Metamenu

Effective results for Leuconostoc argentinum KCTC 3773 (eggnog40)

Summary

Number of putative secreted proteins: 11
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 11 proteins (2 high, 9 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
886872.LargK3_010100006731(PF09683)ER
886872.LargK3_010100006195(PF12949)mitochondrial
886872.LargK3_010100003538PF08626(mitochondrial)
886872.LargK3_010100005320(PF13936)
886872.LargK3_010100003877(PF13936)
886872.LargK3_010100002681(PF13936)
886872.LargK3_010100002351(PF13936)
886872.LargK3_010100001637(PF05495)
886872.LargK3_010100009146PF14573
886872.LargK3_010100007139(PF13936)
886872.LargK3_010100007134(PF13936)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================