Effective results for Streptococcus sp. oral taxon 056 str. F0418 (eggnog40)

Summary

Number of putative secreted proteins: 94
- Predicted by T4SEpre: 81
- Predicted by EffectiveELD: 10 eukaryotic-like domains, contained in 28 proteins (1 high, 27 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
904294.HMPREF9182_1096+mitochondrial
904294.HMPREF9182_1874+ER
904294.HMPREF9182_0431+ER
904294.HMPREF9182_1274+(mitochondrial)
904294.HMPREF9182_1857+ER
904294.HMPREF9182_1475+mitochondrial; (mitochondrial)
904294.HMPREF9182_1826+ER
904294.HMPREF9182_2023+ER
904294.HMPREF9182_0067+ER
904294.HMPREF9182_1137PF02916(mitochondrial)
904294.HMPREF9182_0879+ER
904294.HMPREF9182_0508+ER
904294.HMPREF9182_0539+ER
904294.HMPREF9182_0787+ER
904294.HMPREF9182_0837+ER
904294.HMPREF9182_1197(PF05257)ER
904294.HMPREF9182_0564(PF05257)ER
904294.HMPREF9182_0819+(mitochondrial)
904294.HMPREF9182_1361(PF00344)mitochondrial
904294.HMPREF9182_1213+ER
904294.HMPREF9182_1566+(ER)
904294.HMPREF9182_0101+(ER)
904294.HMPREF9182_0106+ER
904294.HMPREF9182_1746+ER
904294.HMPREF9182_0801+ER
904294.HMPREF9182_1224(PF05257)ER
904294.HMPREF9182_2043(PF00344)(mitochondrial)
904294.HMPREF9182_1386(PF01610)(mitochondrial)
904294.HMPREF9182_1158+(mitochondrial)
904294.HMPREF9182_1957(PF01610)(mitochondrial)
904294.HMPREF9182_0944+(mitochondrial)
904294.HMPREF9182_0486+(ER)
904294.HMPREF9182_1360+(mitochondrial)
904294.HMPREF9182_1743+(plastid)
904294.HMPREF9182_1663+
904294.HMPREF9182_1669+
904294.HMPREF9182_1388+
904294.HMPREF9182_1387(PF01610)
904294.HMPREF9182_1415+
904294.HMPREF9182_1008+
904294.HMPREF9182_1064+
904294.HMPREF9182_2008+
904294.HMPREF9182_0646+
904294.HMPREF9182_1602+
904294.HMPREF9182_1295+
904294.HMPREF9182_2039(PF01501)
904294.HMPREF9182_0718+
904294.HMPREF9182_0403(PF09359)
904294.HMPREF9182_1107+
904294.HMPREF9182_1103+
904294.HMPREF9182_0087(PF01501)
904294.HMPREF9182_0667+
904294.HMPREF9182_0665+
904294.HMPREF9182_0984+
904294.HMPREF9182_1451+
904294.HMPREF9182_0690+
904294.HMPREF9182_1587(PF01351)
904294.HMPREF9182_0462+
904294.HMPREF9182_1125(PF05704)
904294.HMPREF9182_1336+
904294.HMPREF9182_1934+
904294.HMPREF9182_1807(PF01610)
904294.HMPREF9182_0041(PF01351)
904294.HMPREF9182_0040(PF01351)
904294.HMPREF9182_0454(PF01610)
904294.HMPREF9182_0453(PF01610)
904294.HMPREF9182_1030+
904294.HMPREF9182_0218+
904294.HMPREF9182_1963+
904294.HMPREF9182_0033+
904294.HMPREF9182_0534(PF05257)
904294.HMPREF9182_1958(PF01610)
904294.HMPREF9182_0200+
904294.HMPREF9182_0337+
904294.HMPREF9182_1553+
904294.HMPREF9182_1178+
904294.HMPREF9182_0838+
904294.HMPREF9182_0788+
904294.HMPREF9182_0162+
904294.HMPREF9182_1768+
904294.HMPREF9182_1994(PF01610)not used
904294.HMPREF9182_1570+
904294.HMPREF9182_1366+
904294.HMPREF9182_2056+
904294.HMPREF9182_1565+
904294.HMPREF9182_1562(PF09818)
904294.HMPREF9182_1561(PF09818)
904294.HMPREF9182_1183(PF02938)
904294.HMPREF9182_0617+
904294.HMPREF9182_2042(PF01501)
904294.HMPREF9182_1425(PF09359)
904294.HMPREF9182_0340+
904294.HMPREF9182_1725(PF02938)
904294.HMPREF9182_0287+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================