Effective results for Streptococcus oralis ATCC 35037 (eggnog40)
Summary
Number of putative secreted proteins: 624
- Predicted by T4SEpre: 172
- Predicted by EffectiveELD: 192 eukaryotic-like domains, contained in 506 proteins (60 high, 446 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
| Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
|---|---|---|---|---|---|
| 655813.HMPREF8579_0146 | (PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560) | ||||
| 655813.SMSK23_0583 | (PF04998) (PF04983) (PF04997) (PF00623) (PF05000) | (mitochondrial) | |||
| 655813.SMSK23_0582 | (PF04561) (PF10385) (PF04565) (PF00562) (PF04563) (PF04560) | ||||
| 655813.HMPREF8579_1755 | + | (PF14714) (PF01926) | (mitochondrial); (plastid) | ||
| 655813.HMPREF8579_0715 | (PF07517) (PF01043) (PF07516) | mitochondrial; (mitochondrial) | |||
| 655813.HMPREF8579_0145 | (PF04998) (PF04983) (PF04997) (PF05000) (PF00623) | ||||
| 655813.SMSK23_0171 | + | (PF14714) (PF01926) | (mitochondrial); (plastid) | ||
| 655813.SMSK23_0953 | (PF07517) (PF01043) (PF07516) | (mitochondrial) | |||
| 655813.HMPREF8579_1082 | (PF01926) (PF07650) | (mitochondrial) | |||
| 655813.SMSK23_0670 | (PF01479) (PF00163) | (mitochondrial) | |||
| 655813.SMSK23_0528 | (PF03947) (PF00181) | (mitochondrial) | |||
| 655813.HMPREF8579_0761 | (PF00013) (PF03726) | (mitochondrial) | |||
| 655813.HMPREF8579_0486 | (PF01479) (PF00163) | (mitochondrial) | |||
| 655813.HMPREF8579_1582 | + | (PF13155) | (mitochondrial) | ||
| 655813.SMSK23_1783 | + | (PF13155) | (mitochondrial) | ||
| 655813.HMPREF8579_0825 | (PF00298) (PF03946) | (mitochondrial) | |||
| 655813.HMPREF8579_0606 | (PF01409) (PF02912) | ER | |||
| 655813.SMSK23_1061 | (PF00298) (PF03946) | (mitochondrial) | |||
| 655813.SMSK23_1603 | (PF01926) (PF07650) | (mitochondrial) | |||
| 655813.SMSK23_0735 | (PF05257) | ER | |||
| 655813.HMPREF8579_1074 | (PF08002) | mitochondrial | |||
| 655813.HMPREF8579_0780 | (PF08022) | ER | |||
| 655813.HMPREF8579_0782 | + | ER | |||
| 655813.HMPREF8579_1094 | + | ER | |||
| 655813.SMSK23_0042 | + | ER | |||
| 655813.HMPREF8579_0230 | (PF02517) | ER | |||
| 655813.HMPREF8579_1522 | PF04991 | (ER) | |||
| 655813.SMSK23_1706 | + | ER | |||
| 655813.SMSK23_1704 | + | ER | |||
| 655813.SMSK23_1705 | + | ER | |||
| 655813.SMSK23_1709 | + | (mitochondrial) | |||
| 655813.SMSK23_0543 | (PF00327) | (mitochondrial) | |||
| 655813.SMSK23_0545 | PF00344 | mitochondrial | |||
| 655813.SMSK23_0726 | (PF01368) | ER | |||
| 655813.HMPREF8579_1086 | (PF03840) | ER | |||
| 655813.HMPREF8579_1089 | (PF03848) | (mitochondrial) | |||
| 655813.HMPREF8579_1536 | (PF04525) | (mitochondrial) | |||
| 655813.HMPREF8579_0336 | (PF01368) | ER | |||
| 655813.HMPREF8579_0203 | PF00338 | (mitochondrial) | |||
| 655813.SMSK23_0532 | PF00252 | mitochondrial; (mitochondrial) | |||
| 655813.SMSK23_0443 | (PF12368) | ER | |||
| 655813.SMSK23_0441 | (PF02517) | ER | |||
| 655813.SMSK23_0283 | (PF03644) | (mitochondrial) | |||
| 655813.SMSK23_0842 | (PF03484) (PF03147) (PF01588) | ||||
| 655813.HMPREF8579_0697 | (PF01029) | (mitochondrial) | |||
| 655813.HMPREF8579_0696 | (PF02517) | ER | |||
| 655813.SMSK23_1038 | (PF05257) | (ER) | |||
| 655813.SMSK23_0524 | PF00338 | (mitochondrial) | |||
| 655813.SMSK23_0853 | PF02916 | ER | |||
| 655813.SMSK23_0187 | (PF00230) | ER | |||
| 655813.SMSK23_1022 | + | ER | |||
| 655813.SMSK23_1020 | (PF08022) | ER | |||
| 655813.HMPREF8579_1052 | (PF00453) | mitochondrial | |||
| 655813.SMSK23_1116 | + | ER | |||
| 655813.SMSK23_1595 | (PF08002) | mitochondrial | |||
| 655813.SMSK23_0861 | (PF17101) (PF11380) (PF17102) | ||||
| 655813.SMSK23_0880 | + | ER | |||
| 655813.SMSK23_0888 | + | ER | |||
| 655813.HMPREF8579_1749 | (PF07517) (PF01043) (PF07516) | ||||
| 655813.HMPREF8579_1185 | + | (mitochondrial) | |||
| 655813.HMPREF8579_1180 | + | ER | |||
| 655813.HMPREF8579_1181 | + | ER | |||
| 655813.HMPREF8579_1182 | + | ER | |||
| 655813.HMPREF8579_0583 | (PF02096) | ER | |||
| 655813.HMPREF8579_1294 | (PF02517) | ER | |||
| 655813.HMPREF8579_0346 | (PF05257) | ER | |||
| 655813.HMPREF8579_0371 | + | mitochondrial; (mitochondrial) | |||
| 655813.SMSK23_1472 | (PF04525) | (mitochondrial) | |||
| 655813.SMSK23_0477 | + | ER | |||
| 655813.SMSK23_0091 | PF03083 | ER | |||
| 655813.HMPREF8579_1752 | + | ER | |||
| 655813.HMPREF8579_0376 | (PF01479) | (mitochondrial) | |||
| 655813.HMPREF8579_0800 | (PF05257) | mitochondrial; (mitochondrial) | |||
| 655813.HMPREF8579_0399 | (PF02096) | ER | |||
| 655813.HMPREF8579_0625 | (PF17101) (PF11380) (PF17102) | ||||
| 655813.SMSK23_1460 | PF04991 | (ER) | |||
| 655813.SMSK23_0276 | (PF01479) | (mitochondrial) | |||
| 655813.HMPREF8579_1143 | + | ER | |||
| 655813.HMPREF8579_1059 | + | ER | |||
| 655813.HMPREF8579_0382 | + | ER | |||
| 655813.SMSK23_1242 | (PF02517) | ER | |||
| 655813.HMPREF8579_0147 | (PF03714) | (mitochondrial) | |||
| 655813.HMPREF8579_1519 | PF04991 | mitochondrial | |||
| 655813.SMSK23_1076 | (PF08245) | mitochondrial | |||
| 655813.SMSK23_0413 | + | ER | |||
| 655813.SMSK23_0788 | (PF02517) | (ER) | |||
| 655813.HMPREF8579_1773 | (PF00230) | ER | |||
| 655813.HMPREF8579_0552 | (PF02517) | (ER) | |||
| 655813.HMPREF8579_0734 | (PF00013) | ER | |||
| 655813.HMPREF8579_0739 | (PF01029) | (ER) | |||
| 655813.HMPREF8579_0607 | (PF03484) (PF03147) (PF01588) | ||||
| 655813.HMPREF8579_0971 | + | ER | |||
| 655813.SMSK23_1665 | + | ER | |||
| 655813.SMSK23_0420 | (PF00230) | ER | |||
| 655813.SMSK23_0933 | (PF02517) | ER | |||
| 655813.SMSK23_0934 | (PF01029) | (mitochondrial) | |||
| 655813.SMSK23_0687 | (PF02517) | ER | |||
| 655813.HMPREF8579_1492 | (PF00886) | (mitochondrial); mitochondrial | |||
| 655813.HMPREF8579_0944 | (PF06280) | ER | |||
| 655813.HMPREF8579_1120 | + | ER | |||
| 655813.SMSK23_0113 | (PF02875) (PF08245) | (ER) | |||
| 655813.HMPREF8579_0618 | PF02916 | (mitochondrial) | |||
| 655813.SMSK23_1430 | (PF00886) | (mitochondrial); mitochondrial | |||
| 655813.SMSK23_1508 | + | ER | |||
| 655813.HMPREF8579_1487 | (PF01746) | (ER) | |||
| 655813.HMPREF8579_0842 | (PF08245) | mitochondrial | |||
| 655813.HMPREF8579_1131 | + | ER | |||
| 655813.HMPREF8579_1000 | + | ER | |||
| 655813.HMPREF8579_0288 | (PF02517) | ER | |||
| 655813.HMPREF8579_0195 | PF00252 | mitochondrial; (mitochondrial) | |||
| 655813.HMPREF8579_0068 | (PF01479) | (mitochondrial) | |||
| 655813.SMSK23_0595 | PF04103 | ER | |||
| 655813.HMPREF8579_0941 | + | ER | |||
| 655813.SMSK23_0771 | + | ER | |||
| 655813.HMPREF8579_0858 | (PF06280) | ER | |||
| 655813.HMPREF8579_0982 | (PF00230) | (ER) | |||
| 655813.SMSK23_0005 | (PF00230) | (ER) | |||
| 655813.HMPREF8579_0182 | PF00344 | mitochondrial | |||
| 655813.SMSK23_0581 | (PF03714) | (mitochondrial) | |||
| 655813.HMPREF8579_0988 | + | ER | |||
| 655813.SMSK23_1369 | (PF01509) | (mitochondrial) | |||
| 655813.SMSK23_0760 | + | mitochondrial; (mitochondrial) | |||
| 655813.SMSK23_0765 | (PF01479) | (mitochondrial) | |||
| 655813.HMPREF8579_0869 | (PF02875) (PF08245) | (ER) | |||
| 655813.SMSK23_1653 | + | ER | |||
| 655813.SMSK23_0165 | (PF07517) (PF01043) (PF07516) | ||||
| 655813.HMPREF8579_1028 | (PF01016) | mitochondrial; (mitochondrial) | |||
| 655813.HMPREF8579_1446 | (PF13177) | (mitochondrial) | |||
| 655813.SMSK23_0016 | + | ER | |||
| 655813.HMPREF8579_0643 | + | ER | |||
| 655813.SMSK23_1572 | (PF00453) | mitochondrial | |||
| 655813.SMSK23_0979 | (PF01029) | (ER) | |||
| 655813.SMSK23_0110 | + | ER | |||
| 655813.HMPREF8579_0502 | (PF02517) | ER | |||
| 655813.HMPREF8579_1476 | (PF01588) | (mitochondrial) | |||
| 655813.HMPREF8579_0252 | + | ER | |||
| 655813.HMPREF8579_0651 | + | ER | |||
| 655813.SMSK23_1520 | + | ER | |||
| 655813.SMSK23_1611 | (PF03848) | (mitochondrial) | |||
| 655813.SMSK23_1616 | + | ER | |||
| 655813.SMSK23_0818 | (PF02096) | ER | |||
| 655813.SMSK23_1386 | (PF13177) | (mitochondrial) | |||
| 655813.SMSK23_0498 | (PF02517) | ER | |||
| 655813.HMPREF8579_1681 | + | ER | |||
| 655813.SMSK23_0385 | (PF02096) | ER | |||
| 655813.HMPREF8579_1468 | (PF01649) | (mitochondrial); (plastid) | |||
| 655813.SMSK23_0039 | (PF06280) | ER | |||
| 655813.SMSK23_1457 | PF04991 | mitochondrial | |||
| 655813.HMPREF8579_0317 | + | mitochondrial; (mitochondrial) | |||
| 655813.SMSK23_1608 | (PF03840) | ER | |||
| 655813.SMSK23_0559 | (PF00133) (PF13603) | ||||
| 655813.SMSK23_0550 | (PF01000) (PF01193) | ||||
| 655813.SMSK23_0552 | (PF01196) | (mitochondrial) | |||
| 655813.SMSK23_1391 | (PF00521) (PF03989) | ||||
| 655813.SMSK23_1397 | (PF00204) (PF00986) | ||||
| 655813.SMSK23_0733 | + | (PF00889) | |||
| 655813.SMSK23_1152 | (PF02875) (PF08245) | ||||
| 655813.SMSK23_0608 | (PF13793) (PF14572) | ||||
| 655813.HMPREF8579_1675 | + | (PF16326) | |||
| 655813.HMPREF8579_1431 | (PF00521) (PF03989) | ||||
| 655813.HMPREF8579_1417 | (PF03144) (PF06421) | ||||
| 655813.SMSK23_0043 | (PF00204) (PF00986) | ||||
| 655813.SMSK23_0542 | PF03719 PF00333 | ||||
| 655813.SMSK23_0544 | + | PF00828 | |||
| 655813.SMSK23_0549 | + | PF00411 | |||
| 655813.SMSK23_1122 | + | (PF16326) | |||
| 655813.HMPREF8579_0429 | (PF13793) (PF14572) | ||||
| 655813.HMPREF8579_0744 | (PF01154) (PF08540) | ||||
| 655813.HMPREF8579_0201 | + | (PF00573) | |||
| 655813.HMPREF8579_0588 | + | (mitochondrial) | |||
| 655813.HMPREF8579_1775 | + | (ER) | |||
| 655813.SMSK23_1001 | (PF00013) (PF03726) | ||||
| 655813.SMSK23_0537 | PF00673 PF00281 | ||||
| 655813.SMSK23_0531 | PF00189 (PF07650) | ||||
| 655813.SMSK23_0845 | + | PF00572 | |||
| 655813.SMSK23_0841 | (PF01409) (PF02912) | ||||
| 655813.HMPREF8579_1342 | + | (PF16326) | |||
| 655813.SMSK23_0526 | + | (PF00573) | |||
| 655813.SMSK23_1458 | PF04991 | (ER) | |||
| 655813.SMSK23_0984 | (PF01154) (PF08540) | ||||
| 655813.SMSK23_0189 | + | (ER) | |||
| 655813.HMPREF8579_1644 | (PF02875) (PF08245) | ||||
| 655813.SMSK23_0072 | + | (PF03462) | |||
| 655813.HMPREF8579_1426 | (PF01509) | (mitochondrial) | |||
| 655813.HMPREF8579_1357 | (PF13793) (PF14572) | ||||
| 655813.HMPREF8579_1514 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_0178 | + | PF00411 | |||
| 655813.HMPREF8579_0176 | (PF01196) | (mitochondrial) | |||
| 655813.HMPREF8579_0177 | (PF01000) (PF01193) | ||||
| 655813.SMSK23_0648 | + | (ER) | |||
| 655813.HMPREF8579_1637 | (PF02875) (PF08245) | ||||
| 655813.SMSK23_1452 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_0580 | (PF00156) | (mitochondrial) | |||
| 655813.HMPREF8579_0345 | (PF00318) | (mitochondrial) | |||
| 655813.HMPREF8579_0344 | + | (PF00889) | |||
| 655813.HMPREF8579_0169 | (PF00133) (PF13603) | ||||
| 655813.HMPREF8579_0015 | + | (PF05066) | |||
| 655813.HMPREF8579_0014 | (PF06418) | (mitochondrial) | |||
| 655813.HMPREF8579_0373 | (PF06071) (PF01926) | ||||
| 655813.SMSK23_0891 | (PF08544) (PF00288) | ||||
| 655813.SMSK23_0890 | (PF08544) (PF00288) | ||||
| 655813.SMSK23_0892 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_1750 | (PF08713) | (plastid) | |||
| 655813.SMSK23_1306 | (PF13793) (PF14572) | ||||
| 655813.HMPREF8579_0571 | (PF13331) (PF13662) | ||||
| 655813.HMPREF8579_0156 | + | (ER) | |||
| 655813.SMSK23_0823 | + | (mitochondrial) | |||
| 655813.SMSK23_0790 | (PF02875) (PF08245) | ||||
| 655813.HMPREF8579_0911 | + | (PF03462) | |||
| 655813.SMSK23_0234 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_1152 | (PF01048) | (ER) | |||
| 655813.HMPREF8579_0554 | (PF02875) (PF08245) | ||||
| 655813.SMSK23_1408 | (PF01649) | (mitochondrial) | |||
| 655813.SMSK23_0689 | (PF01336) (PF02938) | ||||
| 655813.HMPREF8579_0940 | (PF00204) (PF00986) | ||||
| 655813.HMPREF8579_1124 | (PF02881) (PF02978) | ||||
| 655813.HMPREF8579_0610 | + | PF00572 | |||
| 655813.SMSK23_0704 | + | (mitochondrial) | |||
| 655813.SMSK23_0327 | + | (PF05066) | |||
| 655813.SMSK23_0328 | (PF06418) | (mitochondrial) | |||
| 655813.SMSK23_1347 | (PF14622) | (ER) | |||
| 655813.HMPREF8579_0448 | (PF02844) (PF02843) | ||||
| 655813.HMPREF8579_0199 | (PF03947) (PF00181) | ||||
| 655813.HMPREF8579_0190 | PF00673 PF00281 | ||||
| 655813.HMPREF8579_0196 | PF00189 (PF07650) | ||||
| 655813.SMSK23_1647 | (PF02881) (PF02978) | ||||
| 655813.HMPREF8579_1824 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_1726 | (PF02875) (PF08245) | ||||
| 655813.HMPREF8579_1456 | (PF00204) (PF00986) | ||||
| 655813.HMPREF8579_1107 | (PF01926) (PF01018) | ||||
| 655813.HMPREF8579_1451 | (PF00521) (PF03989) | ||||
| 655813.HMPREF8579_0185 | PF03719 PF00333 | ||||
| 655813.HMPREF8579_0183 | + | PF00828 | |||
| 655813.SMSK23_1630 | (PF01926) (PF01018) | ||||
| 655813.SMSK23_1183 | (PF01715) | (mitochondrial) | |||
| 655813.SMSK23_0762 | (PF06071) (PF01926) | ||||
| 655813.HMPREF8579_0521 | + | (mitochondrial) | |||
| 655813.SMSK23_1362 | (PF03144) (PF06421) | ||||
| 655813.SMSK23_1160 | (PF02875) (PF08245) | ||||
| 655813.HMPREF8579_1207 | (PF02517) | (ER) | |||
| 655813.SMSK23_1289 | + | (PF16326) | |||
| 655813.SMSK23_0805 | (PF13331) (PF13662) | ||||
| 655813.SMSK23_1373 | (PF00521) (PF03989) | ||||
| 655813.SMSK23_0627 | (PF02844) (PF02843) | ||||
| 655813.HMPREF8579_0504 | (PF01336) (PF02938) | ||||
| 655813.HMPREF8579_0891 | PF03083 | (ER) | |||
| 655813.HMPREF8579_0653 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_0655 | (PF08544) (PF00288) | ||||
| 655813.HMPREF8579_0654 | (PF08544) (PF00288) | ||||
| 655813.SMSK23_0814 | (PF00156) | (mitochondrial) | |||
| 655813.SMSK23_0141 | (PF02875) (PF08245) | ||||
| 655813.SMSK23_1779 | + | (mitochondrial) | |||
| 655813.SMSK23_0554 | (PF05167) | ||||
| 655813.SMSK23_1556 | (PF13177) | ||||
| 655813.SMSK23_1551 | (PF01479) | ||||
| 655813.SMSK23_0826 | (PF00275) | ||||
| 655813.SMSK23_0822 | (PF03590) | ||||
| 655813.SMSK23_0734 | (PF00318) | ||||
| 655813.SMSK23_0739 | + | ||||
| 655813.SMSK23_1159 | + | ||||
| 655813.SMSK23_0607 | + | ||||
| 655813.HMPREF8579_1676 | (PF13735) | ||||
| 655813.HMPREF8579_1079 | + | ||||
| 655813.HMPREF8579_1075 | (PF01048) | ||||
| 655813.HMPREF8579_1077 | (PF01048) | ||||
| 655813.HMPREF8579_1526 | (PF00275) | ||||
| 655813.HMPREF8579_1520 | PF04991 | ||||
| 655813.SMSK23_1251 | + | ||||
| 655813.HMPREF8579_0996 | + | ||||
| 655813.HMPREF8579_0871 | + | ||||
| 655813.SMSK23_0541 | PF00861 | ||||
| 655813.SMSK23_0540 | PF00347 | ||||
| 655813.SMSK23_0548 | PF00416 | ||||
| 655813.SMSK23_0949 | PF00344 | ||||
| 655813.SMSK23_0947 | (PF01501) | ||||
| 655813.SMSK23_0944 | (PF03144) | ||||
| 655813.SMSK23_0723 | (PF05257) | ||||
| 655813.SMSK23_1121 | (PF13735) | ||||
| 655813.HMPREF8579_1791 | + | ||||
| 655813.HMPREF8579_1663 | (PF01336) | ||||
| 655813.HMPREF8579_1662 | (PF01250) | ||||
| 655813.SMSK23_1238 | (PF01926) | ||||
| 655813.HMPREF8579_1084 | (PF01121) | ||||
| 655813.HMPREF8579_1080 | (PF02130) | ||||
| 655813.HMPREF8579_1088 | (PF01668) | ||||
| 655813.HMPREF8579_1401 | (PF14622) | ||||
| 655813.SMSK23_0052 | (PF08282) | ||||
| 655813.HMPREF8579_0745 | (PF00368) | ||||
| 655813.HMPREF8579_0210 | (PF03477) | ||||
| 655813.HMPREF8579_0217 | (PF03652) | ||||
| 655813.HMPREF8579_0216 | + | ||||
| 655813.HMPREF8579_0339 | (PF00156) | ||||
| 655813.HMPREF8579_0215 | (PF08245) | ||||
| 655813.HMPREF8579_0332 | (PF05257) | ||||
| 655813.HMPREF8579_0680 | (PF02403) | ||||
| 655813.HMPREF8579_0683 | + | ||||
| 655813.HMPREF8579_0114 | (PF03144) | ||||
| 655813.HMPREF8579_0115 | PF00177 | ||||
| 655813.HMPREF8579_0116 | (PF00164) | ||||
| 655813.HMPREF8579_0205 | (PF00485) | ||||
| 655813.HMPREF8579_0200 | PF00276 | ||||
| 655813.SMSK23_1719 | (PF01926) | ||||
| 655813.SMSK23_1004 | (PF01048) | ||||
| 655813.SMSK23_0536 | (PF17136) | ||||
| 655813.SMSK23_0534 | PF00366 | ||||
| 655813.SMSK23_0535 | PF00238 | ||||
| 655813.SMSK23_0533 | (PF00831) | ||||
| 655813.SMSK23_0530 | (PF00237) | ||||
| 655813.SMSK23_0539 | PF00410 | ||||
| 655813.SMSK23_0994 | + | ||||
| 655813.SMSK23_0286 | (PF00162) | ||||
| 655813.SMSK23_0846 | PF00380 | ||||
| 655813.SMSK23_1135 | (PF01250) | ||||
| 655813.SMSK23_1134 | (PF01336) | ||||
| 655813.SMSK23_0664 | (PF01048) | ||||
| 655813.HMPREF8579_1653 | (PF08282) | ||||
| 655813.SMSK23_0573 | + | ||||
| 655813.SMSK23_1229 | (PF08282) | ||||
| 655813.SMSK23_0269 | + | ||||
| 655813.HMPREF8579_0695 | + | ||||
| 655813.HMPREF8579_1501 | (PF01180) | ||||
| 655813.HMPREF8579_1504 | + | ||||
| 655813.HMPREF8579_1507 | (PF16320) | ||||
| 655813.HMPREF8579_1508 | (PF00466) | ||||
| 655813.HMPREF8579_0211 | + | ||||
| 655813.HMPREF8579_0218 | + | ||||
| 655813.SMSK23_1722 | (PF03462) | ||||
| 655813.SMSK23_1037 | (PF01368) | ||||
| 655813.SMSK23_0525 | PF00297 | ||||
| 655813.SMSK23_0527 | PF00276 | ||||
| 655813.SMSK23_0522 | (PF00485) | ||||
| 655813.SMSK23_1105 | (PF02224) | ||||
| 655813.SMSK23_0986 | (PF00368) | ||||
| 655813.SMSK23_0985 | (PF00368) | ||||
| 655813.SMSK23_0856 | + | ||||
| 655813.HMPREF8579_1649 | (PF01368) | ||||
| 655813.HMPREF8579_1425 | (PF00485) | ||||
| 655813.HMPREF8579_0592 | (PF00275) | ||||
| 655813.HMPREF8579_0351 | + | ||||
| 655813.HMPREF8579_0179 | PF00416 | ||||
| 655813.HMPREF8579_0174 | (PF05167) | ||||
| 655813.HMPREF8579_0004 | (PF02677) | ||||
| 655813.HMPREF8579_0001 | (PF05958) | ||||
| 655813.SMSK23_1731 | (PF05958) | ||||
| 655813.SMSK23_0510 | (PF03652) | ||||
| 655813.SMSK23_0511 | + | ||||
| 655813.SMSK23_0512 | (PF08245) | ||||
| 655813.SMSK23_0516 | + | ||||
| 655813.SMSK23_0517 | (PF03477) | ||||
| 655813.SMSK23_0529 | (PF00203) | ||||
| 655813.HMPREF8579_1050 | (PF00707) | ||||
| 655813.HMPREF8579_1198 | (PF03462) | ||||
| 655813.SMSK23_1445 | (PF16320) | ||||
| 655813.SMSK23_1446 | (PF00466) | ||||
| 655813.SMSK23_1596 | (PF01048) | ||||
| 655813.SMSK23_1598 | (PF01048) | ||||
| 655813.SMSK23_0642 | (PF01791) | ||||
| 655813.HMPREF8579_1638 | + | ||||
| 655813.SMSK23_0085 | (PF08002) | ||||
| 655813.HMPREF8579_1169 | (PF01791) | ||||
| 655813.HMPREF8579_0587 | (PF03590) | ||||
| 655813.HMPREF8579_1291 | (PF01926) | ||||
| 655813.HMPREF8579_1292 | (PF01351) | ||||
| 655813.HMPREF8579_0165 | (PF06042) | ||||
| 655813.HMPREF8579_0166 | (PF05491) | ||||
| 655813.HMPREF8579_1366 | (PF04127) | ||||
| 655813.HMPREF8579_0764 | (PF01048) | ||||
| 655813.HMPREF8579_0575 | + | ||||
| 655813.HMPREF8579_0010 | (PF01588) | ||||
| 655813.HMPREF8579_0018 | (PF00133) | ||||
| 655813.HMPREF8579_0804 | (PF08459) | ||||
| 655813.SMSK23_1691 | (PF01791) | ||||
| 655813.SMSK23_1109 | (PF01926) | ||||
| 655813.SMSK23_1476 | (PF02873) | ||||
| 655813.SMSK23_1470 | (PF09154) | ||||
| 655813.SMSK23_1478 | (PF03306) | ||||
| 655813.SMSK23_0472 | (PF00814) | ||||
| 655813.SMSK23_0470 | (PF00814) | ||||
| 655813.SMSK23_0879 | (PF07555) | ||||
| 655813.SMSK23_0899 | + | ||||
| 655813.HMPREF8579_0710 | (PF01501) | ||||
| 655813.HMPREF8579_0711 | PF00344 | ||||
| 655813.HMPREF8579_0976 | + | ||||
| 655813.HMPREF8579_1759 | (PF03477) | ||||
| 655813.SMSK23_0258 | (PF01795) | ||||
| 655813.SMSK23_1307 | + | ||||
| 655813.HMPREF8579_1195 | (PF01926) | ||||
| 655813.HMPREF8579_0480 | (PF01048) | ||||
| 655813.HMPREF8579_1283 | (PF08282) | ||||
| 655813.HMPREF8579_0374 | (PF01195) | ||||
| 655813.HMPREF8579_0392 | + | ||||
| 655813.HMPREF8579_1378 | (PF12344) | ||||
| 655813.HMPREF8579_0028 | (PF02033) | ||||
| 655813.HMPREF8579_0029 | (PF11987) | ||||
| 655813.HMPREF8579_0621 | + | ||||
| 655813.HMPREF8579_1722 | + | ||||
| 655813.HMPREF8579_0518 | + | ||||
| 655813.HMPREF8579_1498 | + | ||||
| 655813.SMSK23_1681 | (PF01633) | ||||
| 655813.SMSK23_1042 | (PF08459) | ||||
| 655813.SMSK23_1463 | (PF00275) | ||||
| 655813.HMPREF8579_1051 | (PF01632) | ||||
| 655813.SMSK23_0313 | (PF11987) | ||||
| 655813.SMSK23_0310 | (PF13184) | ||||
| 655813.SMSK23_0314 | (PF02033) | ||||
| 655813.SMSK23_0932 | + | ||||
| 655813.SMSK23_0796 | (PF08282) | ||||
| 655813.HMPREF8579_1589 | (PF05257) | ||||
| 655813.HMPREF8579_1612 | (PF01926) | ||||
| 655813.HMPREF8579_1613 | (PF01715) | ||||
| 655813.HMPREF8579_0969 | (PF08282) | ||||
| 655813.SMSK23_0948 | (PF01501) | ||||
| 655813.SMSK23_1316 | (PF04127) | ||||
| 655813.SMSK23_0227 | (PF00156) | ||||
| 655813.HMPREF8579_1144 | (PF01336) | ||||
| 655813.HMPREF8579_0561 | (PF08282) | ||||
| 655813.SMSK23_0132 | (PF00133) | ||||
| 655813.HMPREF8579_0369 | + | ||||
| 655813.HMPREF8579_1543 | (PF03306) | ||||
| 655813.SMSK23_0138 | + | ||||
| 655813.HMPREF8579_0387 | (PF00584) | not used | |||
| 655813.HMPREF8579_0381 | (PF00156) | ||||
| 655813.HMPREF8579_0383 | (PF05958) | ||||
| 655813.HMPREF8579_0709 | (PF01501) | ||||
| 655813.HMPREF8579_1384 | (PF08282) | ||||
| 655813.HMPREF8579_1382 | (PF02881) | ||||
| 655813.HMPREF8579_1383 | (PF08282) | ||||
| 655813.HMPREF8579_0707 | (PF03144) | ||||
| 655813.HMPREF8579_0033 | (PF02576) | ||||
| 655813.HMPREF8579_0032 | (PF13184) | ||||
| 655813.HMPREF8579_0142 | (PF02367) | ||||
| 655813.SMSK23_1673 | (PF01048) | ||||
| 655813.SMSK23_1416 | (PF01588) | ||||
| 655813.HMPREF8579_1817 | (PF00156) | ||||
| 655813.SMSK23_0309 | (PF02576) | ||||
| 655813.SMSK23_1521 | (PF01368) | ||||
| 655813.SMSK23_1526 | (PF01245) | ||||
| 655813.SMSK23_0786 | (PF08282) | ||||
| 655813.SMSK23_0781 | + | ||||
| 655813.SMSK23_0780 | (PF01479) | ||||
| 655813.SMSK23_1092 | (PF03596) | ||||
| 655813.SMSK23_0204 | + | ||||
| 655813.SMSK23_1326 | (PF12344) | ||||
| 655813.HMPREF8579_1159 | (PF01633) | ||||
| 655813.HMPREF8579_0550 | (PF08282) | ||||
| 655813.HMPREF8579_0828 | (PF00156) | ||||
| 655813.SMSK23_0124 | PF00312 | ||||
| 655813.HMPREF8579_0826 | PF00687 | ||||
| 655813.HMPREF8579_1399 | (PF01687) | ||||
| 655813.HMPREF8579_1397 | + | ||||
| 655813.HMPREF8579_0736 | (PF01192) | ||||
| 655813.SMSK23_1666 | (PF01336) | ||||
| 655813.SMSK23_1064 | (PF00156) | ||||
| 655813.SMSK23_1062 | PF00687 | ||||
| 655813.SMSK23_1436 | + | ||||
| 655813.SMSK23_1407 | (PF00485) | ||||
| 655813.SMSK23_1402 | (PF01791) | ||||
| 655813.SMSK23_0339 | (PF02677) | ||||
| 655813.SMSK23_1240 | (PF01351) | ||||
| 655813.SMSK23_1539 | (PF08282) | ||||
| 655813.SMSK23_0333 | (PF01588) | ||||
| 655813.SMSK23_1089 | + | ||||
| 655813.HMPREF8579_1494 | (PF17032) | ||||
| 655813.SMSK23_0758 | + | ||||
| 655813.HMPREF8579_1706 | (PF03596) | ||||
| 655813.HMPREF8579_1707 | PF00312 | ||||
| 655813.SMSK23_1331 | (PF08282) | ||||
| 655813.SMSK23_1330 | (PF02881) | ||||
| 655813.HMPREF8579_1122 | (PF03144) | ||||
| 655813.HMPREF8579_1125 | (PF00958) | ||||
| 655813.HMPREF8579_0545 | + | ||||
| 655813.SMSK23_0115 | (PF03144) | ||||
| 655813.HMPREF8579_0544 | (PF01479) | ||||
| 655813.HMPREF8579_0428 | + | ||||
| 655813.SMSK23_0058 | + | ||||
| 655813.HMPREF8579_1238 | + | not used | |||
| 655813.HMPREF8579_0725 | (PF01926) | ||||
| 655813.HMPREF8579_0729 | (PF02410) | ||||
| 655813.HMPREF8579_0931 | (PF08282) | ||||
| 655813.HMPREF8579_0059 | (PF03644) | ||||
| 655813.HMPREF8579_0056 | (PF00162) | ||||
| 655813.HMPREF8579_0611 | PF00380 | ||||
| 655813.HMPREF8579_1534 | (PF09154) | ||||
| 655813.SMSK23_1432 | (PF17032) | ||||
| 655813.SMSK23_1439 | (PF01180) | ||||
| 655813.SMSK23_0434 | (PF06824) | ||||
| 655813.SMSK23_1507 | (PF02527) | ||||
| 655813.SMSK23_0324 | (PF00133) | ||||
| 655813.HMPREF8579_1484 | (PF02229) | ||||
| 655813.HMPREF8579_1486 | (PF03477) | ||||
| 655813.HMPREF8579_1488 | (PF01782) | ||||
| 655813.SMSK23_0691 | PF13207 | ||||
| 655813.HMPREF8579_1715 | (PF00133) | ||||
| 655813.SMSK23_1345 | (PF01687) | ||||
| 655813.SMSK23_1343 | + | ||||
| 655813.HMPREF8579_1006 | (PF01245) | ||||
| 655813.HMPREF8579_1001 | (PF01368) | ||||
| 655813.SMSK23_0108 | (PF00156) | ||||
| 655813.HMPREF8579_0992 | (PF02620) | ||||
| 655813.HMPREF8579_0994 | (PF00156) | ||||
| 655813.HMPREF8579_0444 | (PF00156) | ||||
| 655813.HMPREF8579_0443 | (PF13507) | ||||
| 655813.HMPREF8579_0286 | (PF12368) | ||||
| 655813.HMPREF8579_0198 | (PF00203) | ||||
| 655813.HMPREF8579_0669 | (PF08713) | ||||
| 655813.HMPREF8579_0202 | PF00297 | ||||
| 655813.HMPREF8579_0191 | (PF17136) | ||||
| 655813.HMPREF8579_0192 | PF00238 | ||||
| 655813.HMPREF8579_0193 | PF00366 | ||||
| 655813.HMPREF8579_0194 | (PF00831) | ||||
| 655813.HMPREF8579_0197 | (PF00237) | ||||
| 655813.SMSK23_1643 | + | ||||
| 655813.SMSK23_1645 | (PF03144) | ||||
| 655813.SMSK23_1648 | (PF00958) | ||||
| 655813.SMSK23_1427 | (PF01782) | ||||
| 655813.SMSK23_1426 | (PF01746) | ||||
| 655813.SMSK23_1425 | (PF03477) | ||||
| 655813.SMSK23_1423 | (PF02229) | ||||
| 655813.SMSK23_0917 | (PF02403) | ||||
| 655813.SMSK23_0910 | (PF01351) | ||||
| 655813.SMSK23_1512 | (PF02620) | ||||
| 655813.SMSK23_1516 | + | ||||
| 655813.SMSK23_1514 | (PF00156) | ||||
| 655813.SMSK23_0350 | PF00177 | ||||
| 655813.SMSK23_0351 | (PF03144) | ||||
| 655813.SMSK23_0770 | (PF00156) | ||||
| 655813.SMSK23_0772 | (PF05958) | ||||
| 655813.HMPREF8579_1728 | (PF13662) | ||||
| 655813.HMPREF8579_0855 | + | ||||
| 655813.SMSK23_1442 | + | ||||
| 655813.HMPREF8579_1031 | (PF01479) | ||||
| 655813.HMPREF8579_1036 | (PF13177) | ||||
| 655813.HMPREF8579_0520 | (PF01479) | ||||
| 655813.SMSK23_0174 | (PF03477) | ||||
| 655813.HMPREF8579_1586 | + | ||||
| 655813.HMPREF8579_1100 | (PF13155) | ||||
| 655813.HMPREF8579_0987 | (PF02527) | ||||
| 655813.HMPREF8579_0296 | (PF06824) | ||||
| 655813.SMSK23_0133 | + | ||||
| 655813.HMPREF8579_0670 | (PF05697) | ||||
| 655813.HMPREF8579_0673 | (PF01351) | ||||
| 655813.HMPREF8579_0187 | PF00347 | ||||
| 655813.HMPREF8579_0186 | PF00861 | ||||
| 655813.HMPREF8579_0184 | (PF00327) | ||||
| 655813.HMPREF8579_0188 | PF00410 | ||||
| 655813.SMSK23_0135 | (PF01479) | ||||
| 655813.HMPREF8579_0075 | + | ||||
| 655813.HMPREF8579_0074 | + | ||||
| 655813.SMSK23_1637 | (PF00275) | ||||
| 655813.SMSK23_1634 | (PF01336) | ||||
| 655813.SMSK23_1184 | (PF01926) | ||||
| 655813.SMSK23_0763 | (PF01195) | ||||
| 655813.SMSK23_0586 | (PF02367) | ||||
| 655813.SMSK23_1561 | (PF01765) | ||||
| 655813.SMSK23_0349 | (PF00164) | ||||
| 655813.SMSK23_0907 | (PF05697) | ||||
| 655813.SMSK23_0906 | (PF08713) | ||||
| 655813.SMSK23_1368 | (PF00485) | ||||
| 655813.HMPREF8579_1593 | + | ||||
| 655813.HMPREF8579_0867 | (PF03144) | ||||
| 655813.HMPREF8579_1026 | (PF00829) | ||||
| 655813.SMSK23_0168 | + | ||||
| 655813.HMPREF8579_1020 | (PF08282) | ||||
| 655813.SMSK23_0166 | (PF08713) | ||||
| 655813.HMPREF8579_1206 | (PF05958) | ||||
| 655813.HMPREF8579_0468 | + | ||||
| 655813.HMPREF8579_1111 | (PF01336) | ||||
| 655813.HMPREF8579_1114 | (PF00275) | ||||
| 655813.HMPREF8579_0462 | (PF01791) | ||||
| 655813.SMSK23_0011 | + | ||||
| 655813.SMSK23_0018 | (PF08282) | ||||
| 655813.HMPREF8579_0642 | (PF07555) | ||||
| 655813.HMPREF8579_0084 | (PF01795) | ||||
| 655813.SMSK23_1622 | (PF13155) | ||||
| 655813.SMSK23_1579 | + | ||||
| 655813.SMSK23_1577 | (PF01180) | ||||
| 655813.SMSK23_1571 | (PF01632) | ||||
| 655813.SMSK23_1570 | (PF00707) | ||||
| 655813.SMSK23_0379 | + | ||||
| 655813.SMSK23_0809 | + | ||||
| 655813.SMSK23_0920 | + | ||||
| 655813.SMSK23_0375 | (PF00584) | not used | |||
| 655813.SMSK23_0976 | (PF01192) | ||||
| 655813.SMSK23_0974 | (PF00013) | ||||
| 655813.SMSK23_0111 | + | ||||
| 655813.SMSK23_0622 | (PF13507) | ||||
| 655813.SMSK23_0623 | (PF00156) | ||||
| 655813.HMPREF8579_0873 | (PF00156) | ||||
| 655813.HMPREF8579_1692 | (PF02224) | ||||
| 655813.HMPREF8579_1057 | (PF01180) | ||||
| 655813.HMPREF8579_0506 | PF13207 | ||||
| 655813.HMPREF8579_1304 | + | ||||
| 655813.HMPREF8579_0259 | (PF00814) | ||||
| 655813.HMPREF8579_0257 | (PF00814) | ||||
| 655813.HMPREF8579_0897 | (PF08002) | ||||
| 655813.SMSK23_1610 | (PF01668) | ||||
| 655813.SMSK23_0563 | (PF06042) | ||||
| 655813.SMSK23_0562 | (PF05491) | ||||
| 655813.SMSK23_1545 | (PF00829) | ||||
| 655813.SMSK23_1547 | (PF01016) | ||||
| 655813.SMSK23_0964 | (PF01926) | ||||
| 655813.SMSK23_0968 | (PF02410) | ||||
| 655813.SMSK23_0703 | (PF01479) | ||||
| 655813.SMSK23_1147 | (PF01368) | ||||
| 655813.SMSK23_0499 | PF03083 | ||||
| 655813.SMSK23_1143 | (PF08282) | ||||
| 655813.SMSK23_0143 | (PF13662) | ||||
| 655813.HMPREF8579_1688 | (PF01926) | ||||
| 655813.HMPREF8579_1041 | (PF01765) | ||||
| 655813.HMPREF8579_0799 | (PF01368) | ||||
| 655813.HMPREF8579_1467 | (PF00485) | ||||
| 655813.HMPREF8579_1463 | (PF01791) | ||||
| 655813.HMPREF8579_0229 | PF03083 | ||||
| 655813.HMPREF8579_0310 | (PF00230) | ||||
| 655813.SMSK23_0270 | + | ||||
| 655813.HMPREF8579_0133 | PF04103 | ||||
| 655813.HMPREF8579_1716 | + | ||||
| 655813.HMPREF8579_1718 | (PF01479) | ||||
| 655813.SMSK23_1605 | (PF01121) | ||||
| 655813.SMSK23_1601 | (PF02130) | ||||
| 655813.SMSK23_1600 | + | ||||
| 655813.HMPREF8579_1541 | (PF02873) | ||||
| 655813.SMSK23_1772 | + | ||||
| 655813.SMSK23_1776 | (PF05257) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- T4SEpre bpbAac predictions (T4SEpre_bpbAac_FinalResult.csv)
- T4SEpre psAac predictions (T4SEpre_psAac_FinalResult.csv)
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)
Genome based results
Summary
- Gram negative: NO (FDR = 0.5 %)
- Functional Type III secretion system: N.D.
- Functional Type IV secretion system: YES (FDR = 7.2 %)
Estimated copy number = 0 (0/0 KEGG proteins)
- Functional Type VI secretion system: N.D.
Individual results for each secretion system
Parameters:
==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================
Estimated copy number = 0 (0/0 KEGG proteins)
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
