Metamenu

Genomes encoding eukaryotic-like proteins

PF00060 Ligand-gated ion channel

Copy number in non-pathogens:
Mean=0.05 Stddev=0.23

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Aliivibrio logei ATCC 35077 s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Vibrio harveyi s 4 1
Vibrio campbellii s 4 1
Vibrio harveyi s 4 1
Photobacterium leiognathi subsp. mandapamensis svers.1.1. s 4 1
Sphingomonas-like bacterium B12 s 4 1
Photobacterium leiognathi lrivu.4.1 s 4 1
Vibrio harveyi NBRC 15634 = ATCC 14126 s 4 1
Vibrio owensii LMG 25430 s 4 1
Vibrio owensii CAIM 1854 = LMG 25443 s 4 1
Vibrio rotiferianus CAIM 577 = LMG 21460 s 4 1
Vibrio harveyi NBRC 15634 = ATCC 14126 s 4 1
Aliivibrio salmonicida LFI1238 s 4 1
Bradyrhizobium sp. STM 3843 s 4 1
Vibrio harveyi VHJR7 s 4 1
Aliivibrio wodanis s 4 1
Tatlockia micdadei s 4 1
Frankia alni ACN14a s 4 1
Aliivibrio fischeri s 4 1
Vibrio splendidus s 4 1
Methylobacterium radiotolerans JCM 2831 s 4 1
Chthoniobacter flavus Ellin428 s 4 1
Vibrio sp. HENC-01 s 4 1
Vibrio sp. HENC-03 s 4 1
Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 s 4 1
Vibrio harveyi E385 s 4 1
Mesorhizobium opportunistum WSM2075 p 4 1
Geminocystis herdmanii PCC 6308 s 4 1
Marichromatium purpuratum 984 s 4 1
Geitlerinema sp. PCC 7105 s 4 1
Calothrix sp. PCC 7103 s 4 1
Bradyrhizobium elkanii USDA 76 s 4 1
Pleurocapsa sp. PCC 7319 s 4 1
Cyclobacterium marinum DSM 745 s 4 1
Acetobacteraceae bacterium AT-5844 s 4 1
Vibrio parahaemolyticus s 4 1
Photobacterium damselae subsp. damselae CIP 102761 s 4 1
Afipia sp. P52-10 s 4 1
Vibrio campbellii HY01 s 4 1
Algoriphagus machipongonensis s 4 1
Synechococcus sp. PCC 7335 s 8 2
Ruegeria sp. R11 s 4 1
Rhodobacteraceae bacterium KLH11 s 4 1
Rhizobium mesoamericanum STM6155 s 4 1
Chryseobacterium palustre DSM 21579 s 4 1
Bradyrhizobium elkanii USDA 3259 s 4 1
Mesorhizobium ciceri CMG6 s 4 1
Bradyrhizobium sp. Ai1a-2 s 4 1
Riemerella columbina DSM 16469 s 4 1
Bradyrhizobium sp. ARR65 s 4 1
Bradyrhizobium sp. Ec3.3 s 4 1
Bradyrhizobium elkanii WSM1741 s 4 1
Bradyrhizobium sp. Cp5.3 s 4 1
Bradyrhizobium elkanii USDA 3254 s 4 1
Bradyrhizobium elkanii WSM2783 s 4 1
Gramella echinicola DSM 19838 s 4 1
Methylobacterium sp. 285MFTsu5.1 s 4 1
Echinicola pacifica DSM 19836 s 4 1
Afipia clevelandensis ATCC 49720 s 4 1
Afipia felis ATCC 53690 s 4 1
Rhizobium grahamii CCGE 502 s 4 1
Vibrio harveyi CAIM 1792 s 4 1
Vibrio harveyi ZJ0603 s 4 1
Ruegeria conchae s 4 1
Vibrio harveyi 1DA3 s 4 1
Vibrio splendidus 0407ZC148 s 4 1
Ochrobactrum intermedium M86 s 4 1
Vibrio harveyi AOD131 s 4 1
Vibrio fischeri SR5 s 4 1
Leisingera sp. ANG1 s 4 1
Gillisia sp. CAL575 s 4 1
Pseudomonas stutzeri MF28 s 4 1
Photobacterium damselae subsp. piscicida DI21 s 4 1
Ochrobactrum intermedium LMG 3301 s 4 1
Bradyrhizobium elkanii USDA 94 s 4 1
Roseomonas gilardii subsp. rosea ATCC BAA-691 s 4 1
Rhizobium larrymoorei ATCC 51759 s 4 1
Afipia broomeae ATCC 49717 s 4 1
Mesorhizobium sp. WSM1293 s 4 1
Ruegeria sp. TM1040 s 4 1
Ochrobactrum anthropi ATCC 49188 s 4 1
Nostoc punctiforme PCC 73102 s 4 1
Phaeobacter inhibens 2.10 s 4 1
Phaeobacter inhibens DSM 17395 s 4 1
Vibrio fischeri MJ11 s 4 1
Phaeobacter gallaeciensis DSM 26640 s 4 1
Ochrobactrum anthropi s 4 1
Mycobacterium neoaurum ATCC 25795 s 4 1
Maribacter antarcticus DSM 21422 s 4 1
Roseomonas mucosa ATCC BAA-692 s 4 1
Ferrimonas marina s 4 1
Ochrobactrum anthropi s 4 1
Vibrio owensii CAIM 1854 = LMG 25443 s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Afipia sp. NBIMC_P1-C1 s 4 1
Afipia sp. NBIMC_P1-C2 s 4 1
Afipia sp. NBIMC_P1-C3 s 4 1
Vibrio ichthyoenteri ATCC 700023 s 4 1
Afipia sp. OHSU_II-uncloned s 4 1
Bradyrhizobium sp. OHSU_III s 4 1
Afipia sp. OHSU_I-C6 s 4 1
Afipia sp. OHSU_I-C4 s 4 1
Afipia sp. OHSU_I-uncloned s 4 1
Afipia sp. OHSU_II-C2 s 4 1
Afipia sp. OHSU_II-C1 s 4 1
Tatlockia micdadei s 4 1
Myxosarcina sp. GI1 s 4 1
Pseudomonas mendocina ZWU0006 s 4 1
Novosphingobium malaysiense s 4 1
Vibrio harveyi s 4 1
Vibrio campbellii s 4 1
Bradyrhizobium elkanii s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Martelella endophytica s 4 1
Phaeobacter gallaeciensis DSM 26640 s 4 1
Photobacterium kishitanii s 4 1
Photobacterium kishitanii s 4 1
Photobacterium kishitanii s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium iliopiscarium s 4 1
Photobacterium iliopiscarium s 4 1
Photobacterium kishitanii s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium angustum s 4 1
Photobacterium leiognathi s 4 1
Photobacterium leiognathi s 4 1
Photobacterium damselae subsp. damselae s 4 1
Ruegeria mobilis s 4 1
Ochrobactrum anthropi s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Ruegeria mobilis s 4 1
Salmonella enterica s 4 1
Salmonella enterica s 4 1
Salmonella enterica s 4 1
Vibrio parahaemolyticus s 4 1
Tatlockia micdadei s 4 1
Aliivibrio fischeri s 4 1
Croceitalea dokdonensis DOKDO 023 s 8 2
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi NBRC 15634 = ATCC 14126 s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio harveyi s 4 1
Vibrio splendidus s 4 1
Vibrio splendidus s 4 1
Salmonella enterica s 4 1
Tatlockia micdadei s 4 1
Photobacterium kishitanii s 4 1
Ochrobactrum intermedium M86 s 4 1
Aliivibrio wodanis s 4 1
Aliivibrio wodanis s 4 1
Aliivibrio wodanis s 4 1
Aliivibrio wodanis s 4 1
Vibrio splendidus s 4 1
Vibrio splendidus s 4 1
Vibrio splendidus s 4 1
Vibrio splendidus s 4 1
Vibrio splendidus s 4 1
Vibrio harveyi s 4 1
Photobacterium leiognathi s 4 1
Vibrio harveyi s 4 1
Vibrio splendidus s 4 1
Vibrio campbellii s 4 1
Vibrio parahaemolyticus s 4 1
Methylobacterium phyllosphaerae s 4 1
Nostoc sp. KVJ20 s 4 1
Aliivibrio fischeri s 4 1
Ochrobactrum anthropi s 4 1
Photobacterium kishitanii s 4 1
Photobacterium kishitanii s 4 1
Photobacterium phosphoreum s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Photobacterium damselae subsp. damselae s 4 1
Photobacterium damselae subsp. damselae s 4 1
Vibrio splendidus s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio logei s 4 1
Vibrio lentus s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Bradyrhizobium elkanii s 4 1
Bradyrhizobium elkanii s 4 1
Pseudomonas stutzeri s 4 1
Vibrio splendidus s 4 1
Mesorhizobium sp. WSM1497 s 4 1
Photobacterium damselae subsp. damselae s 4 1
Vibrio harveyi s 4 1
Vibrio scophthalmi s 4 1
Vibrio scophthalmi s 4 1
Vibrio scophthalmi s 4 1
Ruegeria mobilis s 4 1
Aliivibrio fischeri s 4 1
Aliivibrio fischeri s 4 1
Photobacterium damselae subsp. piscicida s 4 1
Mycobacterium holsaticum s 4 1
Mycobacterium flavescens s 4 1
Vibrio splendidus s 4 1
Vibrio lentus s 4 1
Salmonella enterica s 4 1
Granulibacter bethesdensis s 4 1
Vibrio splendidus s 4 1
Vibrio campbellii s 4 1
Bradyrhizobium elkanii s 4 1
Vibrio harveyi s 4 1
Ochrobactrum pituitosum s 4 1
Vibrio harveyi s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Vibrio campbellii s 4 1
Tatlockia micdadei s 4 1
Tatlockia micdadei s 4 1
Photobacterium damselae subsp. damselae s 4 1
Vibrio fischeri ES114 s 4 1
Mesorhizobium ciceri biovar biserrulae WSM1271 s 4 1

*p=pathogen;s=symbiont