Effective results for Sulfurospirillum deleyianum DSM 6946 (eggnog40)

Summary

Number of putative secreted proteins: 31
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 31 proteins (1 high, 30 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525898.Sdel_0117(PF00032) (PF00033)ER
525898.Sdel_1779(PF01531)(mitochondrial)
525898.Sdel_0480(PF05140)ER
525898.Sdel_1787(PF01531)(mitochondrial)
525898.Sdel_0699(PF05140)ER
525898.Sdel_0982(PF08495) (PF10442)(mitochondrial)
525898.Sdel_0951(PF11074)(mitochondrial)
525898.Sdel_0708(PF05140)ER
525898.Sdel_1767(PF02516)ER
525898.Sdel_1775PF03414(ER)
525898.Sdel_0741(PF00032) (PF00033)
525898.Sdel_0268(PF08495) (PF10442)
525898.Sdel_1832(PF00032) (PF00033)
525898.Sdel_1476(PF08495) (PF10442)
525898.Sdel_1907(PF11523)(mitochondrial)
525898.Sdel_0895(PF08495) (PF10442)
525898.Sdel_1416(PF02689)
525898.Sdel_1774(PF01531)
525898.Sdel_0933(PF01695)
525898.Sdel_1998(PF01695)
525898.Sdel_1215(PF01823)
525898.Sdel_0336(PF14336)
525898.Sdel_0923(PF01695)
525898.Sdel_1004(PF01695)
525898.Sdel_1007(PF01695)
525898.Sdel_1255(PF01695)
525898.Sdel_1257(PF01695)
525898.Sdel_1245(PF01695)
525898.Sdel_0733(PF02943)
525898.Sdel_0943(PF01695)
525898.Sdel_0778(PF01695)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================