Effective results for Desulfovibrio sp. FW1012B (eggnog40)

Summary

Number of putative secreted proteins: 183
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 29 eukaryotic-like domains, contained in 183 proteins (4 high, 179 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
644968.DFW101_2498(PF01627) (PF13188)ER; (ER)
644968.DFW101_0512(PF00037) (PF13187)(mitochondrial)
644968.DFW101_0696(PF13188) (PF08448)ER
644968.DFW101_2271(PF01627) (PF08448)mitochondrial
644968.DFW101_1462(PF13188) (PF08448)(ER)
644968.DFW101_2761(PF01326)(mitochondrial)
644968.DFW101_3362(PF00037)ER
644968.DFW101_3149(PF08448)ER; (ER)
644968.DFW101_2775(PF08448)ER
644968.DFW101_0603(PF02754)ER
644968.DFW101_2391(PF07885)ER
644968.DFW101_2234(PF00037)mitochondrial
644968.DFW101_1376(PF16561)(mitochondrial)
644968.DFW101_1599(PF08448)(ER); ER
644968.DFW101_2005(PF13187)ER
644968.DFW101_1976(PF13237)mitochondrial; (mitochondrial)
644968.DFW101_0052(PF07885)ER
644968.DFW101_0364(PF08448)ER
644968.DFW101_2213(PF08448)ER
644968.DFW101_3070(PF08448)ER
644968.DFW101_1104(PF08448)ER
644968.DFW101_2453(PF08448)(ER)
644968.DFW101_3468(PF13524)ER
644968.DFW101_3088(PF08448)mitochondrial
644968.DFW101_1005(PF08448)(ER)
644968.DFW101_1831(PF08448)(ER); ER
644968.DFW101_2903(PF13534)(mitochondrial)
644968.DFW101_3400(PF04187)mitochondrial
644968.DFW101_0536(PF13188)ER
644968.DFW101_1253(PF07885)ER
644968.DFW101_2255(PF08448)ER
644968.DFW101_1923(PF05014)(ER)
644968.DFW101_1867(PF00037)ER
644968.DFW101_3321(PF01627) (PF13188) (PF08448)
644968.DFW101_0131(PF07885)mitochondrial; plastid
644968.DFW101_3107(PF01627)ER
644968.DFW101_2509(PF07885)(mitochondrial)
644968.DFW101_0486(PF08448)ER
644968.DFW101_3341PF01591ER
644968.DFW101_2758(PF01326)mitochondrial
644968.DFW101_0669(PF07885)mitochondrial
644968.DFW101_3152(PF13188)ER
644968.DFW101_1524(PF02873)(plastid)
644968.DFW101_1704PF13513(mitochondrial)
644968.DFW101_3388(PF13565) (PF13683)
644968.DFW101_2540(PF13524)(ER)
644968.DFW101_0047(PF13565) (PF13683)
644968.DFW101_2557(PF13524)(mitochondrial)
644968.DFW101_1764(PF13565) (PF13683)
644968.DFW101_1625(PF00037)(mitochondrial)
644968.DFW101_3293(PF13565) (PF13683)
644968.DFW101_0371(PF02754) (PF13534)
644968.DFW101_2206(PF13188) (PF00037)
644968.DFW101_3647(PF13565) (PF13683)
644968.DFW101_0836(PF10609)(mitochondrial)
644968.DFW101_3096(PF00037)(ER)
644968.DFW101_2044(PF02754) (PF13534)
644968.DFW101_2264(PF13188) (PF08448)
644968.DFW101_2078(PF13524)plastid
644968.DFW101_2061(PF13565) (PF13683)
644968.DFW101_1458(PF08448)(ER)
644968.DFW101_2163(PF13565) (PF13683)
644968.DFW101_1982(PF13188) (PF08448)
644968.DFW101_0583(PF01627) (PF08448)
644968.DFW101_2624(PF02754) (PF13534)
644968.DFW101_2371(PF13188) (PF08448)
644968.DFW101_1152(PF00037)
644968.DFW101_2613(PF01627)
644968.DFW101_1708(PF13237)
644968.DFW101_2389(PF13188)
644968.DFW101_0431(PF08448)
644968.DFW101_3381(PF01895)
644968.DFW101_3038PF14853
644968.DFW101_0468(PF08448)
644968.DFW101_1142(PF02754)
644968.DFW101_2601(PF13237)
644968.DFW101_2600(PF00037)
644968.DFW101_1394(PF01610)
644968.DFW101_1397(PF01610)
644968.DFW101_2773(PF01627)
644968.DFW101_1779(PF13237)
644968.DFW101_3556(PF05014)
644968.DFW101_0421(PF13237)
644968.DFW101_3040(PF08448)
644968.DFW101_0635(PF16983)
644968.DFW101_0704(PF13534)
644968.DFW101_0388(PF01610)
644968.DFW101_1945(PF01610)
644968.DFW101_3055(PF01627)
644968.DFW101_1160(PF00037)
644968.DFW101_1377(PF13524)
644968.DFW101_0157(PF08448)
644968.DFW101_0409(PF01627)
644968.DFW101_0715(PF13187)
644968.DFW101_3267(PF08448)
644968.DFW101_3268(PF01627)
644968.DFW101_3067(PF01895)
644968.DFW101_2954(PF01610)
644968.DFW101_1564(PF08448)
644968.DFW101_2141(PF08448)
644968.DFW101_1292(PF01627)
644968.DFW101_3529(PF02732)
644968.DFW101_1588(PF08448)
644968.DFW101_1741(PF02754)
644968.DFW101_1637(PF13188)
644968.DFW101_3451(PF00037)
644968.DFW101_3183(PF01627)
644968.DFW101_0162(PF01875)
644968.DFW101_2215(PF00731)
644968.DFW101_3078(PF08448)
644968.DFW101_0217(PF13524)
644968.DFW101_1106(PF01895)
644968.DFW101_2858(PF01610)
644968.DFW101_1034(PF01610)
644968.DFW101_1038(PF16561)
644968.DFW101_1358(PF13188)
644968.DFW101_2118(PF01627)
644968.DFW101_0374(PF08448)
644968.DFW101_0775(PF10609)
644968.DFW101_3086(PF01326)
644968.DFW101_1130(PF04187)
644968.DFW101_1135(PF13187)
644968.DFW101_3649(PF13524)
644968.DFW101_2055(PF01875)
644968.DFW101_3470(PF00731)
644968.DFW101_1659(PF01627)
644968.DFW101_1658(PF01326)
644968.DFW101_0692(PF02754)
644968.DFW101_1830(PF02943)
644968.DFW101_2907(PF00731)
644968.DFW101_2471(PF08448)
644968.DFW101_2049(PF01326)
644968.DFW101_0825(PF01627)
644968.DFW101_0687(PF02754)
644968.DFW101_2313(PF01627)
644968.DFW101_2317(PF05014)
644968.DFW101_2914(PF01610)
644968.DFW101_1064(PF02732)
644968.DFW101_1256(PF01326)
644968.DFW101_0819(PF01627)
644968.DFW101_2783(PF08448)
644968.DFW101_3309(PF08448)
644968.DFW101_0030(PF13187)
644968.DFW101_0036(PF08448)
644968.DFW101_3127(PF01610)
644968.DFW101_2893(PF10609)
644968.DFW101_2891(PF08448)
644968.DFW101_2896(PF13187)
644968.DFW101_2897(PF00037)
644968.DFW101_0028(PF01610)
644968.DFW101_2333(PF08448)
644968.DFW101_0241(PF08448)
644968.DFW101_0242(PF08448)
644968.DFW101_1869(PF13187)
644968.DFW101_1041(PF08448)
644968.DFW101_2407(PF00037)
644968.DFW101_1455(PF08448)
644968.DFW101_0016(PF08448)
644968.DFW101_1873(PF13187)
644968.DFW101_1872(PF13187)
644968.DFW101_1204(PF08448)
644968.DFW101_1202(PF13237)
644968.DFW101_1200(PF01627)
644968.DFW101_2506(PF01627)
644968.DFW101_2507(PF01627)
644968.DFW101_1514(PF02754)
644968.DFW101_0649(PF01895)
644968.DFW101_0641(PF08448)
644968.DFW101_0488(PF13524)
644968.DFW101_2636(PF02754)
644968.DFW101_2637(PF13187)
644968.DFW101_2633(PF13534)
644968.DFW101_2185(PF02754)
644968.DFW101_0670PF11913
644968.DFW101_2293(PF01895)
644968.DFW101_2164(PF02873)
644968.DFW101_1989(PF13188)
644968.DFW101_0459(PF02754)
644968.DFW101_3161(PF08448)
644968.DFW101_2199(PF00037)
644968.DFW101_1404(PF01610)
644968.DFW101_2176(PF08448)
644968.DFW101_3397(PF01627)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================