Effective results for Bacillus selenitireducens MLS10 (eggnog40)

Summary

Number of putative secreted proteins: 32
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 32 proteins (2 high, 30 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
439292.Bsel_0991(PF00395) (PF16403)ER
439292.Bsel_0866(PF00395)ER
439292.Bsel_2730(PF03142)ER
439292.Bsel_0819(PF00395)ER
439292.Bsel_0827(PF00395)ER
439292.Bsel_1067(PF00395)(mitochondrial)
439292.Bsel_0832(PF00395)ER
439292.Bsel_1010(PF00395)ER
439292.Bsel_0992(PF00395)ER
439292.Bsel_0993(PF00395)ER
439292.Bsel_3071(PF00395)ER
439292.Bsel_3072(PF00395)ER
439292.Bsel_3073(PF00395)ER
439292.Bsel_3069(PF00395)ER
439292.Bsel_0973(PF00395)ER
439292.Bsel_0813(PF00395)ER
439292.Bsel_3058(PF00395)ER
439292.Bsel_3057(PF00395)(ER)
439292.Bsel_0952(PF00395)ER
439292.Bsel_0953(PF00395)ER
439292.Bsel_0942(PF00395)ER
439292.Bsel_0948(PF16403)ER
439292.Bsel_0843(PF00395)ER
439292.Bsel_0844(PF00395)ER
439292.Bsel_0850(PF16403) (PF00395)(ER)
439292.Bsel_0822(PF00395)
439292.Bsel_2385(PF09419)
439292.Bsel_0810(PF00395)
439292.Bsel_0917(PF13911)
439292.Bsel_1935PF06888
439292.Bsel_1066(PF00395)
439292.Bsel_3009PF05204

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================