Genomes encoding eukaryotic-like proteins

PF09414 RNA ligase

Copy number in non-pathogens:
Mean=0.14 Stddev=0.45

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Streptomyces scabiei s 4 2
Chryseobacterium gleum ATCC 35910 s 4 2
Kutzneria sp. 744 s 6 3
Streptomyces thermolilacinus SPC6 s 4 2
Rivularia sp. PCC 7116 s 4 2
Calothrix sp. PCC 7103 s 8 4
Streptomyces ipomoeae 91-03 s 4 2
Runella zeae DSM 19591 s 4 2
Brevibacillus brevis FJAT-0809-GLX s 4 2
Nocardiopsis alba DSM 43377 s 4 2
Nocardiopsis synnemataformans DSM 44143 s 8 4
Bacteroides sp. HPS0048 s 4 2
Rhizobium leguminosarum bv. trifolii CC278f s 4 2
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 s 4 2
Nocardiopsis alba ATCC BAA-2165 s 4 2
Actinomadura madurae LIID-AJ290 s 4 2
Saccharibacillus sacchari DSM 19268 s 4 2
Delftia tsuruhatensis s 4 2
Streptomyces scabiei s 4 2
Streptomyces scabiei s 6 3
Acidovorax temperans s 4 2
Burkholderia ubonensis s 6 3
Burkholderia ubonensis s 6 3
Burkholderia ubonensis s 6 3
Burkholderia ubonensis s 4 2
Burkholderia ubonensis s 4 2
Burkholderia ubonensis s 4 2
Burkholderia ubonensis s 6 3
Delftia acidovorans s 4 2
Chryseobacterium indologenes s 4 2
Streptomyces scabiei s 4 2
Streptomyces europaeiscabiei s 4 2
Chryseobacterium indologenes s 4 2
Streptomyces scabiei s 4 2
Streptomyces scabiei s 4 2
Streptomyces europaeiscabiei s 4 2
Bosea sp. RAC05 s 4 2
Paenibacillus odorifer s 4 2
Delftia tsuruhatensis s 4 2
Flavobacterium columnare s 4 2
Flavobacterium columnare s 4 2
Streptomyces scabiei s 4 2
Streptomyces scabiei s 6 3
Streptomyces scabiei s 4 2
Streptomyces scabiei s 4 2

*p=pathogen;s=symbiont