Effective results for Pseudomonas fluorescens WH6 (eggnog40)

Summary

Number of putative secreted proteins: 812
- Predicted by EffectiveT3: 255 (high confidence), 375 (low confidence)
- Predicted by EffectiveCCBD: 20 within, 14 before, 40 behind expected region 25..70aa
- Predicted by T4SEpre: 106
- Predicted by EffectiveELD: 20 eukaryotic-like domains, contained in 61 proteins (2 high, 59 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type III, (Type IV), Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
746360.PFWH6_2638(PF14686) (PF09284) (PF14683)ER
746360.PFWH6_2511++ER
746360.PFWH6_4702++ER
746360.PFWH6_2773+ER
746360.PFWH6_4244(>)(mitochondrial); mitochondrial
746360.PFWH6_1685(>)ER
746360.PFWH6_3791(PF02366)ER
746360.PFWH6_2225(>)mitochondrial; (mitochondrial)
746360.PFWH6_3507+(mitochondrial); plastid
746360.PFWH6_1238+ER
746360.PFWH6_2677+ER
746360.PFWH6_1557(>)ER
746360.PFWH6_0979+(ER); (plastid)
746360.PFWH6_0766+ER
746360.PFWH6_0502(PF06293)ER
746360.PFWH6_3503(PF00199)ER
746360.PFWH6_4418+ER
746360.PFWH6_2244(<)ER
746360.PFWH6_1299+ER
746360.PFWH6_0521+mitochondrial
746360.PFWH6_5565+ER
746360.PFWH6_4167(>)ER
746360.PFWH6_5041+(ER)
746360.PFWH6_5718+ER
746360.PFWH6_0092(<)ER
746360.PFWH6_3012+ER
746360.PFWH6_3900+ER
746360.PFWH6_3221+(mitochondrial)
746360.PFWH6_0876+ER
746360.PFWH6_5340+ER
746360.PFWH6_2597+ER
746360.PFWH6_0839+(mitochondrial); (plastid)
746360.PFWH6_5308+(mitochondrial); plastid
746360.PFWH6_1825+ER
746360.PFWH6_5670(PF14539)mitochondrial; (mitochondrial)
746360.PFWH6_3845+ER
746360.PFWH6_0067+ER
746360.PFWH6_0386+(mitochondrial)
746360.PFWH6_2742+mitochondrial; (mitochondrial)
746360.PFWH6_5166+(mitochondrial); plastid
746360.PFWH6_1162(>)(mitochondrial)
746360.PFWH6_3108+ER
746360.PFWH6_1882(<)ER
746360.PFWH6_2765(PF02366)ER
746360.PFWH6_5232+mitochondrial
746360.PFWH6_5230+ER
746360.PFWH6_3375(PF06884)ER
746360.PFWH6_3169+mitochondrial; (mitochondrial)
746360.PFWH6_0710+ER
746360.PFWH6_3788(PF02366)ER
746360.PFWH6_4925+ER; (ER)
746360.PFWH6_1205(PF00182)mitochondrial; plastid
746360.PFWH6_0556+(mitochondrial)
746360.PFWH6_2958+ER
746360.PFWH6_0948+ER
746360.PFWH6_1978+mitochondrial
746360.PFWH6_1793+ER; (ER)
746360.PFWH6_0518(>)ER; (ER)
746360.PFWH6_2002(>)ER
746360.PFWH6_0230+ER
746360.PFWH6_2279(PF05189)(mitochondrial)
746360.PFWH6_3518+(mitochondrial)
746360.PFWH6_3043+ER
746360.PFWH6_3703+ER
746360.PFWH6_1934(>)(mitochondrial)
746360.PFWH6_2409+(ER); (mitochondrial)
746360.PFWH6_3725+ER
746360.PFWH6_4353(>)ER
746360.PFWH6_1864(PF00199)ER
746360.PFWH6_0848+(mitochondrial)
746360.PFWH6_4676+ER; (ER)
746360.PFWH6_4695(<)ER
746360.PFWH6_2330+ER
746360.PFWH6_2594(PF06945)(mitochondrial); mitochondrial
746360.PFWH6_5649(>)ER
746360.PFWH6_1486+(ER)
746360.PFWH6_2867(>)(ER)
746360.PFWH6_2534(>)(mitochondrial)
746360.PFWH6_2807(PF00199)ER
746360.PFWH6_2827+(mitochondrial)
746360.PFWH6_2752+ER
746360.PFWH6_5082(PF00199)(ER)
746360.PFWH6_3367+(PF10685)not used
746360.PFWH6_3366(+)+(PF10685)
746360.PFWH6_1538(+)(mitochondrial); (plastid)
746360.PFWH6_4472+(PF02133)
746360.PFWH6_3173+(PF01400)
746360.PFWH6_3171+plastid
746360.PFWH6_2559+(ER)
746360.PFWH6_1942+(plastid)
746360.PFWH6_3329(+)(mitochondrial)
746360.PFWH6_5499(+)(ER)
746360.PFWH6_2482+plastid
746360.PFWH6_5936(+)mitochondrial
746360.PFWH6_4035(+)ER
746360.PFWH6_3508(+)mitochondrial
746360.PFWH6_5730+(PF06945)
746360.PFWH6_2391(+)(mitochondrial); (plastid)
746360.PFWH6_2381(+)mitochondrial; (mitochondrial)
746360.PFWH6_0550++
746360.PFWH6_3906+(ER)
746360.PFWH6_4363(+)ER
746360.PFWH6_1622(+)ER
746360.PFWH6_3227+(plastid)
746360.PFWH6_0879(<)+
746360.PFWH6_3033+(ER)
746360.PFWH6_3692+plastid
746360.PFWH6_5830(+)(ER)
746360.PFWH6_5833+(plastid)
746360.PFWH6_1187(+)ER
746360.PFWH6_0300+(plastid)
746360.PFWH6_0302(+)(mitochondrial)
746360.PFWH6_4309+(mitochondrial)
746360.PFWH6_2117+(mitochondrial)
746360.PFWH6_4512+plastid
746360.PFWH6_5584++
746360.PFWH6_1225+(plastid)
746360.PFWH6_3848(PF01400)(plastid)
746360.PFWH6_4709(+)(mitochondrial); (plastid)
746360.PFWH6_5691+(ER)
746360.PFWH6_1105++
746360.PFWH6_5135+(mitochondrial)
746360.PFWH6_1109+(plastid)
746360.PFWH6_5178++
746360.PFWH6_3105+(ER)
746360.PFWH6_2509(+)ER; (ER)
746360.PFWH6_0693(+)(mitochondrial); plastid
746360.PFWH6_1260+(>)
746360.PFWH6_2979(PF14539)(plastid)
746360.PFWH6_1522(>)(ER)
746360.PFWH6_5785+(mitochondrial)
746360.PFWH6_2556(+)(ER); ER
746360.PFWH6_4076(PF14539)(plastid)
746360.PFWH6_3312(+)mitochondrial; (mitochondrial)
746360.PFWH6_1044++
746360.PFWH6_1045+(plastid)
746360.PFWH6_1567(>)(PF06293)
746360.PFWH6_4424+(PF02133)
746360.PFWH6_0212+(plastid)
746360.PFWH6_2009+plastid
746360.PFWH6_0003(+)(mitochondrial)
746360.PFWH6_0542++
746360.PFWH6_3215(+)ER
746360.PFWH6_3006+(ER)
746360.PFWH6_3008(+)ER
746360.PFWH6_2358+(plastid)
746360.PFWH6_4355+(plastid)
746360.PFWH6_1644(+)(mitochondrial)
746360.PFWH6_3335(PF02366)plastid
746360.PFWH6_0751+(PF03692)
746360.PFWH6_3020(+)ER
746360.PFWH6_4205+plastid
746360.PFWH6_4204(+)+(plastid)
746360.PFWH6_5264+(PF00199)
746360.PFWH6_1445(+)(mitochondrial); plastid
746360.PFWH6_4678+(>)
746360.PFWH6_5803(+)+(plastid)
746360.PFWH6_3754(>)+
746360.PFWH6_0394+(mitochondrial)
746360.PFWH6_1745+(mitochondrial)
746360.PFWH6_1170(+)(mitochondrial)
746360.PFWH6_3600(+)mitochondrial
746360.PFWH6_1843+
746360.PFWH6_0824+
746360.PFWH6_2666+
746360.PFWH6_4493+
746360.PFWH6_5168+
746360.PFWH6_4567+
746360.PFWH6_3132+
746360.PFWH6_3646+
746360.PFWH6_2514+
746360.PFWH6_1092(+)(plastid)
746360.PFWH6_2771+
746360.PFWH6_2777+
746360.PFWH6_4915(<)
746360.PFWH6_4913(+)(<)
746360.PFWH6_5209+
746360.PFWH6_5154+
746360.PFWH6_3123+
746360.PFWH6_3124+
746360.PFWH6_0053+
746360.PFWH6_4881(>)
746360.PFWH6_3832+
746360.PFWH6_3345(>)
746360.PFWH6_3365(+)(plastid)
746360.PFWH6_3362+
746360.PFWH6_3360+
746360.PFWH6_2987+
746360.PFWH6_0506+
746360.PFWH6_0605+
746360.PFWH6_1515+
746360.PFWH6_4151+
746360.PFWH6_3115(+)plastid
746360.PFWH6_2575+not used
746360.PFWH6_2571+
746360.PFWH6_1072(+)(plastid)
746360.PFWH6_4245(+)(plastid)
746360.PFWH6_4068+
746360.PFWH6_2133+
746360.PFWH6_1687+
746360.PFWH6_1534(+)(ER)
746360.PFWH6_0486(+)(plastid)
746360.PFWH6_3178+
746360.PFWH6_4037+
746360.PFWH6_5029(+)ER; not used
746360.PFWH6_1059(PF05971)
746360.PFWH6_5244(+)+
746360.PFWH6_1943+
746360.PFWH6_1944+
746360.PFWH6_0832+
746360.PFWH6_2903+
746360.PFWH6_2941+
746360.PFWH6_2948(<)
746360.PFWH6_2949+
746360.PFWH6_3327(+)+
746360.PFWH6_3150+
746360.PFWH6_4894+
746360.PFWH6_3824+
746360.PFWH6_3825+
746360.PFWH6_3354+
746360.PFWH6_2075+
746360.PFWH6_0993+
746360.PFWH6_0190+
746360.PFWH6_0220+
746360.PFWH6_0228+
746360.PFWH6_4096(PF03538)
746360.PFWH6_2267+
746360.PFWH6_5067(+)(ER)
746360.PFWH6_1018+
746360.PFWH6_5069+
746360.PFWH6_4888+not used
746360.PFWH6_4084+
746360.PFWH6_0500(PF06293)
746360.PFWH6_0501(PF06293)
746360.PFWH6_5204+
746360.PFWH6_5205+
746360.PFWH6_4146+
746360.PFWH6_0526(>)
746360.PFWH6_0523(PF02133)
746360.PFWH6_3923+
746360.PFWH6_3922+
746360.PFWH6_3929+
746360.PFWH6_2038(PF02133)
746360.PFWH6_4389+
746360.PFWH6_4163+
746360.PFWH6_0266+
746360.PFWH6_3719(PF02133)
746360.PFWH6_2025+
746360.PFWH6_1416+
746360.PFWH6_4595(<)
746360.PFWH6_4599+
746360.PFWH6_4598+
746360.PFWH6_4629+not used
746360.PFWH6_1292+
746360.PFWH6_1628+
746360.PFWH6_0280+
746360.PFWH6_3734+
746360.PFWH6_3735+
746360.PFWH6_3738+
746360.PFWH6_2171+
746360.PFWH6_2174(>)
746360.PFWH6_5779(+)(plastid)
746360.PFWH6_5190+
746360.PFWH6_5195+
746360.PFWH6_4640(PF06945)
746360.PFWH6_3037+
746360.PFWH6_2618+
746360.PFWH6_2619+
746360.PFWH6_4346+
746360.PFWH6_4349+
746360.PFWH6_5831+
746360.PFWH6_2441+
746360.PFWH6_5640+
746360.PFWH6_2156+
746360.PFWH6_2153PF13816
746360.PFWH6_2152PF13816
746360.PFWH6_5758+
746360.PFWH6_5756(+)(PF03692)
746360.PFWH6_1185+
746360.PFWH6_4808+
746360.PFWH6_1494+
746360.PFWH6_5324(<)
746360.PFWH6_4326+
746360.PFWH6_4327+
746360.PFWH6_0131+
746360.PFWH6_5815(+)(plastid)
746360.PFWH6_5810+
746360.PFWH6_3437(<)
746360.PFWH6_3432+
746360.PFWH6_0886+
746360.PFWH6_4308+
746360.PFWH6_4304+
746360.PFWH6_1141+
746360.PFWH6_1492(PF03692)
746360.PFWH6_4511+
746360.PFWH6_4515(>)
746360.PFWH6_4517+
746360.PFWH6_0363(+)(mitochondrial)
746360.PFWH6_3185+
746360.PFWH6_3459(+)+
746360.PFWH6_3988(<)not used
746360.PFWH6_2580+
746360.PFWH6_5678+
746360.PFWH6_5675+
746360.PFWH6_5673+
746360.PFWH6_1771+not used
746360.PFWH6_0176+
746360.PFWH6_4724+
746360.PFWH6_5455(+)+
746360.PFWH6_3843+
746360.PFWH6_1160+
746360.PFWH6_4538+
746360.PFWH6_0696+
746360.PFWH6_0347+
746360.PFWH6_5531+
746360.PFWH6_5617+
746360.PFWH6_1776+
746360.PFWH6_4503+
746360.PFWH6_4507+
746360.PFWH6_0682+
746360.PFWH6_3867+
746360.PFWH6_1636+
746360.PFWH6_5133+
746360.PFWH6_4555+
746360.PFWH6_5415+
746360.PFWH6_0419+
746360.PFWH6_3675+
746360.PFWH6_3678+
746360.PFWH6_0890(>)
746360.PFWH6_3496+
746360.PFWH6_2721+
746360.PFWH6_4763+
746360.PFWH6_1127+
746360.PFWH6_1381+
746360.PFWH6_1201+not used
746360.PFWH6_3504(>)
746360.PFWH6_0383+
746360.PFWH6_3657+
746360.PFWH6_2748+
746360.PFWH6_4296+
746360.PFWH6_4291+
746360.PFWH6_4746(PF06293)
746360.PFWH6_4781+
746360.PFWH6_4789(PF06945)not used
746360.PFWH6_3829(+)(plastid)
746360.PFWH6_2995+
746360.PFWH6_5179+
746360.PFWH6_3103+
746360.PFWH6_5845+
746360.PFWH6_1085+
746360.PFWH6_1086+
746360.PFWH6_4015+
746360.PFWH6_5068(+)+
746360.PFWH6_3371+
746360.PFWH6_3374+
746360.PFWH6_2978(PF14539)
746360.PFWH6_1698+
746360.PFWH6_0928+
746360.PFWH6_4461+
746360.PFWH6_4466(>)
746360.PFWH6_1060(+)(PF05971)
746360.PFWH6_4075+
746360.PFWH6_0558+
746360.PFWH6_3578(+)(mitochondrial)
746360.PFWH6_3313+not used
746360.PFWH6_2954(+)(ER)
746360.PFWH6_0639+
746360.PFWH6_0630+
746360.PFWH6_0631(>)
746360.PFWH6_0942+
746360.PFWH6_0499(PF06293)
746360.PFWH6_4447(+)(PF03692)
746360.PFWH6_2231+
746360.PFWH6_2237(+)(mitochondrial); not used
746360.PFWH6_0790(>)
746360.PFWH6_4278(PF02133)
746360.PFWH6_0798+
746360.PFWH6_1952(PF02133)
746360.PFWH6_3083(+)(mitochondrial)
746360.PFWH6_3554(+)(plastid)
746360.PFWH6_1565+
746360.PFWH6_0969(PF03692)
746360.PFWH6_4422+
746360.PFWH6_2210(PF02133)
746360.PFWH6_4212+not used
746360.PFWH6_4213(+)(mitochondrial)
746360.PFWH6_5929+
746360.PFWH6_2910+not used
746360.PFWH6_2914+
746360.PFWH6_1581+
746360.PFWH6_4158(>)
746360.PFWH6_1870(+)(plastid)
746360.PFWH6_1872+
746360.PFWH6_0870(+)(plastid)
746360.PFWH6_3895(PF00182)
746360.PFWH6_2492(<)
746360.PFWH6_2542+
746360.PFWH6_0755+
746360.PFWH6_1914+
746360.PFWH6_4099(+)(PF12255)
746360.PFWH6_1245+
746360.PFWH6_4170+
746360.PFWH6_4179(+)(plastid)
746360.PFWH6_0255+
746360.PFWH6_0250(>)
746360.PFWH6_4797+
746360.PFWH6_4271(+)(PF02133)
746360.PFWH6_2853+
746360.PFWH6_4792+
746360.PFWH6_3467+
746360.PFWH6_0736+
746360.PFWH6_0732(>)
746360.PFWH6_1427+
746360.PFWH6_0575(>)
746360.PFWH6_4614+
746360.PFWH6_4615+
746360.PFWH6_3394+
746360.PFWH6_3395+
746360.PFWH6_2625+
746360.PFWH6_2627+
746360.PFWH6_3932+
746360.PFWH6_5576+
746360.PFWH6_0270+
746360.PFWH6_2615+
746360.PFWH6_3722+
746360.PFWH6_5767+
746360.PFWH6_5763+
746360.PFWH6_0865(+)+
746360.PFWH6_3009+
746360.PFWH6_5374+
746360.PFWH6_4415+
746360.PFWH6_4135(>)
746360.PFWH6_0293+
746360.PFWH6_5523+
746360.PFWH6_2166+
746360.PFWH6_4839(>)
746360.PFWH6_1466+
746360.PFWH6_0597(+)+
746360.PFWH6_3022+
746360.PFWH6_3685(PF00199)
746360.PFWH6_2376+
746360.PFWH6_2372(+)(mitochondrial)
746360.PFWH6_3979+
746360.PFWH6_5683+
746360.PFWH6_2082(+)plastid
746360.PFWH6_2880+
746360.PFWH6_1034+
746360.PFWH6_4335+
746360.PFWH6_1033(>)
746360.PFWH6_5820+
746360.PFWH6_4202+
746360.PFWH6_5260+
746360.PFWH6_3762(>)
746360.PFWH6_3764+
746360.PFWH6_2412(>)
746360.PFWH6_2411+
746360.PFWH6_1192(+)(PF00182)
746360.PFWH6_4675+
746360.PFWH6_2311(PF05277)
746360.PFWH6_3952+
746360.PFWH6_1839+
746360.PFWH6_1838+
746360.PFWH6_1834+
746360.PFWH6_5801+
746360.PFWH6_5894+
746360.PFWH6_0648(+)(mitochondrial); not used
746360.PFWH6_2125+
746360.PFWH6_2121(+)+
746360.PFWH6_2436+
746360.PFWH6_4877+
746360.PFWH6_4872+
746360.PFWH6_0801+
746360.PFWH6_4692(>)
746360.PFWH6_0374(PF02133)
746360.PFWH6_3422(PF10685)
746360.PFWH6_4992(+)(>)
746360.PFWH6_1763+
746360.PFWH6_1851+
746360.PFWH6_4739+
746360.PFWH6_2100+
746360.PFWH6_4851+
746360.PFWH6_1372(PF03692)
746360.PFWH6_1373+
746360.PFWH6_1370+
746360.PFWH6_1371+
746360.PFWH6_0359(PF03692)
746360.PFWH6_3194(+)(PF06945)
746360.PFWH6_3196+
746360.PFWH6_2712+not used
746360.PFWH6_1023+
746360.PFWH6_0325+
746360.PFWH6_5849+
746360.PFWH6_0164+
746360.PFWH6_4713+
746360.PFWH6_2531(>)
746360.PFWH6_2532+
746360.PFWH6_3877(<)
746360.PFWH6_3874+
746360.PFWH6_5431(+)(plastid)
746360.PFWH6_0407+
746360.PFWH6_0406+
746360.PFWH6_5527+
746360.PFWH6_2803(+)(plastid)
746360.PFWH6_4823+
746360.PFWH6_1723+
746360.PFWH6_1704+
746360.PFWH6_5416+
746360.PFWH6_1118+
746360.PFWH6_0070(+)(PF00199)
746360.PFWH6_2820+
746360.PFWH6_0074+
746360.PFWH6_4816(+)
746360.PFWH6_3347(+)
746360.PFWH6_1130(+)
746360.PFWH6_3131(+)
746360.PFWH6_1896(+)
746360.PFWH6_1093(+)
746360.PFWH6_2770(+)
746360.PFWH6_5208(+)
746360.PFWH6_0056(+)
746360.PFWH6_2837(+)
746360.PFWH6_2183(+)
746360.PFWH6_2982+
746360.PFWH6_1512(+)not used
746360.PFWH6_1513(+)
746360.PFWH6_4400(+)
746360.PFWH6_3112(+)
746360.PFWH6_5228(+)
746360.PFWH6_1216(+)
746360.PFWH6_4249(+)
746360.PFWH6_4243(+)
746360.PFWH6_0038(+)
746360.PFWH6_4062(+)
746360.PFWH6_1710(+)
746360.PFWH6_0667(+)
746360.PFWH6_2961(+)
746360.PFWH6_0047(+)
746360.PFWH6_3797(+)
746360.PFWH6_3798(+)
746360.PFWH6_2553(+)
746360.PFWH6_2552(+)
746360.PFWH6_2224(+)
746360.PFWH6_3057(+)
746360.PFWH6_1949(+)
746360.PFWH6_0543(+)
746360.PFWH6_2906(+)
746360.PFWH6_3549(+)
746360.PFWH6_2943(+)
746360.PFWH6_5495(+)
746360.PFWH6_1554(+)
746360.PFWH6_3154(+)not used
746360.PFWH6_4209(+)
746360.PFWH6_5266(+)
746360.PFWH6_0565(+)
746360.PFWH6_4234(+)
746360.PFWH6_5912(+)
746360.PFWH6_3523(+)
746360.PFWH6_3522(+)
746360.PFWH6_2070(+)
746360.PFWH6_2071(+)
746360.PFWH6_2077(+)
746360.PFWH6_0994+
746360.PFWH6_4097(+)
746360.PFWH6_2487(+)
746360.PFWH6_1010(+)
746360.PFWH6_4220(+)
746360.PFWH6_4031(+)
746360.PFWH6_5935(+)not used
746360.PFWH6_2900(+)
746360.PFWH6_2016(+)
746360.PFWH6_0246(+)
746360.PFWH6_5656(+)
746360.PFWH6_3260(+)
746360.PFWH6_3266(+)
746360.PFWH6_3511(+)
746360.PFWH6_1925(+)
746360.PFWH6_1928(+)
746360.PFWH6_1437(+)
746360.PFWH6_0522(+)
746360.PFWH6_0808(+)
746360.PFWH6_3075(+)
746360.PFWH6_3073(+)
746360.PFWH6_2383(+)
746360.PFWH6_2657(+)
746360.PFWH6_5566(+)
746360.PFWH6_4386(+)
746360.PFWH6_4381(+)
746360.PFWH6_4160(+)
746360.PFWH6_0370(+)
746360.PFWH6_0097(+)
746360.PFWH6_1291(+)
746360.PFWH6_2636(+)
746360.PFWH6_5360(+)
746360.PFWH6_0527(+)
746360.PFWH6_3229(+)
746360.PFWH6_3226(+)
746360.PFWH6_5776(+)
746360.PFWH6_5193(+)
746360.PFWH6_1475(+)
746360.PFWH6_1470(+)
746360.PFWH6_4643(+)
746360.PFWH6_4642(+)
746360.PFWH6_2612(+)
746360.PFWH6_3964(+)
746360.PFWH6_4348(+)
746360.PFWH6_4123(+)
746360.PFWH6_2114(+)
746360.PFWH6_3206(+)
746360.PFWH6_3208(+)
746360.PFWH6_2407(+)
746360.PFWH6_4800(+)
746360.PFWH6_0850(+)
746360.PFWH6_1459(+)
746360.PFWH6_0586(+)
746360.PFWH6_4840(+)
746360.PFWH6_4662(+)
746360.PFWH6_4661(+)
746360.PFWH6_2366(+)
746360.PFWH6_2095(+)
746360.PFWH6_2895(+)
746360.PFWH6_1664(+)
746360.PFWH6_0132(+)not used
746360.PFWH6_5813(+)
746360.PFWH6_3770(+)
746360.PFWH6_2131(+)
746360.PFWH6_1605(+)
746360.PFWH6_0308(+)
746360.PFWH6_3434(+)
746360.PFWH6_3431(+)not used
746360.PFWH6_3439(+)
746360.PFWH6_5659(+)
746360.PFWH6_0885(+)
746360.PFWH6_5655(+)
746360.PFWH6_1824(+)
746360.PFWH6_0150(+)
746360.PFWH6_5872(+)
746360.PFWH6_3637(+)
746360.PFWH6_0369(+)
746360.PFWH6_3184(+)
746360.PFWH6_3182(+)
746360.PFWH6_2588(+)
746360.PFWH6_4984(+)
746360.PFWH6_4067(+)not used
746360.PFWH6_3842(+)
746360.PFWH6_5449(+)
746360.PFWH6_1806(+)
746360.PFWH6_4533(+)
746360.PFWH6_0060(+)
746360.PFWH6_2871(+)
746360.PFWH6_2875(+)
746360.PFWH6_3474(+)
746360.PFWH6_0683(+)
746360.PFWH6_1752(+)
746360.PFWH6_1753(+)
746360.PFWH6_0174(+)
746360.PFWH6_0421(+)
746360.PFWH6_3864(+)
746360.PFWH6_5425(+)
746360.PFWH6_1102(+)
746360.PFWH6_4559(+)
746360.PFWH6_3642(+)
746360.PFWH6_3494(+)
746360.PFWH6_5634(+)
746360.PFWH6_5094(+)
746360.PFWH6_5093(+)not used
746360.PFWH6_4942(+)
746360.PFWH6_4891(+)
746360.PFWH6_5404(+)
746360.PFWH6_4578(+)
746360.PFWH6_1387(+)
746360.PFWH6_1386(+)
746360.PFWH6_1380(+)
746360.PFWH6_0387(+)
746360.PFWH6_3127(+)
746360.PFWH6_2526(+)
746360.PFWH6_3350(+)
746360.PFWH6_3821(+)
746360.PFWH6_2191(+)
746360.PFWH6_2992(+)
746360.PFWH6_2999(+)
746360.PFWH6_0670(+)
746360.PFWH6_1884(+)
746360.PFWH6_3372(+)
746360.PFWH6_2971(+)
746360.PFWH6_2973(+)
746360.PFWH6_3162(+)
746360.PFWH6_1053(+)
746360.PFWH6_2048(+)
746360.PFWH6_1048(+)
746360.PFWH6_4049(+)
746360.PFWH6_3081(+)
746360.PFWH6_2682(+)
746360.PFWH6_2680(+)
746360.PFWH6_5487(+)
746360.PFWH6_1563(+)
746360.PFWH6_4420(+)
746360.PFWH6_2351(+)
746360.PFWH6_1028(+)
746360.PFWH6_0872(+)
746360.PFWH6_3270(+)
746360.PFWH6_2273(+)
746360.PFWH6_2235(+)
746360.PFWH6_4232(+)
746360.PFWH6_3042(+)
746360.PFWH6_3046(+)
746360.PFWH6_3045(+)
746360.PFWH6_2649(+)
746360.PFWH6_2640(+)
746360.PFWH6_2029(+)
746360.PFWH6_2028(+)
746360.PFWH6_0251(+)
746360.PFWH6_2258(+)
746360.PFWH6_2259(+)
746360.PFWH6_1220(+)
746360.PFWH6_1937(+)
746360.PFWH6_0731(+)
746360.PFWH6_0571(+)
746360.PFWH6_3391(+)
746360.PFWH6_3931(+)
746360.PFWH6_3939(+)
746360.PFWH6_5570(+)
746360.PFWH6_5580(+)
746360.PFWH6_4375(+)
746360.PFWH6_4112(+)
746360.PFWH6_5137(+)
746360.PFWH6_5765(+)
746360.PFWH6_5764(+)not used
746360.PFWH6_5183(+)
746360.PFWH6_5189(+)
746360.PFWH6_0864(+)
746360.PFWH6_4583(+)
746360.PFWH6_4359(+)
746360.PFWH6_4351(+)
746360.PFWH6_1877(+)
746360.PFWH6_1156(+)
746360.PFWH6_1658(+)
746360.PFWH6_2933(+)
746360.PFWH6_3211(+)
746360.PFWH6_0331(+)
746360.PFWH6_0334(+)
746360.PFWH6_4651(+)
746360.PFWH6_3028(+)
746360.PFWH6_3021(+)
746360.PFWH6_3683(+)
746360.PFWH6_2087(+)
746360.PFWH6_2089(+)
746360.PFWH6_4337(+)
746360.PFWH6_4338(+)
746360.PFWH6_5828(+)
746360.PFWH6_4207(+)
746360.PFWH6_4203(+)
746360.PFWH6_1964(+)
746360.PFWH6_3769(+)
746360.PFWH6_2149(+)
746360.PFWH6_1996(+)
746360.PFWH6_1196(+)
746360.PFWH6_1197(+)
746360.PFWH6_4810(+)
746360.PFWH6_1338(+)
746360.PFWH6_4671(+)
746360.PFWH6_1835(+)
746360.PFWH6_0120(+)
746360.PFWH6_0122(+)
746360.PFWH6_0124(+)
746360.PFWH6_5806(+)
746360.PFWH6_5897(+)
746360.PFWH6_0649(+)
746360.PFWH6_2431(+)
746360.PFWH6_2432(+)not used
746360.PFWH6_5474(+)
746360.PFWH6_5479(+)not used
746360.PFWH6_4876(+)
746360.PFWH6_1761(+)
746360.PFWH6_1670(+)
746360.PFWH6_3853(+)
746360.PFWH6_5101(+)
746360.PFWH6_0685(+)
746360.PFWH6_3623(+)not used
746360.PFWH6_3625(+)
746360.PFWH6_2861(+)
746360.PFWH6_3993(+)
746360.PFWH6_2719(+)
746360.PFWH6_5599(+)
746360.PFWH6_4710(+)
746360.PFWH6_4719(+)
746360.PFWH6_4718(+)
746360.PFWH6_5052(+)
746360.PFWH6_3299(+)
746360.PFWH6_1975(+)
746360.PFWH6_2530(+)
746360.PFWH6_1977(+)
746360.PFWH6_2533(+)
746360.PFWH6_2473(+)
746360.PFWH6_4529(+)
746360.PFWH6_1352(+)
746360.PFWH6_5408(+)
746360.PFWH6_3609(+)
746360.PFWH6_3461(+)
746360.PFWH6_5605(+)
746360.PFWH6_4955(+)
746360.PFWH6_4956(+)
746360.PFWH6_1721(+)
746360.PFWH6_5143(+)
746360.PFWH6_0641(+)
746360.PFWH6_0469(+)
746360.PFWH6_0467(+)
746360.PFWH6_2759(+)
746360.PFWH6_2750(+)
746360.PFWH6_5084(+)
746360.PFWH6_1253(+)
746360.PFWH6_1709(+)
746360.PFWH6_4757(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 1.2 (12/10 KEGG proteins)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0.0 (0/10 KEGG proteins)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 2.75 (22/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================