP_02932(PF00395)
411467.BACCAP_04875PF12224
411467.BACCAP_04655(PF01381)
411467.BACCAP_01200(PF02906)
411467.BACCAP_01970(PF00395)
411467.BACCAP_00574(PF01381)
411467.BACCAP_00081(PF06249)
411467.BACCAP_03987PF00239
411467.BACCAP_03072(PF01554)
411467.BACCAP_03075(PF00882)
411467.BACCAP_03679(PF01381)
411467.BACCAP_02854(PF03432)
411467.BACCAP_03451(PF14490)
411467.BACCAP_02615PF00239
411467.BACCAP_02616PF00239
411467.BACCAP_02584(PF00664)
411467.BACCAP_02588(PF00664)
411467.BACCAP_02589(PF00664)
411467.BACCAP_00140(PF01381)
411467.BACCAP_02922PF00239
411467.BACCAP_02926PF12224
411467.BACCAP_01564(PF06249)
411467.BACCAP_04226PF00239
411467.BACCAP_01765(PF00436)
411467.BACCAP_01785(PF01555)
411467.BACCAP_03062(PF01555)
411467.BACCAP_03067PF00239
411467.BACCAP_02820(PF01381)
411467.BACCAP_03681(PF01381)
411467.BACCAP_03683(PF01381)
411467.BACCAP_03686(PF03432)
411467.BACCAP_02138PF00239
411467.BACCAP_01621PF00239
411467.BACCAP_03449(PF01807)
411467.BACCAP_03531(PF14490)
411467.BACCAP_02550(PF02361)
411467.BACCAP_02481(PF01381)
411467.BACCAP_04231PF11443
411467.BACCAP_01774PF12224
411467.BACCAP_01446(PF00395)
411467.BACCAP_02833PF00239
411467.BACCAP_03941(PF01555)
411467.BACCAP_03944(PF03432)
411467.BACCAP_02548(PF00664)
411467.BACCAP_02947(PF01381)
411467.BACCAP_02942(PF00395)
411467.BACCAP_02493(PF01381)
411467.BACCAP_02499PF00239
411467.BACCAP_02304(PF01554)
411467.BACCAP_04681(PF14490)
411467.BACCAP_04757(PF01554)
411467.BACCAP_01095(PF00381)
411467.BACCAP_01143(PF00395)
411467.BACCAP_04114PF00302
411467.BACCAP_00940(PF00958)
411467.BACCAP_01431(PF01381)
411467.BACCAP_00947(PF00958)
411467.BACCAP_01896(PF01885)
411467.BACCAP_03047(PF03432)
411467.BACCAP_03825PF00239
411467.BACCAP_03823PF00239
411467.BACCAP_03558(PF02421)
411467.BACCAP_04212PF00302not used
411467.BACCAP_04211PF00302not used
411467.BACCAP_01084PF00239
411467.BACCAP_04693(PF01381)
411467.BACCAP_01554(PF06249)
411467.BACCAP_04102(PF02361)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================