Genomes encoding eukaryotic-like proteins

PF01637 ATPase domain predominantly from Archaea

Copy number in non-pathogens:
Mean=0.08 Stddev=0.48

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 4 2
Bacteroides barnesiae DSM 18169 = JCM 13652 s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. longum s 4 2
Bifidobacterium longum subsp. longum s 4 2
Bifidobacterium longum subsp. longum s 4 2
Bifidobacterium longum subsp. longum s 4 2
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 s 4 2
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 s 6 3
Mycoplasma penetrans HF-2 s 6 3
Bacteroides fragilis NCTC 9343 s 4 2
Roseburia inulinivorans s 4 2
Simkania negevensis Z s 8 4
Alistipes ihumii AP11 s 4 2
Alistipes senegalensis JC50 s 4 2
Megasphaera elsdenii DSM 20460 s 6 3
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bacteroides fragilis 638R s 4 2
Bacteroides xylanisolvens SD CC 1b s 8 4
Bacteroides xylanisolvens SD CC 2a s 6 3
Mucinivorans hirudinis s 6 3
Bacteroides thetaiotaomicron s 8 4
Bacteroides fragilis s 4 2
[Eubacterium] rectale s 6 3
Parabacteroides distasonis s 4 2
Bacteroides thetaiotaomicron s 6 3
Roseburia inulinivorans s 4 2
Bacteroides vulgatus s 4 2
Bacteroides thetaiotaomicron s 6 3
Parabacteroides distasonis s 6 3
Bacteroides ovatus s 6 3
Bacteroides thetaiotaomicron s 4 2
Parabacteroides distasonis s 8 4
[Eubacterium] rectale s 6 3
Bifidobacterium longum s 6 3
Bifidobacterium longum s 4 2
Bifidobacterium longum s 4 2
Bifidobacterium longum s 4 2
Bacteroides stercoris ATCC 43183 s 6 3
Bacteroides intestinalis DSM 17393 s 6 3
Bacteroides dorei DSM 17855 s 6 3
Lactobacillus ultunensis DSM 16047 s 8 4
Treponema vincentii ATCC 35580 s 4 2
Lactobacillus gasseri 202-4 s 4 2
Lactobacillus crispatus JV-V01 s 4 2
Oribacterium sinus F0268 s 10 5
Lactobacillus crispatus 214-1 s 4 2
Prevotella buccalis ATCC 35310 s 4 2
Bacteroides xylanisolvens SD CC 1b s 8 4
Bacteroides xylanisolvens SD CC 2a s 6 3
Bacteroides ovatus SD CMC 3f s 6 3
Bacteroides cellulosilyticus DSM 14838 s 6 3
Bacteroides finegoldii DSM 17565 s 4 2
Hungatella hathewayi DSM 13479 s 4 2
Collinsella stercoris DSM 13279 s 4 2
Holdemanella biformis DSM 3989 s 6 3
Prevotella copri DSM 18205 s 22 11
Prevotella veroralis F0319 s 4 2
Bacteroides sp. 3_1_13 s 10 5
Parabacteroides sp. D26 s 6 3
Bacteroides helcogenes P 36-108 s 4 2
Prevotella bergensis DSM 17361 s 4 2
Sutterella parvirubra YIT 11816 s 6 3
Bacteroides ovatus ATCC 8483 s 8 4
Bacteroides uniformis ATCC 8492 s 8 4
Collinsella aerofaciens ATCC 25986 s 4 2
Odoribacter splanchnicus DSM 20712 s 8 4
Bacteroides salanitronis DSM 18170 s 4 2
Treponema succinifaciens DSM 2489 s 4 2
Olsenella profusa F0195 s 4 2
Oribacterium parvum ACB8 s 4 2
Treponema sp. JC4 s 4 2
Lachnospiraceae bacterium M18-1 s 6 3
Lachnospiraceae bacterium A2 s 4 2
Parabacteroides sp. ASF519 s 18 9
Alistipes finegoldii DSM 17242 s 6 3
Butyricimonas synergistica DSM 23225 s 16 8
Prevotella multisaccharivorax DSM 17128 s 4 2
Prevotella stercorea DSM 18206 s 4 2
Bacteroides fragilis str. J-143-4 s 6 3
Bacteroides fragilis str. I1345 s 6 3
Bacteroides fragilis str. J38-1 s 4 2
Bacteroides fragilis str. A7 (UDC12-2) s 6 3
Bacteroides fragilis str. Ds-233 s 4 2
Bacteroides fragilis str. DS-166 s 4 2
Bacteroides fragilis str. 20793-3 s 4 2
Bacteroides fragilis str. 2-F-2 #4 s 6 3
Bacteroides fragilis str. 2-F-2 #7 s 4 2
Bacteroides fragilis str. 3988 T1 s 4 2
Bacteroides fragilis str. S23 R14 s 4 2
Bacteroides fragilis str. 1007-1-F #7 s 4 2
Bacteroides fragilis str. 1007-1-F #9 s 4 2
Bacteroides fragilis str. 1009-4-F #7 s 4 2
Bacteroides fragilis str. 1007-1-F #10 s 4 2
Bacteroides fragilis str. 1009-4-F #10 s 4 2
Bacteroides fragilis str. 3397 T14 s 4 2
Bacteroides fragilis str. 3397 N2 s 4 2
Bacteroides fragilis str. 3719 A10 s 4 2
Bacteroides fragilis str. 3774 T13 s 4 2
Bacteroides fragilis str. 2-F-2 #5 s 8 4
Bacteroides fragilis str. 3783N1-2 s 4 2
Bacteroides fragilis str. 3783N1-6 s 6 3
Bacteroides fragilis str. 3397 N3 s 4 2
Bacteroides fragilis str. 3719 T6 s 4 2
Bacteroides fragilis str. 3783N1-8 s 6 3
Bacteroides fragilis str. 3996 N(B) 6 s 8 4
Bacteroides fragilis str. 3783N2-1 s 4 2
Bacteroides fragilis str. 3986 T(B)9 s 4 2
Bacteroides fragilis str. 3976T7 s 4 2
Bacteroides fragilis str. 3976T8 s 6 3
Bacteroides fragilis str. 3986 T(B)13 s 4 2
Bacteroides fragilis str. 3986 N(B)22 s 4 2
Bacteroides fragilis str. 3988T(B)14 s 4 2
Bacteroides fragilis str. S6L3 s 6 3
Bacteroides fragilis str. S6L8 s 6 3
Bacteroides fragilis str. S6R5 s 6 3
Bacteroides fragilis str. S6R6 s 6 3
Bacteroides fragilis str. S24L15 s 4 2
Bacteroides fragilis str. S24L26 s 4 2
Bacteroides fragilis str. S24L34 s 4 2
Bacteroides fragilis str. S36L5 s 6 3
Bacteroides fragilis str. S36L11 s 6 3
Bacteroides fragilis str. S23L24 s 4 2
Bacteroides fragilis str. S38L3 s 4 2
Bacteroides fragilis str. S38L5 s 4 2
Bacteroides fragilis str. 3-F-2 #6 s 6 3
Bacteroides fragilis str. 34-F-2 #13 s 6 3
Bacteroides fragilis str. 1007-1-F #3 s 4 2
Bacteroides fragilis str. 1007-1-F #4 s 4 2
Bacteroides fragilis str. 3725 D9(v) s 10 5
Bacteroides fragilis str. S36L12 s 6 3
Lactobacillus aviarius subsp. aviarius DSM 20655 s 6 3
Lactobacillus kalixensis DSM 16043 s 4 2
Lactobacillus ultunensis DSM 16047 s 8 4
Lactobacillus kitasatonis DSM 16761 = JCM 1039 s 4 2
Streptococcus sobrinus TCI-80 s 4 2
Streptococcus sobrinus TCI-98 s 4 2
Streptococcus sobrinus TCI-107 s 4 2
Streptococcus sobrinus TCI-395 s 4 2
Streptococcus sobrinus TCI-357 s 4 2
Streptococcus sobrinus TCI-160 s 4 2
Streptococcus sobrinus TCI-175 s 4 2
Streptococcus sobrinus TCI-79 s 4 2
Streptococcus sobrinus TCI-342 s 4 2
Streptococcus sobrinus TCI-352 s 4 2
Streptococcus sobrinus TCI-215 s 4 2
Streptococcus sobrinus TCI-50 s 4 2
Streptococcus sobrinus TCI-56 s 4 2
Streptococcus sobrinus TCI-345 s 4 2
Streptococcus sobrinus TCI-355 s 4 2
Streptococcus sobrinus TCI-363 s 4 2
Streptococcus sobrinus TCI-366 s 4 2
Streptococcus sobrinus TCI-367 s 4 2
Streptococcus sobrinus TCI-396 s 4 2
Streptococcus sobrinus TCI-118 s 4 2
Streptococcus sobrinus TCI-172 s 4 2
Streptococcus sobrinus TCI-53 s 4 2
Streptococcus sobrinus TCI-77 s 4 2
Streptococcus sobrinus TCI-89 s 4 2
Streptococcus sobrinus TCI-377 s 4 2
Streptococcus sobrinus TCI-381 s 4 2
Streptococcus sobrinus TCI-384 s 4 2
Streptococcus sobrinus TCI-9 s 4 2
Streptococcus sobrinus TCI-13 s 4 2
Streptococcus sobrinus W1703 s 4 2
Catonella morbi ATCC 51271 s 6 3
Bacteroides cellulosilyticus WH2 s 6 3
Lachnospira multipara ATCC 19207 s 8 4
Streptococcus sobrinus DSM 20742 = ATCC 33478 s 4 2
Parabacteroides gordonii DSM 23371 s 6 3
Bacteroides barnesiae DSM 18169 = JCM 13652 s 4 2
Rikenella microfusus DSM 15922 s 4 2
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 4 2
Bifidobacterium longum DJO10A s 4 2
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 s 4 2
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 s 6 3
Bifidobacterium ruminantium DSM 6489 s 4 2
Bacteroides fragilis 3_1_12 s 14 7
Bacteroides sp. 1_1_6 s 6 3
Parabacteroides sp. 2_1_7 s 4 2
Bacteroides sp. 2_2_4 s 10 5
Bacteroides sp. 3_2_5 s 6 3
Bacteroides sp. 4_3_47FAA s 6 3
Bacteroides sp. 9_1_42FAA s 4 2
Bacteroides sp. D1 s 8 4
Bacteroides sp. D2 s 4 2
Bacteroides dorei 5_1_36/D4 s 4 2
Lactobacillus crispatus MV-1A-US s 4 2
Bacteroides sp. 2_1_16 s 6 3
Bacteroides sp. 2_1_22 s 8 4
Bacteroides sp. 2_1_33B s 4 2
Bacteroides sp. 3_1_33FAA s 4 2
Bacteroides sp. D20 s 6 3
Parabacteroides sp. D13 s 10 5
Lactobacillus crispatus 125-2-CHN s 4 2
Parabacteroides sp. 20_3 s 8 4
Bacteroides sp. 3_1_23 s 4 2
Bacteroides sp. 4_1_36 s 8 4
Bacteroides ovatus 3_8_47FAA s 6 3
Bacteroides sp. 3_1_19 s 4 2
Bacteroides sp. D22 s 8 4
Bacteroides sp. 1_1_30 s 6 3
Prevotella sp. C561 s 4 2
Lactobacillus crispatus SJ-3C-US s 4 2
Bacteroides oleiciplenus YIT 12058 s 8 4
Oribacterium parvum ACB1 s 4 2
Oribacterium asaccharolyticum ACB7 s 8 4
Lactobacillus crispatus FB077-07 s 4 2
Lactobacillus crispatus FB049-03 s 4 2
Bacteroides cellulosilyticus CL02T12C19 s 10 5
Bacteroides dorei CL02T00C15 s 6 3
Bacteroides dorei CL02T12C06 s 6 3
Bacteroides dorei CL03T12C01 s 6 3
Bacteroides fragilis CL03T00C08 s 6 3
Bacteroides fragilis CL03T12C07 s 6 3
Bacteroides fragilis CL05T12C13 s 6 3
Bacteroides fragilis CL07T00C01 s 4 2
Bacteroides fragilis CL07T12C05 s 4 2
Bacteroides nordii CL02T12C05 s 4 2
Bacteroides ovatus CL02T12C04 s 8 4
Bacteroides ovatus CL03T12C18 s 6 3
Bacteroides salyersiae CL02T12C01 s 6 3
Bacteroides uniformis CL03T00C23 s 8 4
Bacteroides uniformis CL03T12C37 s 8 4
Bacteroides vulgatus CL09T03C04 s 4 2
Bacteroides xylanisolvens CL03T12C04 s 10 5
Parabacteroides distasonis CL03T12C09 s 4 2
Parabacteroides distasonis CL09T03C24 s 4 2
Parabacteroides goldsteinii CL02T12C30 s 12 6
Parabacteroides johnsonii CL02T12C29 s 4 2
Bacteroides fragilis HMW 610 s 4 2
Bacteroides fragilis HMW 615 s 4 2
Bacteroides fragilis HMW 616 s 6 3
Bifidobacterium longum subsp. longum CMCC P0001 s 6 3
Lactobacillus crispatus EM-LC1 s 6 3
Butyricimonas virosa DSM 23226 s 4 2
Parabacteroides sp. D25 s 4 2
Bacteroides sp. HPS0048 s 6 3
Hungatella hathewayi 12489931 s 4 2
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 4 2
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 4 2
Treponema vincentii F0403 s 4 2
Bacteroides stercoris CC31F s 6 3
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 s 4 2
Fibrobacter succinogenes subsp. succinogenes S85 s 4 2
[Eubacterium rectale] ATCC 33656 s 6 3
Bifidobacterium longum subsp. longum JDM301 s 6 3
Treponema azotonutricium ZAS-9 s 4 2
Bifidobacterium longum DJO10A s 4 2
Lactobacillus johnsonii NCC 533 s 4 2
Fibrobacter succinogenes subsp. succinogenes S85 s 4 2
Prevotella ruminicola 23 s 4 2
Parabacteroides distasonis ATCC 8503 s 4 2
Bifidobacterium pullorum s 6 3
Bifidobacterium stellenboschense s 6 3
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Streptococcus sobrinus DSM 20742 = ATCC 33478 s 4 2
Butyrivibrio sp. AE2005 s 4 2
Selenomonas sp. AE3005 s 4 2
Bifidobacterium ruminantium DSM 6489 s 4 2
Butyrivibrio proteoclasticus FD2007 s 4 2
Butyrivibrio sp. LB2008 s 4 2
Butyrivibrio sp. MC2021 s 6 3
Ruminococcus sp. HUN007 s 6 3
Lachnospiraceae bacterium MA2020 s 8 4
Eubacterium ruminantium s 6 3
Eubacterium uniforme s 4 2
Treponema porcinum s 4 2
Treponema berlinense s 6 3
Gemmiger formicilis s 4 2
Prevotella ruminicola s 4 2
Succinivibrio dextrinosolvens DSM 3072 s 4 2
Butyrivibrio fibrisolvens DSM 3071 s 14 7
[Clostridium] aminophilum DSM 10710 s 6 3
Pseudobutyrivibrio xylanivorans DSM 14809 s 4 2
Pseudobutyrivibrio sp. LB2011 s 4 2
Lachnospiraceae bacterium MC2017 s 16 8
Lachnospiraceae bacterium AC2014 s 6 3
Selenomonas ruminantium AB3002 s 6 3
Butyrivibrio sp. AE2032 s 8 4
Butyrivibrio sp. AE3004 s 4 2
Bifidobacterium longum s 6 3
Bacteroides fragilis s 6 3
Bacteroides fragilis s 4 2
Bacteroides fragilis s 8 4
[Clostridium] aminophilum s 6 3
Bacteroides thetaiotaomicron s 4 2
Megasphaera elsdenii s 4 2
Butyrivibrio hungatei s 6 3
Megasphaera elsdenii s 4 2
Bacteroides thetaiotaomicron s 6 3
Bacteroides fragilis s 8 4
Bacteroides fragilis s 8 4
Bacteroides fragilis s 8 4
Lactobacillus gasseri s 4 2
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Bifidobacterium longum s 4 2
Bifidobacterium longum subsp. infantis s 6 3
Parabacteroides gordonii MS-1 s 6 3
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 14 7
Bacteroides fragilis s 6 3
Bacteroides ovatus s 8 4
Bacteroides dorei CL03T12C01 s 8 4
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Bacteroides fragilis s 6 3
Bacteroides fragilis s 4 2
Bifidobacterium longum s 4 2
Bacteroides ovatus s 8 4
Bacteroides thetaiotaomicron s 4 2
Lactobacillus crispatus s 4 2
Bacteroides caecimuris s 6 3
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 6 3
Bacteroides fragilis s 10 5
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Bacteroides fragilis s 8 4
Lactobacillus gallinarum s 4 2
Bacteroides thetaiotaomicron s 6 3
Bacteroides xylanisolvens s 6 3
Megasphaera elsdenii s 4 2
Prevotella ruminicola s 4 2
Prevotella ruminicola s 4 2
Bifidobacterium longum s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 6 3
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Lactobacillus crispatus s 4 2
Bacteroides caecimuris s 6 3
Bacteroides ovatus s 8 4
Bacteroides ovatus s 8 4
Bacteroides xylanisolvens s 6 3
Prevotella ruminicola s 4 2
Prevotella ruminicola s 4 2
Lactobacillus crispatus s 6 3
Bacteroides fragilis s 4 2
Bacteroides ovatus s 8 4
Lactobacillus crispatus s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bacteroides fragilis s 4 2
Bacteroides fragilis s 4 2
Bacteroides thetaiotaomicron s 6 3
Lachnospiraceae bacterium s 4 2
Bacteroides xylanisolvens s 8 4
Bacteroides xylanisolvens s 10 5
Bacteroides dorei s 4 2
Bacteroides ovatus s 4 2
Parabacteroides distasonis s 8 4
Bacteroides dorei s 10 5
Bifidobacterium longum s 4 2
Bifidobacterium longum subsp. infantis s 4 2
Bifidobacterium longum s 4 2
Bifidobacterium longum NCC2705 s 4 2
Bacteroides fragilis YCH46 s 6 3
Bacteroides thetaiotaomicron VPI-5482 s 4 2

*p=pathogen;s=symbiont