Genomes encoding eukaryotic-like proteins
PF00595 PDZ domain (Also known as DHR or GLGF)
Copy number in non-pathogens:
Mean=0.71 Stddev=0.90
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
Genome | Class* | ELD score | Number of proteins containing this domain |
---|---|---|---|
Yersinia enterocolitica | s | 4 | 5 |
Shigella sonnei | s | 4 | 5 |
Yersinia bercovieri ATCC 43970 | s | 4 | 5 |
Escherichia coli KTE182 | s | 4 | 5 |
Escherichia coli KTE205 | s | 4 | 5 |
Escherichia coli HVH 213 (4-3042928) | s | 4 | 5 |
Escherichia coli UMEA 3215-1 | s | 4 | 5 |
Dickeya dadantii NCPPB 898 | s | 4 | 5 |
Dickeya dianthicola IPO 980 | s | 4 | 5 |
Dickeya dianthicola NCPPB 453 | s | 4 | 5 |
Dickeya dianthicola NCPPB 3534 | s | 4 | 5 |
Dickeya dadantii NCPPB 3537 | s | 4 | 5 |
Dickeya dianthicola GBBC 2039 | s | 4 | 5 |
Dickeya dadantii subsp. dieffenbachiae NCPPB 2976 | s | 4 | 5 |
Dickeya dadantii 3937 | s | 4 | 5 |
Escherichia coli | s | 4 | 5 |
Escherichia coli | s | 4 | 5 |
Escherichia coli | s | 4 | 5 |
Escherichia coli | s | 4 | 5 |
Salmonella enterica | s | 4 | 5 |
Escherichia coli | s | 4 | 5 |
Escherichia coli | s | 4 | 5 |
*p=pathogen;s=symbiont