Effective results for Desulfovibrio salexigens DSM 2638 (eggnog40)

Summary

Number of putative secreted proteins: 197
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 25 eukaryotic-like domains, contained in 197 proteins (1 high, 196 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
526222.Desal_1013(PF02743) (PF13426)ER
526222.Desal_3263(PF01627) (PF13426)ER
526222.Desal_3070(PF02743) (PF13426)mitochondrial; ER
526222.Desal_3020(PF02743) (PF13426)ER
526222.Desal_2784(PF02743) (PF13426)ER
526222.Desal_0884(PF02743) (PF13426)ER
526222.Desal_3511(PF02743) (PF13426)ER
526222.Desal_1102(PF12588)ER
526222.Desal_3508(PF00939)(ER)
526222.Desal_2639(PF13426)ER
526222.Desal_2758(PF02743)ER
526222.Desal_0717(PF13426)(ER)
526222.Desal_0275(PF02743)ER
526222.Desal_2722(PF13174)ER
526222.Desal_0727(PF07085) (PF13500)(mitochondrial)
526222.Desal_3095(PF13426)(ER)
526222.Desal_2292(PF13426)ER
526222.Desal_0263(PF02743)(mitochondrial)
526222.Desal_1735(PF14691)ER
526222.Desal_2428(PF13174)ER
526222.Desal_2390(PF02743)ER
526222.Desal_2421(PF16332)ER
526222.Desal_2642(PF13426)(mitochondrial)
526222.Desal_3267(PF02743)(ER); (mitochondrial)
526222.Desal_3466(PF04055)mitochondrial
526222.Desal_2891(PF02743)ER
526222.Desal_2677(PF02743)ER
526222.Desal_2676(PF01326)(mitochondrial)
526222.Desal_2678(PF01880)ER
526222.Desal_0925(PF14691)ER
526222.Desal_3107PF02140ER
526222.Desal_2882(PF02743)ER
526222.Desal_3044(PF07085) (PF13500)(mitochondrial)
526222.Desal_3444(PF13426)ER
526222.Desal_2870(PF01627)ER; (ER)
526222.Desal_0345(PF13426)ER
526222.Desal_1966(PF13524)ER
526222.Desal_0160(PF04055)(mitochondrial)
526222.Desal_1367(PF13426)ER
526222.Desal_3800(PF13426)ER
526222.Desal_1083(PF13426)ER
526222.Desal_3487(PF13426)ER
526222.Desal_3332(PF13426)ER
526222.Desal_3155(PF04055)mitochondrial; (mitochondrial)
526222.Desal_0910(PF00939)ER
526222.Desal_0548(PF13426)ER
526222.Desal_3033(PF13426)ER
526222.Desal_3147(PF02743)ER; (ER)
526222.Desal_1948(PF13174)ER
526222.Desal_3435(PF02743)ER
526222.Desal_3778(PF13187)mitochondrial
526222.Desal_2835(PF04055)(mitochondrial)
526222.Desal_2789(PF02743)ER
526222.Desal_0899(PF16983)(ER); ER
526222.Desal_1856(PF02743)ER
526222.Desal_2008(PF13174)ER
526222.Desal_1919(PF00059)ER
526222.Desal_1865(PF02743)(mitochondrial)
526222.Desal_1860(PF00939)ER
526222.Desal_2760(PF02743)ER
526222.Desal_2762(PF04055)(mitochondrial)
526222.Desal_2361(PF13426)ER
526222.Desal_1903(PF02743)ER
526222.Desal_2377(PF13174)ER
526222.Desal_0604(PF13426)(mitochondrial)
526222.Desal_3512(PF02743)ER
526222.Desal_3504(PF13426)(ER)
526222.Desal_3669(PF13426)(ER)
526222.Desal_0469(PF04055) (PF13187)
526222.Desal_2649(PF06968) (PF04055)
526222.Desal_1335(PF06968) (PF04055)
526222.Desal_2879(PF04055)(mitochondrial)
526222.Desal_2983(PF13174)plastid
526222.Desal_0367(PF06968) (PF04055)
526222.Desal_3001(PF07085) (PF13500)
526222.Desal_0527(PF04055)(plastid)
526222.Desal_3301(PF01627) (PF13426)
526222.Desal_0407(PF00939)(ER)
526222.Desal_2977(PF06968) (PF04055)
526222.Desal_2979(PF13500)(plastid)
526222.Desal_2570(PF07085) (PF13500)
526222.Desal_2196(PF02743)(ER)
526222.Desal_1242(PF04055)
526222.Desal_1240(PF04055)
526222.Desal_0294(PF04055)
526222.Desal_0298(PF14691)
526222.Desal_0855(PF04055)
526222.Desal_0442(PF04055)
526222.Desal_0288(PF13426)
526222.Desal_3529(PF04055)
526222.Desal_3534(PF13426)
526222.Desal_1823(PF01627)
526222.Desal_0873(PF04055)
526222.Desal_0872(PF04055)
526222.Desal_2724(PF01627)
526222.Desal_0497(PF13426)
526222.Desal_0726(PF00939)
526222.Desal_3093(PF13187)
526222.Desal_3254(PF13524)
526222.Desal_1525(PF13426)
526222.Desal_3419(PF01627)
526222.Desal_2295(PF13524)
526222.Desal_3678(PF13426)
526222.Desal_3430(PF01627)
526222.Desal_0125(PF13426)
526222.Desal_1023(PF01937)
526222.Desal_0488(PF13187)
526222.Desal_3266(PF02743)
526222.Desal_3467(PF13426)
526222.Desal_1513(PF01326)
526222.Desal_3110(PF12640)
526222.Desal_1284(PF02743)
526222.Desal_1351(PF04055)
526222.Desal_2092(PF04055)
526222.Desal_1058(PF04055)
526222.Desal_0810(PF13524)
526222.Desal_2888(PF13524)
526222.Desal_1290(PF01627)
526222.Desal_1292(PF01627)
526222.Desal_1298(PF03692)
526222.Desal_1299(PF13187)
526222.Desal_0249(PF09825)
526222.Desal_1750(PF01627)
526222.Desal_2089(PF13426)
526222.Desal_0804(PF01627)
526222.Desal_3134(PF04055)
526222.Desal_0232(PF13187)
526222.Desal_0588(PF13524)
526222.Desal_0346(PF13426)
526222.Desal_2277(PF13187)
526222.Desal_2274(PF02943)
526222.Desal_0562(PF04055)
526222.Desal_0908(PF14691)
526222.Desal_3127(PF04055)
526222.Desal_1963(PF13426)
526222.Desal_0164(PF04055)
526222.Desal_0229(PF13187)
526222.Desal_1369(PF13426)
526222.Desal_3807(PF01627)
526222.Desal_0685(PF04055)
526222.Desal_1773(PF04055)
526222.Desal_2512(PF01937)
526222.Desal_3025(PF04055)
526222.Desal_2198(PF01326)
526222.Desal_3485(PF04055)
526222.Desal_0828(PF13426)
526222.Desal_0916(PF13426)
526222.Desal_2852(PF13187)
526222.Desal_0172(PF04055)
526222.Desal_1312(PF03692)
526222.Desal_0368(PF04055)
526222.Desal_0786(PF03692)
526222.Desal_2037(PF01326)
526222.Desal_3036(PF01627)
526222.Desal_3037(PF13524)
526222.Desal_3320(PF13426)
526222.Desal_3493(PF14691)
526222.Desal_1230(PF13426)
526222.Desal_0554(PF04055)
526222.Desal_3316(PF04055)
526222.Desal_1332(PF13187)
526222.Desal_1338(PF04055)
526222.Desal_3014(PF01627)
526222.Desal_3011(PF03692)
526222.Desal_2496(PF01627)
526222.Desal_2821(PF04055)
526222.Desal_0099(PF04055)
526222.Desal_2954(PF04055)
526222.Desal_1322(PF03692)
526222.Desal_1215(PF04055)
526222.Desal_1216(PF04055)
526222.Desal_1133(PF02743)
526222.Desal_0403(PF13426)
526222.Desal_0534(PF04055)
526222.Desal_2799(PF01627)
526222.Desal_0623(PF13426)
526222.Desal_3353(PF13524)
526222.Desal_2485(PF04055)
526222.Desal_0957(PF13426)
526222.Desal_0088(PF01880)
526222.Desal_1864(PF01326)
526222.Desal_1122(PF13426)
526222.Desal_0437(PF04055)
526222.Desal_2563(PF01627)
526222.Desal_3363(PF03692)
526222.Desal_3569(PF04055)
526222.Desal_3699(PF01627)
526222.Desal_2806(PF04055)
526222.Desal_1114(PF01627)
526222.Desal_2375(PF01326)
526222.Desal_0602(PF13187)
526222.Desal_1488(PF13426)
526222.Desal_1480(PF13426)
526222.Desal_1486(PF03692)
526222.Desal_3738(PF04055)
526222.Desal_3278(PF14691)
526222.Desal_3646(PF02516)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================