Effective results for Thermoanaerobacterium thermosaccharolyticum DSM 571 (eggnog40)

Summary

Number of putative secreted proteins: 34
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 16 eukaryotic-like domains, contained in 34 proteins (1 high, 33 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
580327.Tthe_0834(PF00163)mitochondrial
580327.Tthe_0574(PF01930)ER
580327.Tthe_1731(PF00834)(ER)
580327.Tthe_2241(PF07837) (PF02971)
580327.Tthe_1037(PF01969)
580327.Tthe_1036(PF01969)
580327.Tthe_1518(PF00834)
580327.Tthe_0830(PF06777)
580327.Tthe_0234(PF02915)
580327.Tthe_0138(PF04041)
580327.Tthe_2699(PF01930)
580327.Tthe_1887(PF02915)
580327.Tthe_2038(PF02915)
580327.Tthe_0104(PF14938)
580327.Tthe_2204(PF02915)
580327.Tthe_1936(PF04041)
580327.Tthe_1929(PF04041)
580327.Tthe_1928(PF04041)
580327.Tthe_0460(PF00163)
580327.Tthe_0265(PF07085)
580327.Tthe_2670(PF02732)
580327.Tthe_1902(PF00834)
580327.Tthe_1905(PF00834)
580327.Tthe_2249(PF02915)
580327.Tthe_1114(PF07085)
580327.Tthe_1111(PF07085)
580327.Tthe_1800(PF01409)
580327.Tthe_1801(PF01409)
580327.Tthe_2613(PF01930)
580327.Tthe_0767(PF07085)
580327.Tthe_0972(PF02915)
580327.Tthe_1554PF09687
580327.Tthe_1385(PF04423)
580327.Tthe_1843(PF02475)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================