Metamenu

Genomes encoding eukaryotic-like proteins

PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain

Copy number in non-pathogens:
Mean=0.33 Stddev=1.15

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 4 6
Streptomyces turgidiscabies s 6 8
Streptomyces acidiscabies s 4 5
Streptomyces acidiscabies s 4 5
Corynebacterium-like bacterium B27 s 4 5
Alistipes ihumii AP11 s 9 11
Alistipes senegalensis JC50 s 4 5
Bacteroides xylanisolvens SD CC 1b s 5 7
Bacteroides xylanisolvens SD CC 2a s 5 7
Bacteroides thetaiotaomicron s 5 7
Parabacteroides distasonis s 4 6
Bacteroides thetaiotaomicron s 4 6
Parabacteroides distasonis s 5 7
Parabacteroides distasonis s 4 6
Bacteroides thetaiotaomicron s 7 9
Bacteroides thetaiotaomicron s 6 8
Faecalicatena contorta s 4 6
Bacteroides thetaiotaomicron s 5 7
Parabacteroides distasonis s 5 7
Faecalibacterium prausnitzii s 13 16
Bacteroides ovatus s 6 8
Bacteroides thetaiotaomicron s 5 7
Parabacteroides distasonis s 5 7
Paenibacillus phocaensis s 4 5
Bacteroides dorei DSM 17855 s 4 5
Bacteroides xylanisolvens SD CC 1b s 5 7
Bacteroides vulgatus PC510 s 4 5
Bacteroides xylanisolvens SD CC 2a s 4 6
Bacteroides ovatus SD CMC 3f s 5 7
Bacteroides cellulosilyticus DSM 14838 s 8 10
[Clostridium] methylpentosum DSM 5476 s 29 34
Parabacteroides johnsonii DSM 18315 s 5 7
Bacteroides sp. 3_1_13 s 9 11
Parabacteroides sp. D26 s 5 7
Flectobacillus major DSM 103 s 4 5
Parabacteroides merdae ATCC 43184 s 6 8
Bacteroides ovatus ATCC 8483 s 6 8
Lachnospiraceae bacterium M18-1 s 12 15
Clostridium sp. ASF502 s 4 5
Parabacteroides sp. ASF519 s 6 8
Didymococcus colitermitum TAV2 s 6 8
Opitutaceae bacterium TAV1 s 12 15
Streptomyces turgidiscabies Car8 s 6 8
Clostridium sp. KLE 1755 s 6 8
Bacteroides cellulosilyticus WH2 s 8 10
Parabacteroides gordonii DSM 23371 s 4 5
Alistipes onderdonkii WAL 8169 = DSM 19147 s 4 6
Clostridiales bacterium NK3B98 s 6 8
Echinicola pacifica DSM 19836 s 8 10
Bacteroides sp. 1_1_6 s 4 6
Parabacteroides sp. 2_1_7 s 4 6
Bacteroides sp. 2_2_4 s 5 7
Bacteroides sp. 9_1_42FAA s 4 5
Bacteroides sp. D1 s 5 7
Bacteroides sp. D2 s 9 11
Bacteroides dorei 5_1_36/D4 s 4 5
Bacteroides sp. 2_1_22 s 5 7
Bacteroides sp. 2_1_33B s 5 7
Bacteroides sp. 3_1_33FAA s 4 6
Parabacteroides sp. D13 s 4 6
Parabacteroides sp. 20_3 s 5 7
Bacteroides sp. 3_1_23 s 5 7
Bacteroides sp. 3_1_40A s 4 5
Lachnospiraceae bacterium 1_4_56FAA s 4 5
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 10 13
Bacteroides ovatus 3_8_47FAA s 5 7
Bacteroides sp. 3_1_19 s 6 8
Bacteroides sp. D22 s 6 8
Bacteroides sp. 1_1_30 s 5 7
Alistipes indistinctus YIT 12060 s 6 8
Bacteroides oleiciplenus YIT 12058 s 4 5
Dysgonomonas gadei ATCC BAA-286 s 4 6
Bacteroides cellulosilyticus CL02T12C19 s 4 6
Bacteroides dorei CL02T00C15 s 4 5
Bacteroides dorei CL02T12C06 s 4 5
Bacteroides dorei CL03T12C01 s 4 5
Bacteroides nordii CL02T12C05 s 4 5
Bacteroides ovatus CL02T12C04 s 6 8
Bacteroides ovatus CL03T12C18 s 4 6
Bacteroides salyersiae CL02T12C01 s 4 6
Bacteroides xylanisolvens CL03T12C04 s 5 7
Parabacteroides distasonis CL03T12C09 s 4 6
Parabacteroides distasonis CL09T03C24 s 5 7
Parabacteroides goldsteinii CL02T12C30 s 6 8
Parabacteroides johnsonii CL02T12C29 s 6 8
Parabacteroides merdae CL03T12C32 s 6 8
Parabacteroides merdae CL09T00C40 s 6 8
Bacteroides faecis MAJ27 s 5 7
Parabacteroides sp. D25 s 4 6
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 4 6
Paenibacillus mucilaginosus 3016 s 7 9
Parabacteroides distasonis ATCC 8503 s 4 6
Actinomadura madurae LIID-AJ290 s 9 11
Actinoplanes subtropicus s 4 5
Blautia schinkii DSM 10518 s 7 9
Bacteroides thetaiotaomicron s 5 7
Streptomyces scabiei s 5 7
Alteromonas sp. LTR s 4 5
Bacteroides thetaiotaomicron s 6 8
Parabacteroides sp. HGS0025 s 4 5
Parabacteroides gordonii MS-1 s 4 5
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 7 9
Streptomyces scabiei s 5 7
Streptomyces europaeiscabiei s 4 5
Bacteroides ovatus s 6 8
Bacteroides dorei CL03T12C01 s 4 5
Bacteroides ovatus s 6 8
Bacteroides thetaiotaomicron s 4 6
Bacteroides ovatus s 5 7
Bacteroides thetaiotaomicron s 5 7
Streptomyces scabiei s 4 6
Streptomyces scabiei s 4 6
Streptomyces scabiei s 4 6
Streptomyces scabiei s 5 7
Streptomyces scabiei s 5 7
Streptomyces scabiei s 5 7
Streptomyces europaeiscabiei s 4 5
Streptomyces europaeiscabiei s 4 5
Streptomyces sp. 96-12 s 6 8
Opitutaceae bacterium TSB47 s 7 9
Bacteroides xylanisolvens s 5 7
Streptomyces acidiscabies s 4 5
Bacteroides ovatus s 6 8
Bacteroides ovatus s 5 7
Bacteroides xylanisolvens s 4 6
Asanoa hainanensis s 4 6
Bacteroides ovatus s 6 8
Bacteroides faecis MAJ27 s 5 7
Eisenbergiella tayi s 8 10
Eisenbergiella tayi s 9 11
Eisenbergiella tayi s 8 10
Eisenbergiella tayi s 8 10
Eisenbergiella tayi s 9 11
Eisenbergiella tayi s 8 10
Eisenbergiella tayi s 8 10
Bacteroides thetaiotaomicron s 4 6
Eisenbergiella tayi s 9 11
Plantibacter flavus s 4 5
Polaribacter sp. BM10 s 4 5
Streptomyces scabiei s 4 6
Streptomyces scabiei s 4 6
Streptomyces scabiei s 6 8
Bacteroides xylanisolvens s 5 7
Bacteroides xylanisolvens s 5 7
Bacteroides dorei s 4 5
Bacteroides ovatus s 5 7
Parabacteroides distasonis s 5 7
Bacteroides dorei s 4 5
Bacteroides thetaiotaomicron VPI-5482 s 4 6

*p=pathogen;s=symbiont