Effective results for Dictyoglomus turgidum DSM 6724 (eggnog40)

Summary

Number of putative secreted proteins: 17
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 17 proteins (3 high, 14 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
515635.Dtur_1715(PF02018)ER
515635.Dtur_0451(PF02018)ER
515635.Dtur_0857(PF02018)ER
515635.Dtur_1702(PF02018)ER
515635.Dtur_1651PF03351ER
515635.Dtur_0360PF15508ER
515635.Dtur_1342(PF14330)(mitochondrial)
515635.Dtur_1646(PF01789)ER
515635.Dtur_0555(PF02018)ER
515635.Dtur_1344(PF05034) (PF07476)
515635.Dtur_1583(PF03266)(mitochondrial)
515635.Dtur_0398PF16575
515635.Dtur_0171(PF13802)
515635.Dtur_1801(PF07998)
515635.Dtur_0320(PF13802)
515635.Dtur_0650(PF13802)
515635.Dtur_0490(PF13802)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================