Effective results for Candidatus Desulforudis audaxviator MP104C (eggnog40)

Summary

Number of putative secreted proteins: 48
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 12 eukaryotic-like domains, contained in 48 proteins (1 high, 47 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
477974.Daud_1808(PF05598)(ER)
477974.Daud_1809(PF05598)(ER)
477974.Daud_1807(PF05598)(ER)
477974.Daud_1680(PF03023)ER
477974.Daud_2088(PF03023)ER
477974.Daud_1984(PF13187)ER
477974.Daud_1654(PF03023)ER
477974.Daud_0695(PF05598)(ER)
477974.Daud_1548(PF02256) (PF02906)
477974.Daud_1143(PF05189)(mitochondrial)
477974.Daud_0159(PF01609) (PF05598)
477974.Daud_0152(PF02256) (PF02906)
477974.Daud_0157(PF02256) (PF02906)
477974.Daud_1999(PF10063)(ER)
477974.Daud_0792(PF05598)(mitochondrial)
477974.Daud_1503(PF01609) (PF05598)
477974.Daud_1502(PF01609) (PF05598)
477974.Daud_0587(PF01609) (PF05598)
477974.Daud_0173(PF01609) (PF05598)
477974.Daud_1752(PF01609) (PF05598)
477974.Daud_1246(PF01609) (PF05598)
477974.Daud_2194(PF01609) (PF05598)
477974.Daud_0432(PF01609) (PF05598)
477974.Daud_1735(PF01609) (PF05598)
477974.Daud_0420(PF05598)(mitochondrial)
477974.Daud_0428(PF01609) (PF05598)
477974.Daud_0257(PF01609) (PF05598)
477974.Daud_0399(PF01609) (PF05598)
477974.Daud_1337(PF02256) (PF02906)
477974.Daud_0218(PF01609) (PF05598)
477974.Daud_0215(PF01609) (PF05598)
477974.Daud_1492(PF02933)
477974.Daud_0958(PF01609)
477974.Daud_0789(PF13187)
477974.Daud_1883(PF13187)
477974.Daud_1684(PF03023)
477974.Daud_1163(PF16760)
477974.Daud_0914(PF13187)
477974.Daud_2196PF13513
477974.Daud_0109(PF13187)
477974.Daud_0721(PF01609)
477974.Daud_1252(PF13187)
477974.Daud_1886(PF13187)
477974.Daud_1888(PF13187)
477974.Daud_0413(PF02906)
477974.Daud_0986(PF09419)
477974.Daud_1955(PF01609)
477974.Daud_0687(PF05598)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================